RH129530 Marker Search Result - Rat Genome Database

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Marker: RH129530

Symbol: RH129530
Previously known as: AA964619; 
RGD ID: 5042596
Expected Size: 184 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2181,018,213 - 1,018,397 (+)MAPPERmRatBN7.2
Rnor_6.0181,177,087 - 1,177,270NCBIRnor6.0
Rnor_5.0181,220,007 - 1,220,190UniSTSRnor5.0
RGSC_v3.4181,291,101 - 1,291,284UniSTSRGSC3.4
Celera18911,381 - 911,564UniSTS
RH 3.4 Map1831.0UniSTS
Cytogenetic Map18p13UniSTS
Is Marker For: Genes:   Thoc1  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer TGTTGTACAGTTAGCTGGTGCT
Reverse Primer AATTTGGGACAGGACTCTAACA
 

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1308657Thoc1THO complex subunit 1189838241019123Rat
1311825Usp14ubiquitin specific peptidase 141810181111057727Rat

Nucleotide Sequences
GenBank Nucleotide JH619127.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
8552968Pigfal19Plasma insulin-like growth factor 1 level QTL 1911.4blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)18125758124Rat
9590248Scort10Serum corticosterone level QTL 1019.710.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)18125758124Rat
2312598Bp340Blood pressure QTL 3400.05arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)18130558703Rat
2300180Bmd67Bone mineral density QTL 674.80.0001femur mineral mass (VT:0010011)bone mineral density (CMO:0001226)18134291613Rat
2293661Bss50Bone structure and strength QTL 504.640.0003lumbar vertebra size trait (VT:0010518)lumbar vertebra trabecular cross-sectional area (CMO:0001692)18134291613Rat
61388Bp2Blood pressure QTL 23.23arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)18135374722Rat
9589153Insul31Insulin level QTL 317.150.05blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)18142547119Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene 291797 UniSTS
UniSTS 212832 UniSTS