Tlyr1_m QTL Report (Mus musculus) - Rat Genome Database

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QTL Registration

QTL: Tlyr1_m (thymic lymphoma resistance 1 (mouse)) Mus musculus

Symbol: Tlyr1_m
Name: thymic lymphoma resistance 1 (mouse)
RGD ID: 1301197
Trait: Not determined
LOD Score: Not Available
P Value: Not Available
Variance: Not Available
Position
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm391920,539,528 - 25,313,796MOUSEQTLGRCm39
GRCm381920,562,164 - 25,336,432MOUSEQTLGRCm38
MGSCv37199,884,543 - 43,884,692 (+)MOUSEQTLGRCm37
MGSCv3198,383,148 - 44,383,148RGD
cM Map1921.34MOUSEQTL
Cross Type: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. Mouse Genome Database (MGD) Mouse Genome Database (MGD)
2. Mouse MP Annotation Import Pipeline RGD automated import pipeline
Additional References at PubMed
PMID:12242666  


Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
733147Tjp2tight junction protein 2192407186024202492Mouse
1317428Cemip2cell migration inducing hyaluronidase 2192175570421835724Mouse
1316719Smc5structural maintenance of chromosomes 5192318381723251286Mouse
1312586Trpm3transient receptor potential cation channel, subfamily M, member 3192211478922972774Mouse
1322094Pip5k1bphosphatidylinositol-4-phosphate 5-kinase, type 1 beta192427215824533236Mouse
1552833Zng1Zn regulated GTPase metalloprotein activator 1192489728024939024Mouse
1553769Gdaguanine deaminase192136867121450025Mouse
1553293Apba1amyloid beta precursor protein binding family A member 1192373617023926961Mouse
1550343Klf9Kruppel-like transcription factor 9192311859023145493Mouse
1551056Tmc1transmembrane channel-like gene family 1192076082020931566Mouse
1610256Pip5k1bosphosphatidylinositol-4-phosphate 5-kinase, type 1 beta, opposite strand192439337324426549Mouse
1551716Fxnfrataxin192423690924257954Mouse
16074014930554I06RikRIKEN cDNA 4930554I06 gene192108207421082902Mouse
1609152C330002G04RikRIKEN cDNA C330002G04 gene192295611123053270Mouse
1607685Mir204microRNA 204192272796922728036Mouse
1332089Aldh1a1aldehyde dehydrogenase family 1, subfamily A1192046994720620827Mouse
1615106Cfap95cilia and flagella associated protein 95192353612423630176Mouse
1317470Pgm5phosphoglucomutase 5192465562524839206Mouse
1614939Tmem252transmembrane protein 252192465137224657025Mouse
1613842Gm6684predicted pseudogene 6684192056327720564190Mouse
1614634Gm6563predicted pseudogene 6563192365317523654099Mouse
16143821110059E24RikRIKEN cDNA 1110059E24 gene192157467721630155Mouse
1614459Foxd4forkhead box D4192487630724878380Mouse
16108972410080I02RikRIKEN cDNA 2410080I02 gene192311185923114475Mouse
1617498Ptar1protein prenyltransferase alpha subunit repeat containing 1192366472823710249Mouse
1313163Abhd17babhydrolase domain containing 17B192163048321663002Mouse
1621166Nsa2-ps1NSA2 ribosome biogenesis homolog, pseudogene 1192241837122421017Mouse
1621167Ldhb-pslactate dehydrogenase B, pseudogene192191464721915931Mouse
1321875Zfand5zinc finger, AN1-type domain 5192124915021264204Mouse
1317066Dock8dedicator of cytokinesis 8192497675325179796Mouse
1621198Entrep1endosomal transmembrane epsin interactor 1192395011424008800Mouse
1618240Kank1KN motif and ankyrin repeat domains 1192521414625411861Mouse
1312981Mamdc2MAM domain containing 2192327997323425855Mouse
1321150Pabir1PP2A A alpha (PPP2R1A) and B55A (PPP2R2A) interacting phosphatase regulator 1192445127024454819Mouse
1621576Aldh1a7aldehyde dehydrogenase family 1, subfamily A7192067031820704920Mouse
2295872Gm10053predicted gene 10053192485299024854239Mouse
2295536Gm8789predicted gene 8789192426636424268272Mouse
2299701Gm3775predicted gene 3775192109855521103069Mouse
2308268Ndufb4bNADH:ubiquinone oxidoreductase subunit B4B192501047225010942Mouse
2308298Gm9493predicted gene 9493192359705923597717Mouse
4869695Mir1192microRNA 1192192312679523126915Mouse
5142597Gm18951predicted gene, 18951192181493521816075Mouse
