Lith10_m QTL Report (Mus musculus) - Rat Genome Database

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QTL Registration

QTL: Lith10_m (lithogenic gene 10 (mouse)) Mus musculus

Symbol: Lith10_m
Name: lithogenic gene 10 (mouse)
RGD ID: 1301178
Trait: Not determined
LOD Score: Not Available
P Value: Not Available
Variance: Not Available
Position
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm3961 - 21,465,015MOUSEQTLGRCm39
GRCm3861 - 21,465,015MOUSEQTLGRCm38
MGSCv3761 - 21,415,015 (+)MOUSEQTLGRCm37
MGSCv360 - 35,302,810RGD
cM Map61.81MOUSEQTL
Cross Type: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. Mouse Genome Database (MGD) Mouse Genome Database (MGD)
2. Mouse MP Annotation Import Pipeline RGD automated import pipeline
Additional References at PubMed
PMID:12810825  


Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
401838990LOC132411328STARR-positive B cell enhancer mm9_chr6:3000596-3000897630505963050897Mouse
2310458Vmn1r-ps5vomeronasal 1 receptor, pseudogene 5630721803073073Mouse
2310456Vmn1r-ps6vomeronasal 1 receptor, pseudogene 6631075033108486Mouse
401711367LOC131371248STARR-seq mESC enhancer starr_14981631205103123382Mouse
4861080Vmn1r261vomeronasal 1 receptor 261631436443144564Mouse
401709588LOC131371249STARR-seq mESC enhancer starr_14982631515563153021Mouse
401716507LOC131371250STARR-seq mESC enhancer starr_14983631582823161018Mouse
401837909LOC132411329STARR-positive B cell enhancer mm9_chr6:3134028-3134329631840283184329Mouse
5142487Gm19064predicted gene, 19064631969063197629Mouse
2308273Gm2651predicted gene 2651632078693208704Mouse
401709652LOC131371251STARR-seq mESC enhancer starr_14985632658993269254Mouse
1620190Gm8579predicted gene 8579632885193317019Mouse
5143334Gm18222predicted gene, 18222633185083319924Mouse
14700771Gm20559predicted gene, 20559633307383342209Mouse
401715397LOC131371252STARR-seq mESC enhancer starr_14986633433263345083Mouse
401833018LOC132411330STARR-positive B cell enhancer ABC_E9269633458863346186Mouse
401715984LOC131371253STARR-seq mESC enhancer starr_14987633653763366694Mouse
1557974Samd9lsterile alpha motif domain containing 9-like633722573399458Mouse
401716372LOC131371254STARR-seq mESC enhancer starr_14988633837543384657Mouse
401714138LOC131371255STARR-seq mESC enhancer starr_14989633955513397559Mouse
401833128LOC132411331STARR-positive B cell enhancer mm9_chr6:3349393-3349694633993933399694Mouse
401710410LOC131371256STARR-seq mESC enhancer starr_14990634043403405807Mouse
401706540LOC131371257STARR-seq mESC enhancer starr_14991634243623426792Mouse
401838517LOC132411332STARR-positive B cell enhancer ABC_E6412634474343447735Mouse
1313878Hepacam2HEPACAM family member 2634572023498319Mouse
401833694LOC132411333STARR-positive B cell enhancer ABC_E9270634982273498527Mouse
1312377Vps50VPS50 EARP/GARPII complex subunit634983933603531Mouse
401711126LOC131371258STARR-seq mESC enhancer starr_14997635566093558144Mouse
15021872Gm52885predicted gene, 52885635621333570578Mouse
401710256LOC131371259STARR-seq mESC enhancer starr_14998636235953624132Mouse
401717003LOC131371260STARR-seq mESC enhancer starr_14999636567263658155Mouse
39129494Gm53306predicted gene, 53306636723693684749Mouse
401701174LOC131371261STARR-seq mESC enhancer starr_15001636736203675175Mouse
401703651LOC131371262STARR-seq mESC enhancer starr_15002636774383679189Mouse
10276Calcrcalcitonin receptor636856783764713Mouse
2314077Mir653microRNA 653637213013721385Mouse
1608178Mir489microRNA 489637218973722003Mouse
9648296Gm33576predicted gene, 33576637637993807425Mouse
401708466LOC131371263STARR-seq mESC enhancer starr_15003638079813809769Mouse
15001390Gm44221predicted gene, 44221638630303863464Mouse
401714096LOC131371264STARR-seq mESC enhancer starr_15005638742073876973Mouse
736799Tfpi2tissue factor pathway inhibitor 2639625893988977Mouse
401710900LOC131371265STARR-seq mESC enhancer starr_15006639696443970621Mouse
1621627Gngt1guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1639890823997441Mouse
731706Gng11guanine nucleotide binding protein (G protein), gamma 11640039874008445Mouse
16134414930528H21RikRIKEN cDNA 4930528H21 gene640318414047584Mouse
735305Bet1Bet1 golgi vesicular membrane trafficking protein640768994086930Mouse
401833094LOC132411334STARR-positive B cell enhancer ABC_E11732640868354087135Mouse
401716899LOC131371266STARR-seq mESC enhancer starr_15007640897374093246Mouse
401704956LOC131371267STARR-seq mESC enhancer starr_15008641165094119684Mouse
401700470LOC131371268STARR-seq mESC enhancer starr_15009641903684192204Mouse
