AI556806 Marker Search Result - Rat Genome Database

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Marker: AI556806

Symbol: AI556806
Previously known as:
RGD ID: 5059736
Expected Size: 189 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2X134,614,703 - 134,614,892 (+)MAPPERmRatBN7.2
Rnor_6.0X159,172,302 - 159,172,490NCBIRnor6.0
Rnor_5.0X153,802,934 - 153,803,122UniSTSRnor5.0
RGSC_v3.4X141,329,057 - 141,329,245UniSTSRGSC3.4
CeleraX142,663,691 - 142,663,879UniSTS
RH 3.4 MapX952.91UniSTS
Cytogenetic MapXq36UniSTS
Is Marker For: Genes:   Fhl1  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer TGAAACATTCGATGGAAACAGC
Reverse Primer GGGTTTCCTCCTCCTCTGAAAT
 

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
2615Fhl1four and a half LIM domains 1X134555399134614930Rat



QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
738025Stresp3Stress response QTL 34.610.0066stress-related behavior trait (VT:0010451)defensive burying - approachX100567703150256146Rat
738029Stresp2Stress response QTL 23.40.0004stress-related behavior trait (VT:0010451)defensive burying - approachX112934952138400867Rat
634346Insul4Insulin level QTL 40blood insulin amount (VT:0001560)serum insulin level (CMO:0000358)X126975089152453651Rat
10059603Bw174Body weight QTL 1743.40.025body mass (VT:0001259)body weight (CMO:0000012)X113937816152453651Rat
1598809Memor15Memory QTL 154.4exploratory behavior trait (VT:0010471)difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)X103312877148312877Rat
1598837Memor13Memory QTL 133.2exploratory behavior trait (VT:0010471)difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)X41052407146860749Rat
1598856Memor1Memory QTL 11.9exploratory behavior trait (VT:0010471)total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)X103312877148312877Rat
1598872Memor14Memory QTL 144.5exploratory behavior trait (VT:0010471)difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)X93956491138956491Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene 25177 UniSTS
UniSTS 244738 UniSTS