| 631210 | Bw3 | Body weight QTL3 | 5.9 | | Body fat amount | mesenteric | 8 | 73102005 | 117434131 | Rat |
| 631217 | Activ1 | Activity QTL 1 | 15.9 | | Activity level | novel environment | 8 | 106733287 | 113364148 | Rat |
| 61437 | Cia6 | Collagen induced arthritis QTL 6 | | | Joint/bone inflammation | type II collagen induced | 8 | 86627869 | 127907359 | Rat |
| 1358912 | Bw51 | Body weight QTL 51 | 2.95 | | Body weight | | 8 | 54364071 | 112242906 | Rat |
| 70197 | BpQTLcluster8 | Blood pressure QTL cluster 8 | 3.4 | | Blood pressure | systolic | 8 | 79313887 | 124313887 | Rat |
| 631653 | Bp125 | Blood pressure QTL 125 | 3.3 | | Blood pressure | systolic | 8 | 70474667 | 115474667 | Rat |
| 631650 | Stl6 | Serum triglyceride level QTL 6 | 4 | .0019 | Lipid level | triglyceride | 8 | 64616911 | 116844692 | Rat |
| 724539 | Cm19 | Cardiac mass QTL 19 | 2.6 | | Cardiac mass | | 8 | 98986085 | 126316942 | Rat |
| 738011 | Anxrr9 | Anxiety related response QTL 9 | 6.1 | | Anxiety response | open field inner locomotion | 8 | 98332663 | 129041809 | Rat |
| 738014 | Anxrr15 | Anxiety related response QTL 15 | 3.6 | .005 | Anxiety response | plus maze-center | 8 | 100915338 | 129041809 | Rat |
| 1298079 | Activ2 | Activity QTL 2 | 9.5 | .000001 | Activity level | novel environment | 8 | 44484215 | 129041809 | Rat |
| 1300171 | Bp184 | Blood pressure QTL 184 | 3.66 | | Blood pressure | salt-loaded time series calculation | 8 | 74281610 | 123415406 | Rat |
| 1358893 | Bp263 | Blood pressure QTL 263 | 5.01 | | Blood pressure | post sympathetic nervous system block | 8 | 98451122 | 127956046 | Rat |
| 1358903 | Bp252 | Blood pressure QTL 252 | 7 | .0001 | Blood pressure | post sympathetic nervous system block | 8 | 98451122 | 127956046 | Rat |
| 1549909 | Stresp11 | Stress response QTL 11 | 6.83 | .0019 | Stress response | defensive burying - coping | 8 | 78008525 | 123008525 | Rat |
| 1554321 | Bmd3 | Bone mineral density QTL 3 | 7.9 | .0001 | Bone mineral density | distal femur volumetric BMD by pQCT | 8 | 43561064 | 129041809 | Rat |
| 1581557 | Eae16 | Experimental allergic encephalomyelitis QTL 16 | 3.8 | | Brain/spinal cord inflammation | demyelination | 8 | 8294860 | 115338082 | Rat |
| 2300182 | Bmd56 | Bone mineral density QTL 56 | 5.4 | | Bone mineral density | | 8 | 100915338 | 129041809 | Rat |
| 2300181 | Bmd55 | Bone mineral density QTL 55 | 5.7 | .0001 | Bone mineral density | | 8 | 81048802 | 126048802 | Rat |
| 2303171 | Bp331 | Blood pressure QTL 331 | 5.57 | .005 | Blood pressure | systolic | 8 | 64762472 | 124310219 | Rat |
| 2313400 | Anxrr25 | Anxiety related response QTL 25 | | | Anxiety response | domestication | 8 | 93585899 | 118725315 | Rat |
| 2316950 | Scl66 | Serum cholesterol level QTL 66 | 4.1 | | Lipid level | serum cholesterol | 8 | 32203499 | 110106272 | Rat |
| 6903300 | Scl33 | Serum cholesterol QTL 33 | 2 | .0125 | Lipid level | cholesterol level | 8 | 89742772 | 129041809 | Rat |