401716865LOC131371269STARR-seq mESC enhancer starr_15010642818604283044Mouse
6771317Gm8602predicted gene 8602643590244359892Mouse
39130375LOC11856743260S acidic ribosomal protein P1-like643896084391241Mouse
9614360Gm33788predicted gene, 33788644215374446272Mouse
401713703LOC131371270STARR-seq mESC enhancer starr_15011644270694428324Mouse
12795796Gm46948predicted gene, 46948644389654465277Mouse
15017834Gm52942predicted gene, 52942644678494468000Mouse
39129634LOC109279945VISTA enhancer mm398644834634485322Mouse
39130008Gm53308predicted gene, 53308644850184486569Mouse
401712469LOC131371271STARR-seq mESC enhancer starr_15013644960144497458Mouse
39130013Gm53307predicted gene, 53307644973654507872Mouse
730985Col1a2collagen, type I, alpha 2645056184541543Mouse
401705844LOC131371272STARR-seq mESC enhancer starr_15014645496364551510Mouse
39129372LOC109279946VISTA enhancer mm400645535374555066Mouse
5143272Gm18289predicted gene, 18289645708794571728Mouse
9657549Gm33959predicted gene, 33959645843454587092Mouse
1619011Casd1CAS1 domain containing 1646009114643355Mouse
10040672Gm38761predicted gene, 38761646545544661370Mouse
1553181Sgcesarcoglycan, epsilon646743504747180Mouse
401709566LOC131371273STARR-seq mESC enhancer starr_15017646764774678449Mouse
401708076LOC131371274STARR-seq mESC enhancer starr_15018646842314686235Mouse
401713940LOC131371275STARR-seq mESC enhancer starr_15019647324614736315Mouse
1621381Peg10paternally expressed 10647473064760517Mouse
39131169Gm51408predicted gene, 51408647952234805994Mouse
9625982Gm20714predicted gene 20714648070554816328Mouse
401715757LOC131371276STARR-seq mESC enhancer starr_15022648918744893777Mouse
2295263Gmfg-psglia maturation factor, gamma, pseudogene648932934893868Mouse
1552999Ppp1r9aprotein phosphatase 1, regulatory subunit 9A649027025165661Mouse
401834614LOC132411335STARR-positive B cell enhancer mm9_chr6:4873843-4874143649238434924143Mouse
401706860LOC131371277STARR-seq mESC enhancer starr_15028650169715022336Mouse
15020218Gm52886predicted gene, 52886650460625054688Mouse
401712445LOC131371278STARR-seq mESC enhancer starr_15032651185745120459Mouse
12793839Gm46949predicted gene, 46949651512375154012Mouse
733240Pon1paraoxonase 1651681015193824Mouse
1552156Pon3paraoxonase 3652162535256236Mouse
401704736LOC131371279STARR-seq mESC enhancer starr_15033652163345219709Mouse
1551394Pon2paraoxonase 2652646205298408Mouse
401832985LOC132411336STARR-positive B cell enhancer ABC_E3642652976765297977Mouse
401705242LOC131371280STARR-seq mESC enhancer starr_15035652984165301906Mouse
401841839LOC132411337STARR-positive B cell enhancer ABC_E8094653151655315466Mouse
401712859LOC131371281STARR-seq mESC enhancer starr_15037653236425326767Mouse
10015332Gm38762predicted gene, 38762653623155373027Mouse
401706719LOC131371282STARR-seq mESC enhancer starr_15042653735955375126Mouse
1557659Asb4ankyrin repeat and SOCS box-containing 4653833865433022Mouse
401714255LOC131371283STARR-seq mESC enhancer starr_15044653849865388998Mouse
401709157LOC131371284STARR-seq mESC enhancer starr_15047654692085470996Mouse
401713900LOC131371285STARR-seq mESC enhancer starr_15048654812075483396Mouse
69114Pdk4pyruvate dehydrogenase kinase, isoenzyme 4654833515496278Mouse
401716460LOC131371286STARR-seq mESC enhancer starr_15049654958795497501Mouse
401710713LOC131371287STARR-seq mESC enhancer starr_15050655249405526382Mouse
9657562Gm34470predicted gene, 34470655636635570318Mouse
401704784LOC131371288STARR-seq mESC enhancer starr_15051655762145577834Mouse
401708528LOC131371289STARR-seq mESC enhancer starr_15052655823295584971Mouse
12797698Gm46983predicted gene, 46983656437475645853Mouse
401711879LOC131371290STARR-seq mESC enhancer starr_15053656720455674380Mouse
401707947LOC131371291STARR-seq mESC enhancer starr_15054657071395710009Mouse
1332553Dync1i1dynein cytoplasmic 1 intermediate chain 1657257726028030Mouse
9627864Gm34527predicted gene, 34527658064285820036Mouse
401716150LOC131371292STARR-seq mESC enhancer starr_15057658094025810909Mouse
401703339LOC131371293STARR-seq mESC enhancer starr_15058658202885822041Mouse
401717168LOC131371294STARR-seq mESC enhancer starr_15059658821675884168Mouse
16103251700019G24RikRIKEN cDNA 1700019G24 gene659638975977393Mouse
401704921LOC131371295STARR-seq mESC enhancer starr_15060659645585965789Mouse
1323001Slc25a13solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13660412186217304Mouse
401702919LOC131371296STARR-seq mESC enhancer starr_15067661336326134094Mouse
401709908LOC131371297STARR-seq mESC enhancer starr_15070661385966141375Mouse
