RH138845 Marker Search Result - Rat Genome Database

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Marker: RH138845

Symbol: RH138845
Previously known as: AW522188; 
RGD ID: 5075870
Expected Size: 179 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2X140,255,659 - 140,255,838 (+)MAPPERmRatBN7.2
Rnor_6.073,631,340 - 3,631,518NCBIRnor6.0
Rnor_6.0X144,999,605 - 144,999,783NCBIRnor6.0
Rnor_5.073,615,402 - 3,615,580UniSTSRnor5.0
Rnor_5.0X145,022,345 - 145,022,523UniSTSRnor5.0
RGSC_v3.4X147,478,427 - 147,478,605UniSTSRGSC3.4
CeleraX136,288,494 - 136,288,672UniSTS


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer GATTCTGGGTTTGTGGATGACT
Reverse Primer AAACGCACCATCTTGGTCTT
 

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
7730159Spanxn4lSPANX family, member N4 likeX140185366140255965Rat

Nucleotide Sequences
GenBank Nucleotide JH615743.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
738025Stresp3Stress response QTL 34.610.0066stress-related behavior trait (VT:0010451)defensive burying - approachX100567703150256146Rat
634346Insul4Insulin level QTL 40blood insulin amount (VT:0001560)serum insulin level (CMO:0000358)X126975089152453651Rat
10059603Bw174Body weight QTL 1743.40.025body mass (VT:0001259)body weight (CMO:0000012)X113937816152453651Rat
1598809Memor15Memory QTL 154.4exploratory behavior trait (VT:0010471)difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)X103312877148312877Rat
1598837Memor13Memory QTL 133.2exploratory behavior trait (VT:0010471)difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)X41052407146860749Rat
1598856Memor1Memory QTL 11.9exploratory behavior trait (VT:0010471)total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)X103312877148312877Rat


Additional Information

Database Acc Id Source(s)
UniSTS 220932 UniSTS