AW528074 Marker Search Result - Rat Genome Database

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Marker: AW528074

Symbol: AW528074
Previously known as:
RGD ID: 5085531
Expected Size: 128 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.215101,036,347 - 101,036,475 (+)MAPPERmRatBN7.2
Rnor_6.015110,373,584 - 110,373,711NCBIRnor6.0
Rnor_5.015113,753,822 - 113,753,949UniSTSRnor5.0
RGSC_v3.415109,045,642 - 109,045,769UniSTSRGSC3.4
Celera1599,778,214 - 99,778,341UniSTS
RH 3.4 Map15692.39UniSTS
Cytogenetic Map15q25UniSTS
Is Marker For: Genes:   Itgbl1  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer TCAGGTTGCAGCATTTTGTC
Reverse Primer GCAACATGGCCACTAAGCAT
 

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1560635Itgbl1integrin subunit beta like 115100780184101041734Rat

Nucleotide Sequences
GenBank Nucleotide CH473951 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000245 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
70155Gcs1Gastric cancer susceptibility QTL13.8stomach morphology trait (VT:0000470)stomach tumor susceptibility score (CMO:0002043)1576306099101769107Rat
631655Bp126Blood pressure QTL 1264arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1558156477101769107Rat
731177Uae26Urinary albumin excretion QTL 262.40.025urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)1567588667101769107Rat
2317055Aia10Adjuvant induced arthritis QTL 103.41joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)1575788062101769107Rat
1549844Bss7Bone structure and strength QTL 76.4femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)1575788062101769107Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene 498564 UniSTS
UniSTS 260770 UniSTS