AI010402 Marker Search Result - Rat Genome Database

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Marker: AI010402

Symbol: AI010402
Previously known as:
RGD ID: 5085419
Expected Size: 257 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.27133,834,759 - 133,835,016 (+)MAPPERmRatBN7.2
Rnor_6.07144,307,617 - 144,307,873NCBIRnor6.0
Rnor_6.07145,435,639 - 145,435,895NCBIRnor6.0
Rnor_5.07143,218,556 - 143,218,812UniSTSRnor5.0
Rnor_5.07142,099,835 - 142,100,091UniSTSRnor5.0
RGSC_v3.47141,456,304 - 141,456,560UniSTSRGSC3.4
Celera7130,262,005 - 130,262,261UniSTS
RH 3.4 Map71062.9UniSTS
Cytogenetic Map7q36UniSTS
Is Marker For: Genes:   Calcoco1   LOC100912282  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer GGGAGAGAGGAAGTTCTTATTGC
Reverse Primer AAGACCTACCCTGGTTCTTTCTG
 

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
619812Calcoco1calcium binding and coiled coil domain 17133834705133849515Rat



QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300179Kidm5Kidney mass QTL 53.51kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)743747012135012528Rat
70173Niddm19Non-insulin dependent diabetes mellitus QTL 194.330.00005blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)764002457135012528Rat
1358891Bp265Blood pressure QTL 2652.21arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)783591953134666232Rat
1358914Bp266Blood pressure QTL 266arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)783591953134666232Rat
1549899Stresp8Stress response QTL 84.370.0008stress-related behavior trait (VT:0010451)defensive burying duration (CMO:0001961)790482196135012528Rat
2299163Iddm34Insulin dependent diabetes mellitus QTL 342.71blood glucose amount (VT:0000188)age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)791281130135012528Rat
731176Glom5Glomerulus QTL 52.50.0035kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)796670164135012528Rat
731174Uae23Urinary albumin excretion QTL 232.40.0042urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)7104603555135012528Rat
2306821Bp335Blood pressure QTL 3350.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)7106571501135012528Rat
631663Bw6Body weight QTL 63.4body mass (VT:0001259)body weight (CMO:0000012)7111075573134976056Rat
1300112Bp183Blood pressure QTL 1833.51arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)7111182207135012528Rat
1354582Stl11Serum triglyceride level QTL 113.42blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)7119513385135012528Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene 100912282 UniSTS
  246047 UniSTS
UniSTS 260702 UniSTS