RH141368 Marker Search Result - Rat Genome Database

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Marker: RH141368

Symbol: RH141368
Previously known as: AA964102; 
RGD ID: 5080074
Expected Size: 185 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2102,202,683 - 2,202,870 (+)MAPPERmRatBN7.2
mRatBN7.210529,094 - 529,279 (+)MAPPERmRatBN7.2
Rnor_6.010546,820 - 547,004NCBIRnor6.0
Rnor_6.0101,738,082 - 1,738,266NCBIRnor6.0
Rnor_5.01011,229,516 - 11,229,700UniSTSRnor5.0
Rnor_5.010626,929 - 627,113UniSTSRnor5.0
RGSC_v3.4101,448,851 - 1,449,037UniSTSRGSC3.4
RGSC_v3.410449,522 - 449,706UniSTSRGSC3.4
Celera1011,128,315 - 11,128,499UniSTS
Cytogenetic Map10q11UniSTS
Is Marker For: Genes:   Aurka-ps1   Aurka-ps2  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer AAATATAAAGCGGGTTCCTGCC
Reverse Primer CTGCTCAGTCACCAAGACTCGT
 

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
3112Abcc1ATP binding cassette subfamily C member 110528961655179Rat
1583746Aurka-ps1aurora kinase A, pseudogene 110529156530420Rat
1587094Rps3a-ps8ribosomal protein S3a, pseudogene 810624394625249Rat
1305823Cep20centrosomal protein 2010714051736826Rat
3136Myh11myosin heavy chain 1110743364838459Rat
620038Nde1nudE neurodevelopment protein 110839788883946Rat
2325341Mir484microRNA 48410887684887760Rat
619770Marf1meiosis regulator and mRNA stability factor 110888053932760Rat
1304845Ercc4l1excision repair cross-complementing rodent repair deficiency, complementation group 4-like 110954927983651Rat
1560833Mrtfbmyocardin related transcription factor B1011163151278106Rat
11510655Trnat-cgu2transfer RNA threonine (anticodon CGU) 21013070941307165Rat
7574419LOC102547286uncharacterized LOC1025472861013161081354300Rat
9685090Mir193bmicroRNA 193b1013177421317824Rat
41398555LOC120095007uncharacterized LOC1200950071013467891362336Rat
1565449Parnpoly(A)-specific ribonuclease1014106361548573Rat
1583666Dynll1ldynein light chain LC8-type 1 like1014927881493464Rat
1304791Bfarbifunctional apoptosis regulator1015520191585040Rat
61935Pla2g10phospholipase A2, group X1015977611610822Rat
41377001A930007A09RiklRIKEN cDNA A930007A09 gene like1016399211641775Rat
1585299Abcc1-ps1ATP binding cassette subfamily C member 1, pseudogene 11016417101750234Rat
1588846Marf1l1meiosis regulator and mRNA stability factor 1 like 11017644951768325Rat
1305733Bmerb1bMERB domain containing 11017798341946586Rat
40973505Ncoa4-ps1nuclear receptor coactivator 4, pseudogene 11018379361881059Rat
2324483Mpv17lMPV17 mitochondrial inner membrane protein like1019884512025300Rat
1562597Pdxdc1pyridoxal-dependent decarboxylase domain containing 11020250562113712Rat
1305160Ntan1N-terminal asparagine amidase1021110902126119Rat
7563847LOC102552514uncharacterized LOC1025525141021261852128818Rat
1305001Rrn3RRN3 homolog, RNA polymerase I transcription factor1021299492165381Rat
2324735Haus4-ps1HAUS augmin-like complex, subunit 4, pseudogene 11021689512170803Rat
41032296Srsf3-ps11serine and arginine rich splicing factor 3, pseudogene 111021721722176018Rat
41272198LOC120095382U7 small nuclear RNA1021781282178192Rat
40969829LOC120095234multidrug resistance-associated protein 1-like1022025502222456Rat
1588531Aurka-ps2aurora kinase A, pseudogene 21022027452204008Rat



QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
634329Pia15Pristane induced arthritis QTL 153.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)10124158324Rat
2293680Bss40Bone structure and strength QTL 405.660.0001femur strength trait (VT:0010010)femur total energy absorbed before break (CMO:0001677)10135225947Rat
634327Hc4Hypercalciuria QTL 42.4urine calcium amount (VT:0002985)urine calcium excretion rate (CMO:0000763)10138328221Rat
7411611Foco17Food consumption QTL 1718.70.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)10142315980Rat
70223Bp57Blood pressure QTL 575arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)10180676123Rat
10401803Kidm50Kidney mass QTL 50kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)1041834445418344Rat
631554Bp133Blood pressure QTL 1330.005arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1074336463851208Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene 363527 UniSTS
  497848 UniSTS
UniSTS 223364 UniSTS