5143773Gm17800predicted gene, 17800192466959724670755Mouse
7495735Mir3084-1microRNA 3084-1192491959924919667Mouse
9593410Gm33755predicted gene, 33755192223736422237968Mouse
9615175Gm32979predicted gene, 32979192111463121123803Mouse
9603982Gm34235predicted gene, 34235192507023025073857Mouse
9678805Gm34012predicted gene, 34012192347412823500416Mouse
9649322Gm33649predicted gene, 33649192245282222589668Mouse
9651042Gm32750predicted gene, 32750192091922920932126Mouse
9651085Gm34076predicted gene, 34076192387138423934139Mouse
9658631Gm34186predicted gene, 34186192513059525133284Mouse
9657274Gm33950predicted gene, 33950192324812523251723Mouse
10001519Gm27151predicted gene 27151192241341722425946Mouse
10017111Gm41823predicted gene, 41823192402174724024521Mouse
10031461Gm38486predicted gene, 38486192153780321573566Mouse
10033045Gm41818predicted gene, 41818192169118321711760Mouse
10035961Gm41824predicted gene, 41824192405829524068289Mouse
10028288Gm41821predicted gene, 41821192327729423287018Mouse
10028900Gm38581predicted gene, 38581192468460924694710Mouse
12798325Gm45918predicted gene, 45918192113929521188061Mouse
14996032Gm22144predicted gene, 22144192362077323620874Mouse
14996882Gm50341predicted gene, 50341192453369624534774Mouse
15019997Gm52405predicted gene, 52405192483237824836210Mouse
15018771Gm52399predicted gene, 52399192445535324479227Mouse
15000231Gm24252predicted gene, 24252192514344925143580Mouse
14998517Gm22506predicted gene, 22506192221288522212982Mouse
14999030Gm24263predicted gene, 24263192327369323273799Mouse
39129464Gm54056predicted gene, 54056192401328224015115Mouse
39130793LOC110120568VISTA enhancer mm1562192114178121144814Mouse
39129626Gm54055predicted gene, 54055192266809122698422Mouse
39130049LOC109280036VISTA enhancer mm269192125144821252207Mouse
39128829C19H9orf57chromosome 19 C9orf57 homolog192152959721535231Mouse
39128537LOC114827932VISTA enhancer mm1610192176115021763506Mouse
39130264Gm57661predicted gene, 57661192124882221250106Mouse
163676654LOC128927908CapStarr-seq enhancer MGSCv37_chr19:21219297-21219406192112217121122280Mouse
163686268LOC128927909CapStarr-seq enhancer MGSCv37_chr19:25126893-25127076192502976725029950Mouse
401703529LOC131391049STARR-seq mESC enhancer starr_45760192309647923097529Mouse
401703474LOC131391046STARR-seq mESC enhancer starr_45755192306303723066026Mouse
401703401LOC131391037STARR-seq mESC enhancer starr_45727192157868121579706Mouse
401703174LOC131391060STARR-seq mESC enhancer starr_45785192403711024039297Mouse
401702411LOC131391028STARR-seq mESC enhancer starr_45716192104263021044730Mouse
401702798LOC131391036STARR-seq mESC enhancer starr_45726192148431321485855Mouse
401701003LOC131391038STARR-seq mESC enhancer starr_45737192176594921767598Mouse
401702242LOC131391044STARR-seq mESC enhancer starr_45746192280045222801888Mouse
401700634LOC131391055STARR-seq mESC enhancer starr_45774192344460023446094Mouse
401701246LOC131391025STARR-seq mESC enhancer starr_45712192092146720922765Mouse
401703266LOC131391039STARR-seq mESC enhancer starr_45738192176788321769743Mouse
401700709LOC131391018STARR-seq mESC enhancer starr_45704192055036420551332Mouse
401702541LOC131391023STARR-seq mESC enhancer starr_45709192090046920903187Mouse
401700923LOC131391034STARR-seq mESC enhancer starr_45724192135845621359957Mouse
401715601LOC131391065STARR-seq mESC enhancer starr_45802192446864524470194Mouse
401715603LOC131391073STARR-seq mESC enhancer starr_45819192529614225299046Mouse
401715258LOC131391020STARR-seq mESC enhancer starr_45706192081630420817804Mouse
401713011LOC131391031STARR-seq mESC enhancer starr_45720192114918221150695Mouse
401714929LOC131391019STARR-seq mESC enhancer starr_45705192073180520733078Mouse
401713441LOC131391027STARR-seq mESC enhancer starr_45715192101702821018826Mouse
401714952LOC131391056STARR-seq mESC enhancer starr_45776192349762423498793Mouse
