| 2299160 | Iddm35 | Insulin dependent diabetes mellitus QTL 35 | 2.79 | | Glucose level | insulin-dependent | 18 | 4320091 | 76880933 | Rat |
| 2293708 | Bss46 | Bone structure and strength QTL 46 | 8.8 | .0001 | Bone structure | | 18 | 12245097 | 66720186 | Rat |
| 1578661 | Bss20 | Bone structure and strength QTL 20 | 3.7 | | Bone structure | femoral neck total area | 18 | 12245097 | 86863412 | Rat |
| 1578667 | Bss21 | Bone structure and strength QTL 21 | 3.5 | | Bone structure | femoral neck cortical area | 18 | 12245097 | 86863412 | Rat |
| 1331753 | Bp231 | Blood pressure QTL 231 | 3.643 | | Blood pressure | systolic | 18 | 12406975 | 54605912 | Rat |
| 1358358 | Sradr6 | Stress Responsive Adrenal Weight QTL 6 | 2.49 | | Hypothalamic-pituitary-adrenal axis | adrenal gland weight | 18 | 12406975 | 62106220 | Rat |
| 70178 | Eaez | Experimental allergic encephalomyelitis QTL z | 2.3 | | Brain/spinal cord inflammation | severity of disease | 18 | 13239641 | 58239641 | Rat |
| 2313082 | Bss85 | Bone structure and strength QTL 85 | .8 | .0001 | Bone structure | | 18 | 15584909 | 60584909 | Rat |
| 1331754 | Bp230 | Blood pressure QTL 230 | 4.61609 | | Blood pressure | mean arterial | 18 | 15852436 | 72901291 | Rat |
| 6903356 | Bp354 | Blood pressure QTL 354 | 4.6 | | Blood pressure | salt-depleted | 18 | 15852579 | 62228896 | Rat |
| 1358193 | Emca2 | Estrogen-induced mammary cancer QTL 2 | 1.6 | | Mammary tumor susceptibility | estradiol-induced | 18 | 18562790 | 66652461 | Rat |
| 1600373 | Mamtr6 | Mammary tumor resistance QTL 6 | | | Mammary tumor resistance | | 18 | 19892650 | 86863412 | Rat |
| 1331741 | Bp232 | Blood pressure QTL 232 | 3.59112 | | Blood pressure | diastolic | 18 | 22353754 | 86857890 | Rat |
| 1641923 | Colcr8 | Colorectal carcinoma resistance QTL 8 | 3.1 | .0014 | Colorectal carcinoma resistance | | 18 | 22807203 | 54605912 | Rat |
| 1331733 | Bp233 | Blood pressure QTL 233 | 3.97196 | | Blood pressure | mean arterial | 18 | 25620884 | 72901291 | Rat |
| 61375 | Bp41 | Blood pressure QTL 41 | 2.4 | | Blood pressure | | 18 | 29344142 | 80277631 | Rat |
| 2293704 | Bss35 | Bone structure and strength QTL 35 | 4.59 | .0002 | Bone structure | | 18 | 31347802 | 76347802 | Rat |
| 2300157 | Bmd66 | Bone mineral density QTL 66 | 13.1 | .0001 | Bone mineral density | | 18 | 31347802 | 76347802 | Rat |
| 2300177 | Bmd65 | Bone mineral density QTL 65 | 19.7 | .0001 | Bone mineral density | | 18 | 31347802 | 76347802 | Rat |
| 738005 | Anxrr11 | Anxiety related response QTL 11 | 3.4 | | Anxiety response | open field inner locomotion | 18 | 32356601 | 77356601 | Rat |
| 61383 | Bp47 | Blood pressure QTL 47 | 17.3 | | Blood pressure | | 18 | 32371496 | 62660224 | Rat |
| 1331774 | Bp226 | Blood pressure QTL 226 | 4.41065 | | Blood pressure | mean arterial | 18 | 32458819 | 62229060 | Rat |
| 1331776 | Bp225 | Blood pressure QTL 225 | 2.829 | | Blood pressure | diastolic | 18 | 32458819 | 62229060 | Rat |
| 1331742 | Bp228 | Blood pressure QTL 228 | 3.88752 | | Blood pressure | mean arterial | 18 | 32458819 | 62229060 | Rat |
| 1331798 | Bp224 | Blood pressure QTL 224 | 3.53873 | | Blood pressure | mean arterial | 18 | 32458819 | 62229060 | Rat |
| 1331727 | Bp237 | Blood pressure QTL 237 | 3.053 | | Blood pressure | time series calculation | 18 | 32458819 | 64900201 | Rat |
| 61429 | Cia17 | Collagen induced arthritis QTL 17 | 4.6 | | Joint/bone inflammation | type II collagen induced | 18 | 32458819 | 73666623 | Rat |
| 2303120 | Mamtr8 | Mammary tumor resistance QTL 8 | | .001 | Mammary tumor resistance | | 18 | 32458819 | 86863412 | Rat |
| 6903347 | Bp350 | Blood pressure QTL 350 | 4.4 | | Blood pressure | salt-loaded | 18 | 32458940 | 62228896 | Rat |
| 631274 | Spl3 | Serum phospholipid level QTL 3 | 5.3 | | Protein level | | 18 | 32459145 | 80370367 | Rat |
| 631518 | Bw11 | Body weight QTL 11 | 2.8 | | Body weight | | 18 | 37135503 | 82135503 | Rat |
| 61367 | Iddm4 | Insulin dependent diabetes mellitus QTL 4 | 2.33 | .0074 | Glucose level | insulin-dependent | 18 | 41165704 | 86165704 | Rat |
| 1598826 | Anxrr20 | Anxiety related response QTL 20 | 3.04 | | Anxiety response | open field test- rearing | 18 | 44524337 | 87265094 | Rat |
| 6893683 | Bw110 | Body weight QTL 110 | 2.7 | .002 | Body weight | salt-loaded | 18 | 46513375 | 87265094 | Rat |
| 1331780 | Bp238 | Blood pressure QTL 238 | 3.269 | | Blood pressure | mean arterial | 18 | 48759354 | 62229060 | Rat |
| 1331736 | Bp227 | Blood pressure QTL 227 | 2.791 | | Blood pressure | diastolic | 18 | 48759354 | 62229060 | Rat |
| 1331806 | Bp229 | Blood pressure QTL 229 | 4.36484 | | Blood pressure | mean arterial | 18 | 48759354 | 72901291 | Rat |
| 6903345 | Bp349 | Blood pressure QTL 349 | 3.9 | | Blood pressure | salt-loaded | 18 | 48759666 | 62228896 | Rat |
| 6903349 | Bp351 | Blood pressure QTL 351 | 3.5 | | Blood pressure | salt-loaded | 18 | 48759666 | 62228896 | Rat |
| 6903351 | Bp352 | Blood pressure QTL 352 | 3.3 | | Blood pressure | salt-loaded | 18 | 48759666 | 62228896 | Rat |
| 61360 | Eaey | Experimental allergic encephalomyelitis QTL y | 3 | | Brain/spinal cord inflammation | duration of disease | 18 | 49034213 | 87265094 | Rat |