401712695LOC131371298STARR-seq mESC enhancer starr_15079661974316198529Mouse
401711815LOC131371299STARR-seq mESC enhancer starr_15081662066616209321Mouse
401707414LOC131371300STARR-seq mESC enhancer starr_15083662118236213459Mouse
9620282Gm20619predicted gene 20619662486596377422Mouse
401706266LOC131371301STARR-seq mESC enhancer starr_15084663056856308785Mouse
9679179Gm34749predicted gene, 34749663121516323337Mouse
1619349Gm8649predicted gene 8649663297326330765Mouse
2295800Gm8652predicted gene 8652663509926352147Mouse
401715078LOC131371302STARR-seq mESC enhancer starr_15085663663596367416Mouse
15022285Gm52888predicted gene, 52888663902356399601Mouse
401708897LOC131371303STARR-seq mESC enhancer starr_15086664694726470851Mouse
1616831Sem1SEM1, 26S proteasome complex subunit665582756578658Mouse
15017292Gm52889predicted gene, 52889665613356565484Mouse
10000267Gm20618predicted gene 20618666324796682088Mouse
5143561Gm18006predicted gene, 18006666453336647279Mouse
39131101Gm53309predicted gene, 53309666662206681981Mouse
2295132Gm5873predicted gene 5873667353696736549Mouse
15020327Gm52890predicted gene, 52890667376786747807Mouse
9597825Gm34871predicted gene, 34871667494836805839Mouse
401706423LOC131371304STARR-seq mESC enhancer starr_15087667810016781814Mouse
2290525Dlx6os1distal-less homeobox 6, opposite strand 1668205436871627Mouse
1557991Dlx6distal-less homeobox 6668632726867965Mouse
1621632Dlx6os2distal-less homeobox 6, opposite strand 2668637976865150Mouse
10476Dlx5distal-less homeobox 5668778016882068Mouse
39129248Gm53323predicted gene, 53323668841866903442Mouse
15000998Gm22155predicted gene, 22155669241166924279Mouse
401707805LOC131371305STARR-seq mESC enhancer starr_15088669506786952213Mouse
1550129Sdhaf3succinate dehydrogenase complex assembly factor 3669560047039661Mouse
1618529Gm8669predicted gene 8669671941147195122Mouse
401701118LOC131371306STARR-seq mESC enhancer starr_15089672565967259927Mouse
11084466Gm19272predicted gene, 19272673019197379577Mouse
401702287LOC131371307STARR-seq mESC enhancer starr_15092674416877443424Mouse
11379Tac1tachykinin 1675550617562978Mouse
9631890Gm35051predicted gene, 35051676275257666605Mouse
2310751Gm8676predicted gene 8676676438497644594Mouse
619559Asnsasparagine synthetase676751697693209Mouse
401716828LOC131371308STARR-seq mESC enhancer starr_15097676931957695173Mouse
401701004LOC131371309STARR-seq mESC enhancer starr_15099677064357707929Mouse
401712835LOC131371310STARR-seq mESC enhancer starr_15100677115397712764Mouse
401711708LOC131371311STARR-seq mESC enhancer starr_15101677435457745181Mouse
401705399LOC131371312STARR-seq mESC enhancer starr_15102677456447746879Mouse
16134951700012J15RikRIKEN cDNA 1700012J15 gene677663497778030Mouse
9620473Gm35194predicted gene, 35194678091967818035Mouse
1618514Gm8686predicted gene 8686678350997835765Mouse
401837501LOC132411338STARR-positive B cell enhancer ABC_E1063678444247844725Mouse
732030C1galt1core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1678452247872042Mouse
401833556LOC132411339STARR-positive B cell enhancer ABC_E3643678467867847087Mouse
9627715Gm35246predicted gene, 35246679010867945346Mouse
401706208LOC131371313STARR-seq mESC enhancer starr_15106679407177945615Mouse
9680797Gm35446predicted gene, 35446679808107998585Mouse
2307988Rnps1-psRNA binding protein with serine rich domain 1, pseudogene679818147983438Mouse
1618185Col28a1collagen, type XXVIII, alpha 1679971008193709Mouse
9671170Gm35384predicted gene, 35384679999188000509Mouse
401714178LOC131371314STARR-seq mESC enhancer starr_15110681658388167245Mouse
401715987LOC131371315STARR-seq mESC enhancer starr_15111681848798185915Mouse
401705800LOC131371316STARR-seq mESC enhancer starr_15112682084078210143Mouse
1318197Miosmeiosis regulator for oocyte development682091118240573Mouse
1315636Rpa3replication protein A3682559368259141Mouse
401834822LOC132411340STARR-positive B cell enhancer ABC_E1064682590398259340Mouse
2307247Umad1UMAP1-MVP12 associated (UMA) domain containing 1682592888428767Mouse
401832428LOC132411341STARR-positive B cell enhancer mm9_chr6:8225128-8225429682751288275429Mouse
12797097Gm46952predicted gene, 46952683338428345576Mouse
401714466LOC131371317STARR-seq mESC enhancer starr_15115683342638336101Mouse
401702563LOC131371318STARR-seq mESC enhancer starr_15116683449258346237Mouse
401701064LOC131371319STARR-seq mESC enhancer starr_15117683526688354575Mouse
2311775Gm8428predicted gene 8428683774438379409Mouse
163704142LOC128925403CapStarr-seq enhancer MGSCv37_chr6:8435517-8436018684855178486018Mouse
15001719Gm26075predicted gene, 26075685012368501356Mouse
