RH139439 Marker Search Result - Rat Genome Database

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Keyword

General

Marker: RH139439

Symbol:

RH139439

Also known as:

AW527503;

Expected Size:

245 (bp)

Position

Map	Chr	Position	Source
Rat Cytogenetic Map	13	q22	UniSTS
RGSC Genome Assembly v5.0	13	85,371,929 - 85,372,173	UniSTS
RGSC Genome Assembly v3.4	13	78,266,148 - 78,266,392	UniSTS
Rat Celera Assembly	13	74,689,149 - 74,689,393	UniSTS
RH 3.4	13	456.7	UniSTS

Is Marker For:

Genes: Vamp4

Model

Launch Genome Browser (GBrowse) for Chr13:78266148..78266392

Annotation

References - curated

Strains and Sequence

Sequence

Region

Genes in Region (RGSC Genome Assembly v3.4)

Nucleotide Sequences

QTLs in Region (RGSC Genome Assembly v3.4)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
7207885	Glom27	Glomerulus QTL 27	3.9		Renal pathology	glomerulus inflammation	13	10556042	106075835	Rat
1581554	Pur11	Proteinuria QTL 11			Renal function	urine protein level	13	25430276	80482326	Rat
1581573	Uae36	Urinary albumin excretion QTL 36			Renal function	urine albumin level	13	25430276	80482326	Rat
1581570	Eae17	Experimental allergic encephalomyelitis QTL 17	4.1		Brain/spinal cord inflammation	demyelination	13	28645448	106366082	Rat
1354621	Rf47	Renal function QTL 47	3.7		Kidney renin concentration		13	32030139	105788017	Rat
2303563	Bw89	Body weight QTL 89	6		Body weight		13	34327911	79327911	Rat
61340	Bp25	Blood pressure QTL 25	4.2	.004	Blood pressure	salt-loaded systolic	13	35472372	80472372	Rat
1354655	Bp241	Blood pressure QTL 241	3.9		Blood pressure	systolic	13	37458331	105788017	Rat
724553	Glom3	Glomerulus QTL 3	2.9	.0004	Renal histology	number of surface glomeruli (SG)	13	38179982	83179982	Rat
1331750	Bp220	Blood pressure QTL 220	2.98		Blood pressure	diastolic	13	38489801	83489801	Rat
4889861	Pur29	Proteinuria QTL 29	13.8	.005	Renal function	urine protein level	13	38489801	84280390	Rat
61349	Bp31	Blood pressure QTL 31	5.75		Blood pressure		13	39572400	84572400	Rat
70220	Bp55	Blood pressure QTL 55	5.75		Blood pressure		13	39572400	84572400	Rat
1549897	Stresp12	Stress response QTL 12	3.35		Stress response	defensive burying - approach	13	40675437	85675437	Rat
724564	Uae11	Urinary albumin excretion QTL 11	5.7		Renal function	urine albumin level	13	46269934	80482429	Rat
1298066	Bp159	Blood pressure QTL 159		.004	Blood pressure	salt-loaded systolic	13	47690518	92690518	Rat
71119	Thym2	Thymus enlargement QTL 2	3.8		Gland mass	thymus	13	47699094	88282502	Rat
70181	BpQTLcluster11	Blood pressure QTL cluster 11	3.4		Blood pressure		13	52688796	97688796	Rat
1641901	Alcrsp6	Alcohol response QTL 6			Alcohol response	loss of righting reflex	13	55689252	100689252	Rat
738026	Lnnr5	Liver neoplastic nodule remodeling QTL 5	3.29		Liver neoplastic nodule remodeling frequency		13	62072299	94306205	Rat
1576318	Schws5	Schwannoma susceptibility QTL 5		.0351	Neural tumor susceptibility	tumor incidence, length of survival time	13	65464406	110464406	Rat
2293687	Bss26	Bone structure and strength QTL 26	4.6	.0001	Bone structure		13	68910877	111154910	Rat
2293702	Bss34	Bone structure and strength QTL 34	4.61	.0001	Bone structure		13	68910877	111154910	Rat
1331783	Bp221	Blood pressure QTL 221	3.72886		Blood pressure	time series calculation	13	72141292	90551272	Rat
1300166	Kidm6	Kidney mass QTL 6	3.93		Kidney mass	salt-loaded	13	72141292	90551272	Rat
2293341	Glom15	Glomerulus QTL 15	7.4		Renal pathology	glomerulus inflammation	13	78189125	106076220	Rat
738027	Lnnr6	Liver neoplastic nodule remodeling QTL 6	3.3		Liver neoplastic nodule remodeling frequency		13	78189125	111154910	Rat

Additional Information

External Database Links

More on RH139439
	Genome Browser
	Ensembl
	NCBI

RGD Object Information
RGD ID:	5076892
Created:	2011-03-04
Species:	Rattus norvegicus
Last Modified:	2013-05-16
Status:	ACTIVE