UniSTS:224356 Marker Search Result - Rat Genome Database

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Marker: UniSTS:224356

Symbol: UniSTS:224356
Previously known as:
RGD ID: 5507073
Expected Size: 114 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2X1,227,192 - 1,227,306 (+)MAPPERmRatBN7.2
Rnor_6.0X1,378,995 - 1,379,108NCBIRnor6.0
Rnor_5.0X2,194,186 - 2,194,299UniSTSRnor5.0
RGSC_v3.4X12,556,705 - 12,556,818UniSTSRGSC3.4
CeleraX1,795,028 - 1,795,141UniSTS
Cytogenetic MapXq11.1UniSTS
Cytogenetic MapXq12UniSTS
Is Marker For: Genes:   Araf   Syn1  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer AGGTTGGAGGAAGATGCAGA
Reverse Primer TGACTGACTTGGCCTCCTTT
 

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
3797Syn1synapsin IX11722081227400Rat

Nucleotide Sequences
RefSeq Transcripts NM_001110782.2 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_019133.2 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
731181Uae27Urinary albumin excretion QTL 272.70.0059urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)X143491017Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene 24949 UniSTS
  64363 UniSTS
UniSTS 224356 UniSTS