401715514LOC131391045STARR-seq mESC enhancer starr_45752192305213523054398Mouse
401714240LOC131391058STARR-seq mESC enhancer starr_45778192363432623635734Mouse
401715154LOC131391050STARR-seq mESC enhancer starr_45763192311002523111786Mouse
401713896LOC131391070STARR-seq mESC enhancer starr_45809192498249624983876Mouse
401711229LOC131391053STARR-seq mESC enhancer starr_45772192315746723158633Mouse
401712430LOC131391069STARR-seq mESC enhancer starr_45808192491239924913896Mouse
401709937LOC131391064STARR-seq mESC enhancer starr_45796192420049124203719Mouse
401711095LOC131391021STARR-seq mESC enhancer starr_45707192082046320821376Mouse
401709753LOC131391026STARR-seq mESC enhancer starr_45713192094726520948401Mouse
401712656LOC131391029STARR-seq mESC enhancer starr_45717192107637221078601Mouse
401710159LOC131391032STARR-seq mESC enhancer starr_45722192119514521196301Mouse
401711140LOC131391061STARR-seq mESC enhancer starr_45786192404133824042501Mouse
401710614LOC131391066STARR-seq mESC enhancer starr_45804192453763424539300Mouse
401712144LOC131391041STARR-seq mESC enhancer starr_45741192208629422088148Mouse
401708431LOC131391051STARR-seq mESC enhancer starr_45766192312889323130682Mouse
401708049LOC131391052STARR-seq mESC enhancer starr_45769192314555023148423Mouse
401709023LOC131391071STARR-seq mESC enhancer starr_45812192516324325164827Mouse
401707913LOC131391033STARR-seq mESC enhancer starr_45723192132349121324926Mouse
401708706LOC131391040STARR-seq mESC enhancer starr_45740192187143421873355Mouse
401707562LOC131391063STARR-seq mESC enhancer starr_45793192417407524175735Mouse
401706639LOC131391024STARR-seq mESC enhancer starr_45711192091481820916142Mouse
401705684LOC131391047STARR-seq mESC enhancer starr_45757192306686623068376Mouse
401706469LOC131391054STARR-seq mESC enhancer starr_45773192329641923297626Mouse
401704032LOC131391022STARR-seq mESC enhancer starr_45708192082295920824802Mouse
401705187LOC131391042STARR-seq mESC enhancer starr_45742192217842122179546Mouse
401706544LOC131391068STARR-seq mESC enhancer starr_45806192464812624650464Mouse
401704286LOC131391035STARR-seq mESC enhancer starr_45725192143305721435171Mouse
401704102LOC131391048STARR-seq mESC enhancer starr_45759192307083123073029Mouse
401704107LOC131391062STARR-seq mESC enhancer starr_45787192406513524066783Mouse
401705271LOC131391030STARR-seq mESC enhancer starr_45718192108539921087021Mouse
401716560LOC131391057STARR-seq mESC enhancer starr_45777192351465023515914Mouse
401715819LOC131391043STARR-seq mESC enhancer starr_45744192225625122257573Mouse
401716010LOC131391067STARR-seq mESC enhancer starr_45805192456252424564454Mouse
401716032LOC131391072STARR-seq mESC enhancer starr_45817192520487025206874Mouse
401716242LOC131391059STARR-seq mESC enhancer starr_45783192394544523946809Mouse
401833096LOC132445112STARR-positive B cell enhancer ABC_E9993192172481021725110Mouse
401834530LOC132445119STARR-positive B cell enhancer ABC_E7639192493894224939243Mouse
401833689LOC132445121STARR-positive B cell enhancer ABC_E1974192503982025040121Mouse
401836204LOC132445111STARR-positive B cell enhancer mm9_chr19:21788111-21788412192169098521691286Mouse
401835716LOC132445118STARR-positive B cell enhancer mm9_chr19:25033055-25033356192493592924936230Mouse
401835908LOC132445110STARR-positive B cell enhancer mm9_chr19:21727198-21727499192163007221630373Mouse
401836447LOC132445117STARR-positive B cell enhancer ABC_E8743192484875824849059Mouse
401836506LOC132445115STARR-positive B cell enhancer mm9_chr19:23348377-23348678192325125123251552Mouse
401837521LOC132445114STARR-positive B cell enhancer ABC_E4273192311796423118265Mouse
401837644LOC132445120STARR-positive B cell enhancer ABC_E5693192494356524943866Mouse
401841518LOC132445116STARR-positive B cell enhancer ABC_E5692192427833524278636Mouse
401840498LOC132445113STARR-positive B cell enhancer ABC_E9994192175548221755782Mouse