1619711A430035B10RikRIKEN cDNA A430035B10 gene685070598509161Mouse
401833338LOC132411342STARR-positive B cell enhancer ABC_E126685090978509398Mouse
1620649Glcci1glucocorticoid induced transcript 1685096008597549Mouse
15020390Gm52941predicted gene, 52941685502098550382Mouse
3977245Gm16042predicted gene 16042685953178597052Mouse
9667730Gm35621predicted gene, 35621686233078624840Mouse
733653Ica1islet cell autoantigen 1686305278778531Mouse
401842100LOC132411343STARR-positive B cell enhancer ABC_E11313686319778632277Mouse
401841037LOC132411344STARR-positive B cell enhancer ABC_E8826686486068648907Mouse
401708960LOC131371320STARR-seq mESC enhancer starr_15122686600448663208Mouse
39129551Gm53310predicted gene, 53310686831628728922Mouse
401840297LOC132411345STARR-positive B cell enhancer ABC_E8827686873868687687Mouse
401837929LOC132411346STARR-positive B cell enhancer ABC_E9660686912558691555Mouse
401716135LOC131371321STARR-seq mESC enhancer starr_15123686944468696598Mouse
39131222Gm53311predicted gene, 53311687057488720538Mouse
401834285LOC132411347STARR-positive B cell enhancer ABC_E8990687365288736828Mouse
401708826LOC131371322STARR-seq mESC enhancer starr_15124687487718750669Mouse
401708438LOC131371323STARR-seq mESC enhancer starr_15125687700288771790Mouse
10008949Gm38765predicted gene, 38765688062638814118Mouse
9614734Gm35674predicted gene, 35674688931068912473Mouse
11024Nxph1neurexophilin 1689481549259863Mouse
401706978LOC131371324STARR-seq mESC enhancer starr_15127689560998957652Mouse
401701966LOC131371325STARR-seq mESC enhancer starr_15129690794299081207Mouse
401703813LOC131371326STARR-seq mESC enhancer starr_15130694381589439213Mouse
401716864LOC131371327STARR-seq mESC enhancer starr_15131696032119604476Mouse
401709098LOC131371328STARR-seq mESC enhancer starr_15132696427289644905Mouse
401710570LOC131371329STARR-seq mESC enhancer starr_15133696453589646341Mouse
401704590LOC131371330STARR-seq mESC enhancer starr_15134696540849657169Mouse
401702705LOC131371331STARR-seq mESC enhancer starr_15135698449939846495Mouse
401708333LOC131371332STARR-seq mESC enhancer starr_15136698703979872041Mouse
401717280LOC131371333STARR-seq mESC enhancer starr_1513761009026110093239Mouse
7488545n-TVcac5nuclear encoded tRNA valine 5 (anticodon CAC)61010037110100443Mouse
2309835Gm5110predicted gene 511061017165510172908Mouse
401703172LOC131371334STARR-seq mESC enhancer starr_1513861018541110186768Mouse
401706708LOC131371335STARR-seq mESC enhancer starr_1513961028495210286450Mouse
5143135Gm18421predicted gene, 1842161033428910334961Mouse
401715412LOC131371336STARR-seq mESC enhancer starr_1514061036007610361612Mouse
401712273LOC131371337STARR-seq mESC enhancer starr_1514161038502910386339Mouse
401709328LOC131371338STARR-seq mESC enhancer starr_1514261042390110425587Mouse
401704949LOC131371339STARR-seq mESC enhancer starr_1514361053785310539268Mouse
401702794LOC131371340STARR-seq mESC enhancer starr_1514461054303510545044Mouse
2310101Gm2691predicted gene 269161077415910774871Mouse
401709186LOC131371341STARR-seq mESC enhancer starr_1514661078606310787453Mouse
5143078Gm18481predicted gene, 1848161080145310802055Mouse
15003076Gm26058predicted gene, 2605861084058710840693Mouse
401714828LOC131371342STARR-seq mESC enhancer starr_1514761086025410862196Mouse
401704977LOC131371343STARR-seq mESC enhancer starr_1514861088017710881867Mouse
2310664Gm8744predicted gene 874461088243710888601Mouse
401707844LOC131371344STARR-seq mESC enhancer starr_1514961090647510908231Mouse
1610919AA545190EST AA54519061097146710974377Mouse
401711607LOC131371345STARR-seq mESC enhancer starr_1515261110796911109272Mouse
401714142LOC131371346STARR-seq mESC enhancer starr_1515361118649111190946Mouse
401714648LOC131371347STARR-seq mESC enhancer starr_1515461123060411232073Mouse
401704713LOC131371348STARR-seq mESC enhancer starr_1515561123749711241263Mouse
401707145LOC131371349STARR-seq mESC enhancer starr_1515661132803211328773Mouse
401705970LOC131371350STARR-seq mESC enhancer starr_1515761136577611367119Mouse
401710009LOC131371351STARR-seq mESC enhancer starr_1515861139392511395430Mouse
401715494LOC131371352STARR-seq mESC enhancer starr_1515961140724111408132Mouse
401709095LOC131371353STARR-seq mESC enhancer starr_1516161151379111515260Mouse
401700778LOC131371354STARR-seq mESC enhancer starr_1516261154214211544458Mouse
401701354LOC131371355STARR-seq mESC enhancer starr_1516361164633411647392Mouse
401711042LOC131371356STARR-seq mESC enhancer starr_1516461174871111749654Mouse
1615952Ndufa4Ndufa4, mitochondrial complex associated61190037111907449Mouse
