UniSTS:234029 Marker Search Result

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Keyword

General

Marker: UniSTS:234029

Symbol:

UniSTS:234029

Also known as:

Expected Size:

267 (bp)

Position

Map	Chr	Position	Source
Rat Cytogenetic Map	4	q24	UniSTS
RGSC Genome Assembly v5.0	4	155,592,730 - 155,592,996	UniSTS
RGSC Genome Assembly v3.4	4	89,614,050 - 89,614,316	UniSTS
Rat Celera Assembly	4	84,478,864 - 84,479,130	UniSTS

Is Marker For:

Genes: Snca

Model

Launch Genome Browser (GBrowse) for Chr4:89614050..89614316

Annotation

References - curated

Strains and Sequence

Sequence

Region

Genes in Region (RGSC Genome Assembly v3.4)

Nucleotide Sequences

QTLs in Region (RGSC Genome Assembly v3.4)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
2303168	Bp330	Blood pressure QTL 330	4.25	.017	Blood pressure		4	456799	149181446	Rat
631261	Tcas3	Tongue tumor susceptibility QTL 3	6		Tongue tumor susceptibility		4	6179441	91330582	Rat
2316958	Gluco58	Glucose level QTL 58	10		Glucose level	postprandial	4	6690606	185398530	Rat
1358352	Srcrt3	Stress Responsive Cort QTL 3	2.29		Hypothalamic-pituitary-adrenal axis	corticosterone post-stress	4	8819982	149560340	Rat
1300139	Hrtrt6	Heart rate QTL 6	2.85		Heart rate	salt-loaded	4	36611842	117887968	Rat
1576305	Emca6	Estrogen-induced mammary cancer QTL 6	5.8		Mammary tumor susceptibility	estradiol-induced	4	41729583	159115617	Rat
1354612	Foco1	Food consumption QTL 1	8.87		Consumption level	food intake	4	41729771	151158666	Rat
1354660	Salc1	Saline consumption QTL 1	11.26		Consumption level	saline intake	4	41729771	151158666	Rat
2312567	Glom19	Glomerulus QTL 19	1.9	.006	Renal pathology		4	43686352	149560340	Rat
1298082	Stresp4	Stress response QTL 4			Hormone level	corticosterone	4	47889730	149560340	Rat
70200	Alc18	Alcohol consumption QTL 18	9.2		Consumption level	alcohol preference	4	54828166	152570244	Rat
1641833	Alc21	Alcohol consumption QTL 21	8.6	.0001	Consumption level	alcohol preference	4	54879077	127941994	Rat
631546	Bp86	Blood pressure QTL 86	3.2		Blood pressure	systolic	4	55369931	91330856	Rat
1358363	Sradr3	Stress Responsive Adrenal Weight QTL 3	6.19		Hypothalamic-pituitary-adrenal axis	adrenal gland weight	4	56690161	101690161	Rat
1558651	Swd3	Spike wave discharge measurement QTL 3	4.62	.000024	Spike wave discharge measurement	frequency	4	56704868	91916048	Rat
738009	Sach4	Saccharine consumption QTL 4	4.9	.000016	Consumption level	saccharin preference	4	58421110	158108528	Rat
738016	Alc16	Alcohol consumption QTL 16	3.6	.00015	Consumption level	alcohol preference	4	58421110	158108528	Rat
738031	Alc14	Alcohol consumption QTL 14	7.6	.00003	Consumption level	alcohol preference	4	58421110	158108528	Rat
634344	Hcar7	Hepatocarcinoma resistance QTL 7	7.8		Liver tumor resistance	3-methyl-4-dimethylaminoazobenzene induced	4	58550170	93498821	Rat
2300179	Bmd50	Bone mineral density QTL 50	5.9	.0001	Bone mineral density		4	60200806	105200806	Rat
1549843	Bw53	Body weight QTL 53		.0001	Body weight		4	60262965	104415981	Rat
1549839	Bw52	Body weight QTL 52		.0001	Body weight		4	60262965	116780394	Rat
61418	Pia5	Pristane induced arthritis QTL 5	4.5		Joint/bone inflammation	inflammation score	4	60974346	130228614	Rat
1578657	Bss12	Bone structure and strength QTL 12	8.9		Bone structure	femoral neck total area	4	61483655	106483655	Rat
