RH142975 Marker Search Result - Rat Genome Database

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Marker: RH142975

Symbol: RH142975
Previously known as: AI029747; 
RGD ID: 5054005
Expected Size: 270 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21783,458,908 - 83,459,178 (+)MAPPERmRatBN7.2
Rnor_6.01787,836,412 - 87,836,681NCBIRnor6.0
Rnor_5.01789,525,521 - 89,525,790UniSTSRnor5.0
RGSC_v3.41794,927,794 - 94,928,063UniSTSRGSC3.4
Celera1782,719,691 - 82,719,960UniSTS
RH 3.4 Map17874.61UniSTS
Cytogenetic Map17q12.3UniSTS
Is Marker For: Genes:   Arhgap21  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer TGCAAAGGACACGCAGTTAC
Reverse Primer GCTTCATAACCAGCTTTGGC
 

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1311028Arhgap21Rho GTPase activating protein 21178334867383472202Rat

Nucleotide Sequences
GenBank Nucleotide CH473990 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000247 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1358295Aocep1Aortic cell protein QTL 16.10.00000071thoracic aorta cellular protein amount (VT:0010598)aortic cell percentage174099000585990005Rat
7411575Bw140Body weight QTL 14030.20.001body mass (VT:0001259)body weight gain (CMO:0000420)174856093586533673Rat
8694181Bw151Body weight QTL 1514.360.001body mass (VT:0001259)body weight gain (CMO:0000420)174856093586533673Rat
2317038Ginf3Gastrointestinal inflammation QTL 32.890.005liver integrity trait (VT:0010547)liver granuloma severity score (CMO:0002157)174992015486533673Rat
2303580Gluco49Glucose level QTL 492blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)175004027186533673Rat
4889894Eae33Experimental allergic encephalomyelitis QTL 335.20.0001nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis severity score (CMO:0001419)175090909986022412Rat
2317045Aia11Adjuvant induced arthritis QTL 114.06joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)176078142686533673Rat
7411577Bw141Body weight QTL 1410.001body mass (VT:0001259)body weight gain (CMO:0000420)176261951686533673Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene 307178 UniSTS
UniSTS 232222 UniSTS