1557742Phf14PHD finger protein 1461190772812100155Mouse
401701244LOC131371357STARR-seq mESC enhancer starr_1516661196900411971449Mouse
401701915LOC131371358STARR-seq mESC enhancer starr_1516861207285812073949Mouse
401702672LOC131371359STARR-seq mESC enhancer starr_1516961209129412092814Mouse
1623493Gm6578predicted gene 657861209951712109579Mouse
401708834LOC131371360STARR-seq mESC enhancer starr_1517061210610512108273Mouse
401709072LOC131371361STARR-seq mESC enhancer starr_1517261212607012127578Mouse
9597442Gm32222predicted gene, 3222261212862512128965Mouse
9591548Gm35961predicted gene, 3596161216766612212429Mouse
401709899LOC131371362STARR-seq mESC enhancer starr_1517461224412412244965Mouse
1623698Thsd7athrombospondin, type I, domain containing 7A61231160712749252Mouse
401708861LOC131371363STARR-seq mESC enhancer starr_1517561237888312380225Mouse
401701469LOC131371364STARR-seq mESC enhancer starr_1517661241687312417834Mouse
10005136Gm38583predicted gene, 3858361243687012478331Mouse
401709583LOC131371365STARR-seq mESC enhancer starr_1517761246514312466479Mouse
401701286LOC131371366STARR-seq mESC enhancer starr_1517861254048212542146Mouse
5144963Gm16123predicted gene 1612361256565712566905Mouse
401701471LOC131371367STARR-seq mESC enhancer starr_1517961260717812609027Mouse
401715134LOC131371368STARR-seq mESC enhancer starr_1518261264594412647947Mouse
401704023LOC131371369STARR-seq mESC enhancer starr_1518461281306712817336Mouse
401709184LOC131371370STARR-seq mESC enhancer starr_1518561282010712820320Mouse
2299043Gm15529predicted gene 1552961285730112858592Mouse
5143337Gm18221predicted gene, 1822161287418712874588Mouse
401705797LOC131371371STARR-seq mESC enhancer starr_1518861287606512877763Mouse
2295773Gm5300predicted gene 530061305539413056614Mouse
401834498LOC132411348STARR-positive B cell enhancer ABC_E1036961306164713061947Mouse
1550447Tmem106btransmembrane protein 106B61306975813089268Mouse
401702360LOC131371372STARR-seq mESC enhancer starr_1519161309630413098833Mouse
15002134Gm24985predicted gene, 2498561311129813111426Mouse
1614921Vwdevon Willebrand factor D and EGF domains61315643913224964Mouse
1616456Gm725predicted gene 72561326369413264605Mouse
401840225LOC132411349STARR-positive B cell enhancer mm9_chr6:13230982-1323128361328098113281282Mouse
401714565LOC131371373STARR-seq mESC enhancer starr_1519261338464213386430Mouse
16114311700016P04RikRIKEN cDNA 1700016P04 gene61341333613415995Mouse
401713903LOC131371374STARR-seq mESC enhancer starr_1519361344121313444475Mouse
2299554Gm2796predicted gene 279661346141413461999Mouse
401700610LOC131371375STARR-seq mESC enhancer starr_1519461352685213528175Mouse
14998060Gm25737predicted gene, 2573761354950513549611Mouse
401704633LOC131371376STARR-seq mESC enhancer starr_1519661357621613577973Mouse
1317167Tmem168transmembrane protein 16861358068813608097Mouse
401836149LOC132411350STARR-positive B cell enhancer ABC_E1037061360938813609688Mouse
1615774Bmt2base methyltransferase of 25S rRNA 261362567413677965Mouse
401714344LOC131371377STARR-seq mESC enhancer starr_1519761363910113640623Mouse
401838457LOC132411351STARR-positive B cell enhancer ABC_E218661367783813678139Mouse
39130344Gm53312predicted gene, 5331261368953613689947Mouse
401841626LOC132411352STARR-positive B cell enhancer ABC_E481261369174713692048Mouse
401839045LOC132411353STARR-positive B cell enhancer mm9_chr6:13645143-1364544461369514213695443Mouse
401705158LOC131371378STARR-seq mESC enhancer starr_1519861369945113701012Mouse
401708368LOC131371379STARR-seq mESC enhancer starr_1519961374740013749739Mouse
401711558LOC131371380STARR-seq mESC enhancer starr_1520061376625613767699Mouse
401705914LOC131371381STARR-seq mESC enhancer starr_1520161377336513774592Mouse
733520Gpr85G protein-coupled receptor 8561383440513839951Mouse
401702834LOC131371382STARR-seq mESC enhancer starr_1520261384365513846838Mouse
401710715LOC131371383STARR-seq mESC enhancer starr_1520361385272113854726Mouse
401712000LOC131371384STARR-seq mESC enhancer starr_1520461385964413861113Mouse
2302589Smim30small integral membrane protein 3061386773413871517Mouse
401713575LOC131371385STARR-seq mESC enhancer starr_1520561387029513872505Mouse
16091641110019D14RikRIKEN cDNA 1110019D14 gene61387156813896420Mouse
10022341Gm38767predicted gene, 3876761401852414044655Mouse
5142295Gm19252predicted gene, 1925261408102614081654Mouse
401701881LOC131371386STARR-seq mESC enhancer starr_1520661409117614093026Mouse
15000832Gm23760predicted gene, 2376061411331514113430Mouse
