RA29_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: RA29_H (Rheumatoid arthritis QTL 29 (human)) Homo sapiens

Symbol: RA29_H
Name: Rheumatoid arthritis QTL 29 (human)
RGD ID: 1298512
Trait: Joint/bone inflammation
Measurement Type: rheumatoid arthritis
LOD Score: Not Available
P Value: 0.0017
Variance: Not Available
Inheritance Type: dominant
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371759,681,011 - 81,195,210RGD_MAPPER_PIPELINEGRCh37
Build 361757,192,606 - 78,774,742RGDNCBI36
Build 341755,092,381 - 85,092,381RGD
Cross Type: Not Available
Population Stats: affected sib pairs from the United States gathered by the North American Rheumatoid Arthritis Consortium



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Human Phenotype
Arthritis  (QTM)
References

References - curated
# Reference Title Reference Citation
1. A genomewide screen in multiplex rheumatoid arthritis families suggests genetic overlap with other autoimmune diseases. Jawaheer D, etal., Am J Hum Genet 2001 Apr;68(4):927-36. Epub 2001 Mar 9.

Region

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
Position Markers

Peak: (D17S1301)
Human AssemblyChrPosition (strand)Source
GRCh371772,680,935 - 72,681,088UniSTS
Build 361770,192,530 - 70,192,683RGD
Celera1769,273,914 - 69,274,067RGD
Cytogenetic Map17q25.1UniSTS
HuRef1768,089,828 - 68,089,981UniSTS
Marshfield Genetic Map17100.02UniSTS
Marshfield Genetic Map17100.02RGD
deCODE Assembly Map17113.59UniSTS


Additional Information

Database Acc Id Source(s)
NCBI Gene RA29_H
OMIM 180300

RGD Curation Notes
Note Type Note Reference
qtl_population affected sib pairs from the United States gathered by the North American Rheumatoid Arthritis Consortium 738125
qtl_population_details genomewide scans were conducted from 257 families, containing 301 sibling pairs, from the United States; mean age of disease onset was 39.0 years; 90% of families were white 738125
qtl_statistics_details nonparametric linkage analysis performed using SIBPAL from SAGE version 3.1 738125