RH94728 Marker Search Result - Rat Genome Database

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Marker: RH94728

Symbol: RH94728
Previously known as: Gata6; L22760; 
RGD ID: 5051909
Expected Size: 183 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2182,218,434 - 2,218,617 (+)MAPPERmRatBN7.2
Rnor_6.0182,445,990 - 2,446,172NCBIRnor6.0
Rnor_5.0182,465,618 - 2,465,800UniSTSRnor5.0
RGSC_v3.4182,534,300 - 2,534,482UniSTSRGSC3.4
Celera182,095,416 - 2,095,598UniSTS
RH 3.4 Map1810.8UniSTS
Cytogenetic Map18p13UniSTS
Is Marker For: Genes:   Gata6  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer TTTGTCCAGCAGTCCAGATG
Reverse Primer GACCCAGGCTGACAGGAATA
 

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
2666Gata6GATA binding protein 61821881212219532Rat

Nucleotide Sequences
RefSeq Transcripts NM_019185 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide L22760 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
8552968Pigfal19Plasma insulin-like growth factor 1 level QTL 1911.4blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)18125758124Rat
9590248Scort10Serum corticosterone level QTL 1019.710.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)18125758124Rat
2312598Bp340Blood pressure QTL 3400.05arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)18130558703Rat
2300180Bmd67Bone mineral density QTL 674.80.0001femur mineral mass (VT:0010011)bone mineral density (CMO:0001226)18134291613Rat
2293661Bss50Bone structure and strength QTL 504.640.0003lumbar vertebra size trait (VT:0010518)lumbar vertebra trabecular cross-sectional area (CMO:0001692)18134291613Rat
61388Bp2Blood pressure QTL 23.23arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)18135374722Rat
9589153Insul31Insulin level QTL 317.150.05blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)18142547119Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene 29300 UniSTS
UniSTS 119975 UniSTS