401710561LOC131371387STARR-seq mESC enhancer starr_1520761412002414122427Mouse
401714703LOC131371388STARR-seq mESC enhancer starr_1520861422989514231396Mouse
401701498LOC131371389STARR-seq mESC enhancer starr_1520961423680614237783Mouse
401716702LOC131371390STARR-seq mESC enhancer starr_1521061428309314285736Mouse
2310563Gm8820predicted gene 882061438948014390043Mouse
401716170LOC131371391STARR-seq mESC enhancer starr_1521161445273314454524Mouse
14996048Gm23013predicted gene, 2301361445704414457147Mouse
401712363LOC131371392STARR-seq mESC enhancer starr_1521361448558414489050Mouse
401706524LOC131371393STARR-seq mESC enhancer starr_1521461449926814501025Mouse
10026163Gm38768predicted gene, 3876861460835014611996Mouse
401709793LOC131371394STARR-seq mESC enhancer starr_1521661464177514642743Mouse
401717030LOC131371395STARR-seq mESC enhancer starr_1521761465409914655180Mouse
401705334LOC131371396STARR-seq mESC enhancer starr_1521861467078114672482Mouse
1558275Ppp1r3aprotein phosphatase 1, regulatory subunit 3A61471382114755273Mouse
401714280LOC131371397STARR-seq mESC enhancer starr_1521961477529814777892Mouse
9664757Gm36300predicted gene, 3630061478379514822020Mouse
401716646LOC131371398STARR-seq mESC enhancer starr_1522061479419014795335Mouse
1615752Foxp2forkhead box P261490134815441976Mouse
2309865Gm2845predicted gene 284561494851414949137Mouse
401701908LOC131371399STARR-seq mESC enhancer starr_1522261496615014967475Mouse
401714089LOC131371400STARR-seq mESC enhancer starr_1522361523338515234712Mouse
401715034LOC131371401STARR-seq mESC enhancer starr_1522461546219515463862Mouse
401701131LOC131371402STARR-seq mESC enhancer starr_1522561551607915518418Mouse
9638287Gm36352predicted gene, 3635261563812515639756Mouse
1553252MdficMyoD family inhibitor domain containing61572066015802168Mouse
401835997LOC132411354STARR-positive B cell enhancer ABC_E641661574572615746027Mouse
401711640LOC131371403STARR-seq mESC enhancer starr_1523361578213215783259Mouse
401832310LOC132411355STARR-positive B cell enhancer mm9_chr6:15740163-1574046461579016215790463Mouse
401837899LOC132411356STARR-positive B cell enhancer ABC_E966161579338415793684Mouse
401710407LOC131371404STARR-seq mESC enhancer starr_1523461582273315824376Mouse
401836860LOC132411357STARR-positive B cell enhancer ABC_E170061584165315841954Mouse
2299367Gm3148predicted gene 314861623762416238237Mouse
401715654LOC131371405STARR-seq mESC enhancer starr_1523661624009116241109Mouse
401705468LOC131371406STARR-seq mESC enhancer starr_1523761626664816267935Mouse
401701617LOC131371407STARR-seq mESC enhancer starr_1523861629927716300454Mouse
401713954LOC131371408STARR-seq mESC enhancer starr_1523961635894916360585Mouse
401705361LOC131371409STARR-seq mESC enhancer starr_1524061636145616362885Mouse
401711651LOC131371410STARR-seq mESC enhancer starr_1524161638334416385200Mouse
401716190LOC131371411STARR-seq mESC enhancer starr_1524261639083416392167Mouse
9659008Gm36406predicted gene, 3640661645438016469902Mouse
401705226LOC131371412STARR-seq mESC enhancer starr_1524361651364816514392Mouse
401716843LOC131371413STARR-seq mESC enhancer starr_1524461652346616525016Mouse
9659237Gm36503predicted gene, 3650361652475416674379Mouse
401705211LOC131371414STARR-seq mESC enhancer starr_1524561660122216602326Mouse
401716313LOC131371415STARR-seq mESC enhancer starr_1524661662659916628675Mouse
401713408LOC131371416STARR-seq mESC enhancer starr_1524761673263016735013Mouse
9611856Gm36669predicted gene, 3666961677752316788511Mouse
735416Tfectranscription factor EC61683092616898463Mouse
1621142Gm5721predicted gene 572161692523016926918Mouse
401706609LOC131371417STARR-seq mESC enhancer starr_1524861693316916934219Mouse
5145787Gm15473predicted gene 1547361705880017065586Mouse
401841795LOC132411358STARR-positive B cell enhancer ABC_E277661706498017065281Mouse
1313347Testestin LIM domain protein61706514817105824Mouse
163680580LOC128925404CapStarr-seq enhancer MGSCv37_chr6:17015482-1701572761706548117065726Mouse
1614920Gm4876predicted gene 487661707626017171832Mouse
39129388Gm53251predicted gene, 5325161709758317145467Mouse
401702882LOC131371418STARR-seq mESC enhancer starr_1525261712432817125440Mouse
1607741D830026I12RikRIKEN cDNA D830026I12 gene61719775017205694Mouse
15018840Gm52892predicted gene, 5289261719891517199570Mouse
1551950Cav2caveolin 261728118417289129Mouse
1553438Cav1caveolin 1, caveolae protein61730638717341323Mouse
12793758Gm46953predicted gene, 4695361738190817383947Mouse
401713058LOC131371419STARR-seq mESC enhancer starr_1525361740977517411424Mouse
14997476Gm25021predicted gene, 2502161743630517436411Mouse