1578658	Bss13	Bone structure and strength QTL 13	8		Bone structure	femoral neck polar moment of inertia (Ip)	4	61483655	106483655	Rat
70192	BpQTLcluster5	Blood pressure QTL cluster 5	2.6		Blood pressure		4	61646915	116611046	Rat
6478684	Anxrr30	Anxiety related response QTL 30		.00087	Anxiety response		4	62386644	107386644	Rat
6478743	Anxrr40	Anxiety related response QTL 40		.83076	Anxiety response	pen field inner locomotion	4	62386644	107386644	Rat
6478772	Anxrr49	Anxiety related response QTL 49		.15488	Anxiety response	open field inner locomotion	4	62386644	107386644	Rat
631651	Bp124	Blood pressure QTL 124	3		Blood pressure	systolic	4	62514126	107514126	Rat
1641919	Alc22	Alcohol consumption QTL 22		.0005	Consumption level	alcohol preference	4	62832008	127941994	Rat
631674	Iddm14	Insulin dependent diabetes mellitus QTL 14			Glucose level		4	63276741	160891592	Rat
2312569	Pur19	Proteinuria QTL 19	3.4	.001	Renal function	urine protein level	4	63787419	96623433	Rat
61330	Eau1	Experimental allergic uveoretinitis QTL 1		.0003	Uvea inflammation score		4	69183301	134858710	Rat
631646	Stl4	Serum triglyceride level QTL 4	6.5	.0001	Lipid level	triglyceride	4	72160227	134858710	Rat
61476	Aia3	Adjuvant induced arthritis QTL 3	3.9		Joint/bone inflammation	arthritis severity	4	73972453	133939659	Rat
61406	Scwia1	Streptococcal cell wall induced arthritis QTL 1	2.3		Joint/bone inflammation	streptococcal cell wall induced	4	73972453	154937227	Rat
724522	Bp146	Blood pressure QTL 146	2.2	.0021	Blood pressure	systolic	4	74123346	119123346	Rat
2302051	Pia28	Pristane induced arthritis QTL 28	5.3	.001	Joint/bone inflammation	pristane induced	4	74123346	119123346	Rat
70167	Bw22	Body weight QTL 22	3.1		Body weight		4	75732943	119369308	Rat
1357342	Bw40	Body weight QTL 40		.001	Body weight		4	75732943	119369308	Rat
631662	Hcar2	Hepatocarcinoma resistance QTL 2	3.1	.0003	Liver tumor resistance	nodule volume	4	78035196	135074488	Rat
631556	Bp135	Blood pressure QTL 135		.05	Blood pressure		4	78038013	119369308	Rat
2306899	Bp338	Blood pressure QTL 338		.071	Blood pressure	salt-loaded systolic	4	80205349	121829076	Rat
738015	Pia9	Pristane induced arthritis QTL 9	4.5	.048	Joint/bone inflammation	arthritis severity	4	81916057	126916057	Rat
2306794	Ean2	Experimental allergic neuritis QTL 2	6.4		Peripheral nerve inflammation	demyelination	4	82700691	96313512	Rat
1576316	Ept5	Estrogen-induced pituitary tumorigenesis QTL 5	3.8		Gland mass	pituitary	4	82700691	182307104	Rat
70177	Xhs1	X-ray hypersensitivity QTL 1	25.1		X-ray sensitivity		4	82861630	155893772	Rat
634334	Xhs3	X-ray hypersensitivity QTL 3	10		X-ray sensitivity		4	84355208	131969855	Rat
1582232	Gluco25	Glucose level QTL 25	3.6	.0023	Glucose level	uptake	4	84886545	151158853	Rat
1358202	Gluco11	Glucose level QTL 11	2.4	.02	Glucose level	uptake	4	85014031	171204531	Rat
2317587	Eae26	Experimental allergic encephalomyelitis QTL 26			Brain/spinal cord inflammation	severity of disease	4	88462327	104416171	Rat
1578662	Bss15	Bone structure and strength QTL 15	19.6		Bone structure	femoral neck width	4	89539438	134539438	Rat
1578670	Bss14	Bone structure and strength QTL 14	16.4		Bone structure	femoral neck trabecular area	4	89539438	134539438	Rat

Additional Information

External Database Links

More on UniSTS:234029
	Genome Browser
	Ensembl
	NCBI

RGD Object Information
RGD ID:	5056987
Created:	2011-03-04
Species:	Rattus norvegicus
Last Modified:	2013-05-16
Status:	ACTIVE