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4142161Drinksac2_mdrink saccharin 2 (mouse)Not determined120695286Mouse
4142302Nstr1_mnerve sheath tumor resistance QTL 1 (mouse)Not determined19122371338Mouse
1301271Datd_mdopamine transporter density (mouse)Not determined19132340234Mouse
4142406Pbctlp1_mperipheral blood cytotoxic T lymphocyte percentage 1 (mouse)Not determined132875174Mouse
1300904Chab5_mcholesterol absorption 5 (mouse)Not determined19165376435653927Mouse
26884385Skwq14_mskull length QTL 14, 16 week (mouse)19325000035877400Mouse
1301800Faq10_mfluctuating asymmetry QTL 10 (mouse)Not determined19332321637323348Mouse
1300923Bits4_mbitterness sensitivity 4 (mouse)Not determined19332321637323348Mouse
1302126Skull26_mskull morphology 26 (mouse)Not determined19332321637323348Mouse
1300591Pas3_mpulmonary adenoma susceptibility 3 (mouse)Not determined19332321637323348Mouse
1357819Tgct2_mtesticular germ cell tumor 2 (mouse)Not determined19332855120539663Mouse
11039522Tbbr4_mTrypanosoma brucei brucei response 4 (mouse)19531332639313470Mouse
1301228Iba4_minduction of brown adipocytes 4 (mouse)Not determined19930571543305821Mouse
1302019Pgia23_mproteoglycan induced arthritis 23 (mouse)Not determined19978745343787602Mouse
14928311Manh85_mmandible shape 85 (mouse)191191478945914789Mouse
12801464Rta2_mretinal aging 2 (mouse)141230287425302874Mouse
10413881Moe2_mmodifier of epilepsy 2 (mouse)191492301648923138Mouse
1301336Alcp23_malcohol preference locus 23 (mouse)Not determined191591260749912719Mouse
1301633Alcp24_malcohol preference locus 24 (mouse)Not determined191591260749912719Mouse
1302063Eae19_mexperimental allergic encephalomyelitis 19 (mouse)Not determined191829516252295381Mouse
1302004Lfp2_mlong free running period 2 (mouse)Not determined191829516252295381Mouse
4142343Moen2_mmodifier of engrailed QTL 2 (mouse)Not determined192023431454234461Mouse
10412251Mnp_mmodifier of Niemann Pick type C1 (mouse)Not determined192023431454234461Mouse
1301197Tlyr1_mthymic lymphoma resistance 1 (mouse)Not determined192053952825313796Mouse
4141659Pbwg20_mpostnatal body weight growth 20 (mouse)Not determined192137870555378928Mouse
1357596Tgct3_mtesticular germ cell tumor 3 (mouse)Not determined192198409132912719Mouse
1558876W3q14_mweight 3 weeks QTL 14 (mouse)Not determined192231332653911504Mouse
12790634Ebm1_mEpidermolysis Bullosa modifier 1 (mouse)192498843958988439Mouse
1302123Tlsr8_mthymic lymphoma suppressor region 8 (mouse)Not determined192513600242388916Mouse


Additional Information

Database Acc Id Source(s)
MGD MGI:2651474

RGD Curation Notes
Note Type Note Reference