10894Metmet proto-oncogene61746335117573979Mouse
401717147LOC131371420STARR-seq mESC enhancer starr_1525561749083717492539Mouse
15021033Gm52893predicted gene, 5289361753640317541796Mouse
39130004Gm53318predicted gene, 5331861759483417610203Mouse
401712562LOC131371421STARR-seq mESC enhancer starr_1525661762087617622242Mouse
1558430Capza2capping actin protein of muscle Z-line subunit alpha 261763700917666971Mouse
401842193LOC132411359STARR-positive B cell enhancer ABC_E966261767544717675747Mouse
1550912St7suppression of tumorigenicity 761769357917943022Mouse
5147040Gm13898predicted gene 1389861771040017711205Mouse
5146878Gm13899predicted gene 1389961771168617712723Mouse
401841977LOC132411360STARR-positive B cell enhancer mm9_chr6:17682030-1768233161773202917732330Mouse
15021024Gm52895predicted gene, 5289561775655817762148Mouse
401708143LOC131371422STARR-seq mESC enhancer starr_1525961776034017761335Mouse
401839343LOC132411361STARR-positive B cell enhancer mm9_chr6:17726341-1772664261777634017776641Mouse
401714699LOC131371423STARR-seq mESC enhancer starr_1526061782337317824823Mouse
401711215LOC131371424STARR-seq mESC enhancer starr_1526161783978617842378Mouse
401715100LOC131371425STARR-seq mESC enhancer starr_1526361797634717977650Mouse
736432Wnt2wingless-type MMTV integration site family, member 261798893918032771Mouse
735327Asz1ankyrin repeat, SAM and basic leucine zipper domain containing 161805096318109060Mouse
2299051Gm15593predicted gene 1559361814471418145943Mouse
2299044Gm15596predicted gene 1559661815616718157239Mouse
39129201LOC111674480Cftr promoter region61816970118171127Mouse
10331Cftrcystic fibrosis transmembrane conductance regulator61817068618322769Mouse
401714105LOC131371426STARR-seq mESC enhancer starr_1526661822454218225913Mouse
5146989Gm15595predicted gene 1559561829426918295197Mouse
1617585Cttnbp2cortactin binding protein 261836647018515216Mouse
401708622LOC131371427STARR-seq mESC enhancer starr_1526761841805218419498Mouse
10026660Gm40356predicted gene, 4035661843544118448517Mouse
401701648LOC131371428STARR-seq mESC enhancer starr_1526861848377618486649Mouse
15002584Gm23648predicted gene, 2364861872729118727397Mouse
401713063LOC131371429STARR-seq mESC enhancer starr_1527161877109918773804Mouse
401716490LOC131371430STARR-seq mESC enhancer starr_1527261882218418823758Mouse
1614685Gm5874predicted gene 587461882451318825577Mouse
401837768LOC132411362STARR-positive B cell enhancer mm9_chr6:18798382-1879868361884838118848682Mouse
1318212Lsm8LSM8 homolog, U6 small nuclear RNA associated61884863418854051Mouse
1557426Ankrd7ankyrin repeat domain 761885583018879588Mouse
401701973LOC131371431STARR-seq mESC enhancer starr_1527361886058018862598Mouse
401703499LOC131371432STARR-seq mESC enhancer starr_1527461889953518900754Mouse
401717239LOC131371433STARR-seq mESC enhancer starr_1527561899667718998008Mouse
2309191Gm6655predicted gene 665561911943519121167Mouse
401710831LOC131371434STARR-seq mESC enhancer starr_1527661913467419136311Mouse
401704288LOC131371435STARR-seq mESC enhancer starr_1527761918829619189639Mouse
16107764930524B17RikRIKEN cDNA 4930524B17 gene61924789819278842Mouse
1618416Eif3s6-ps4eukaryotic translation initiation factor 3, subunit 6, pseudogene 461931802019319399Mouse
401715132LOC131371436STARR-seq mESC enhancer starr_1527861945578219457795Mouse
401712400LOC131371437STARR-seq mESC enhancer starr_1527961947073619471418Mouse
9640938Mir6370microRNA 637061955534119555460Mouse
15001281Gm22828predicted gene, 2282861962460819624714Mouse
401714972LOC131371438STARR-seq mESC enhancer starr_1528061976017819761373Mouse
5143077Gm18482predicted gene, 1848261977397419777550Mouse
401705381LOC131371439STARR-seq mESC enhancer starr_1528161985484619856519Mouse
401708689LOC131371440STARR-seq mESC enhancer starr_1528261992618619927890Mouse
401709198LOC131371441STARR-seq mESC enhancer starr_1528361994047319942732Mouse
401700520LOC131371442STARR-seq mESC enhancer starr_1528461995826419960509Mouse
401709759LOC131371443STARR-seq mESC enhancer starr_1528561996153919964328Mouse
401703282LOC131371444STARR-seq mESC enhancer starr_1528662009137920092818Mouse
401703697LOC131371445STARR-seq mESC enhancer starr_1528762021644720217412Mouse
401711923LOC131371446STARR-seq mESC enhancer starr_1528862023135420232546Mouse
401710174LOC131371447STARR-seq mESC enhancer starr_1528962023755020238586Mouse
15020908Gm52880predicted gene, 5288062042516220425572Mouse
401710136LOC131371448STARR-seq mESC enhancer starr_1529062042549420426779Mouse
9671315Gm29798predicted gene, 2979862049053820495808Mouse
