| 1358190 | Ept1 | Estrogen-induced pituitary tumorigenesis QTL 1 | 4.4 | | Gland mass | pituitary | 6 | 1 | 8184962 | Rat |
| 2292616 | Ept15 | Estrogen-induced pituitary tumorigenesis QTL 15 | 4.4 | | Gland mass | pituitary | 6 | 1 | 8184962 | Rat |
| 1598843 | Cm63 | Cardiac mass QTL 63 | 2.6 | | Cardiac mass | | 6 | 1 | 23802078 | Rat |
| 1578758 | Tcas9 | Tongue tumor susceptibility QTL 9 | 3.29 | | Tongue tumor susceptibility | tongue tumor number | 6 | 1 | 25291384 | Rat |
| 1331743 | Uae28 | Urinary albumin excretion QTL 28 | 4.5 | | Renal function | urine albumin level | 6 | 1 | 28765971 | Rat |
| 738023 | Alc17 | Alcohol consumption QTL 17 | 3.1 | .003 | Consumption level | alcohol preference | 6 | 1 | 35786687 | Rat |
| 1549905 | Stresp10 | Stress response QTL 10 | 6.83 | .0066 | Stress response | defensive burying - approach | 6 | 1 | 35786687 | Rat |
| 1354616 | Despr12 | Despair related QTL 12 | | .0012 | Activity level | climbing level | 6 | 1 | 35786687 | Rat |
| 2300176 | Bmd51 | Bone mineral density QTL 51 | 11.7 | .0001 | Bone mineral density | | 6 | 1 | 35786687 | Rat |
| 2300190 | Bmd52 | Bone mineral density QTL 52 | 11.2 | .0001 | Bone mineral density | | 6 | 1 | 35786687 | Rat |
| 2293709 | Bss23 | Bone structure and strength QTL 23 | 5.18 | .0001 | Bone structure | | 6 | 1 | 42401411 | Rat |
| 2293650 | Bss31 | Bone structure and strength QTL 31 | 5.05 | .0001 | Bone structure | | 6 | 1 | 42401411 | Rat |
| 2293656 | Bss28 | Bone structure and strength QTL 28 | 6.79 | .0001 | Bone structure | | 6 | 1 | 42401411 | Rat |
| 738024 | Sach5 | Saccharine consumption QTL 5 | 3.9 | .00039 | Consumption level | saccharin preference | 6 | 1 | 43326782 | Rat |
| 1359023 | Bp272 | Blood pressure QTL 272 | 2.5 | | Blood pressure | mean arterial pressure, stress related changes | 6 | 1301952 | 27253998 | Rat |
| 2292589 | Emca10 | Estrogen-induced mammary cancer QTL 10 | | .048 | Mammary tumor resistance | | 6 | 1301952 | 46301952 | Rat |
| 1354664 | Slep2 | Serum leptin concentration QTL 2 | 4.49 | | Hormone level | leptin | 6 | 1301952 | 74436995 | Rat |
| 1576309 | Emca7 | Estrogen-induced mammary cancer QTL 7 | 4 | | Mammary tumor susceptibility | estradiol-induced | 6 | 2802670 | 111967837 | Rat |
| 70196 | BpQTLcluster7 | Blood pressure QTL cluster 7 | 6.82 | | Blood pressure | intra-arterial | 6 | 3158498 | 75049527 | Rat |
| 1578665 | Bss16 | Bone structure and strength QTL 16 | 4.4 | | Bone structure | femoral neck trabecular area | 6 | 6265856 | 75462111 | Rat |
| 1578668 | Bmd14 | Bone mineral density QTL 14 | 3.8 | | Bone mineral density | femoral neck total vBMD | 6 | 6265856 | 75462111 | Rat |