401706004LOC131371449STARR-seq mESC enhancer starr_1529162051476220516369Mouse
401711976LOC131371450STARR-seq mESC enhancer starr_1529262061987720621153Mouse
401714957LOC131371451STARR-seq mESC enhancer starr_1529362062605620627741Mouse
401716072LOC131371452STARR-seq mESC enhancer starr_1529462068614920688246Mouse
401712127LOC131371453STARR-seq mESC enhancer starr_1529562079270120794318Mouse
401714314LOC131371454STARR-seq mESC enhancer starr_1529662081947420821868Mouse
10008886Gm38772predicted gene, 3877262095002620970377Mouse
5142449Gm19102predicted gene, 1910262097031420971220Mouse
14998905Gm23960predicted gene, 2396062101311121013241Mouse
401703089LOC131371455STARR-seq mESC enhancer starr_1529862101382221015093Mouse
401706836LOC131371456STARR-seq mESC enhancer starr_1529962102616421027505Mouse
15002952Gm26373predicted gene, 2637362112815521128257Mouse
68575Kcnd2potassium voltage-gated channel, Shal-related family, member 262121210121729804Mouse
401714697LOC131371457STARR-seq mESC enhancer starr_1530062132452021326007Mouse
401717310LOC131371458STARR-seq mESC enhancer starr_1530162135214121353874Mouse
401705307LOC131371459STARR-seq mESC enhancer starr_1530262139355921394936Mouse

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
14746985Manh59_mmandible shape 59 (mouse)6120847193Mouse
1301178Lith10_mlithogenic gene 10 (mouse)Not determined6121465015Mouse
10043884Bhr8_mbronchial hyperresponsiveness 8 (mouse)Not determined6121465015Mouse
10044000Mobq9_mmultigenetic obesity QTL 9 (mouse)Not determined6121465015Mouse
1357503Nhdlq5_mnon-HDL QTL 5 (mouse)Not determined6121465015Mouse
12904934Edlmmq4_mextensor digitorum longus muscle mass QTL 4 (mouse)6125514064Mouse
12904942Tammq3_mtibialis anterior muscle mass QTL 3 (mouse)6125514064Mouse
12904955Gmmq3_mgastrocnemius muscle mass QTL 3 (mouse)6125514064Mouse
1301131Chol2_mcholesterol 2 (mouse)Not determined6132144495Mouse
5491191Mobq2_mmultigenic obesity QTL 2 (mouse)Not determined6132144495Mouse
1302024Skull7_mskull morphology 7 (mouse)Not determined6132144495Mouse
15039372Nmrs22_mNAFLD-associated magnetic resonance shift 22 (mouse)6147633435476334Mouse
25440480Moaq2_mmodifier of alien QTL 2 (mouse)63050001117476961Mouse
26884414Bzwq12_mbi-zygomatic width QTL 12, 16 week (mouse)63400000139076998Mouse
14700782Syncq6_msynovial calcification QTL 6 (mouse)641770005219000Mouse
1300731Smdq3_msegregation of mitochondrial DNA QTL 3 (mouse)Not determined6424920638249325Mouse
1300556Cia6_mcollagen induced arthritis QTL 6 (mouse)Not determined6446488487403016Mouse
11353836Bmiq1_mbody mass index QTL 1 (mouse)6450382329751333Mouse
11353840Bmiq2_mbody mass index QTL 2 (mouse)6450382345291115Mouse
1357520Axtq2_manxiety QTL 2 (mouse)Not determined6450382348703611Mouse
1357481Aaj2_manxiety in A/J 2 (mouse)Not determined6450382348703611Mouse
11353841Bmiq3_mbody mass index QTL 3 (mouse)6450382348703611Mouse
4142271Egq8_mearly growth QTL 8 (mouse)Not determined450382396633110Mouse
4142232W6q4_mweight 6 weeks QTL 4 (mouse)Not determined450382396633110Mouse
4142126W3q3_mweight 3 weeks QTL 3 (mouse)Not determined450382396633110Mouse
4142361W10q11_mweight 10 weeks QTL 11 (mouse)Not determined450382396633110Mouse
26884441Sklq3_mskull length QTL 3, 5 week (mouse)6760000080576983Mouse
1302051Sluc7_msusceptibility to lung cancer 7 (mouse)Not determined6929707443297168Mouse
10043869Cia6a_mcollagen induced arthritis QTL 6a (mouse)Not determined61211797146118069Mouse
4141749Obrq2_mobesity resistance QTL 2 (mouse)Not determined1275122146751333Mouse
1301998Bts2_mbladder tumor susceptibility 2 (mouse)Not determined61275122146751333Mouse
27226726Tibmd7_mtibia midshaft diameter 7, 16 week (mouse)61769999953476985Mouse
1301850Fglu_mfasting glucose (mouse)Not determined61771159851711719Mouse
1301724Pcd4ts1_mp-glycoprotein positive CD4 T cell subset 1 (mouse)Not determined61771159851711719Mouse
4140989Spqq2_msperm quality QTL 2 (mouse)Not determined1771159851711719Mouse
1357442Dbts1_mdiabetes 1 (mouse)Not determined61823414773364675Mouse
12904940Edlmmq5_mextensor digitorum longus muscle mass QTL 5 (mouse)61961634653616346Mouse
12904943Tammq4_mtibialis anterior muscle mass QTL 4 (mouse)61961634653616346Mouse
12904952Gmmq4_mgastrocnemius muscle mass QTL 4 (mouse)61961634653616346Mouse
10412213Sxbq2_mSGC/Knj cross B6 QTL 2 (mouse)Not determined61991268571299759Mouse
10412107Desp4_mdespair 4 (mouse)Not determined62004983054049830Mouse


Additional Information

Database Acc Id Source(s)
MGD MGI:2653455

RGD Curation Notes
Note Type Note Reference