RH129135 Marker Search Result - Rat Genome Database

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Marker: RH129135

Symbol: RH129135
Previously known as: AA956581; 
RGD ID: 5041920
Expected Size: 213 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2563,889,074 - 63,889,287 (+)MAPPERmRatBN7.2
Rnor_6.0564,805,802 - 64,806,014NCBIRnor6.0
Rnor_5.0569,297,215 - 69,297,427UniSTSRnor5.0
RGSC_v3.4566,283,195 - 66,283,407UniSTSRGSC3.4
Celera563,718,698 - 63,718,910UniSTS
RH 3.4 Map5428.2UniSTS
Cytogenetic Map5q22UniSTS
Is Marker For: Genes:   Aldob  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer CTGCTGCTGTGCCTCTTCTCTA
Reverse Primer GAGTATGAGCACGTCACCCAGT
 

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
2090Aldobaldolase, fructose-bisphosphate B56388904563902086Rat

Nucleotide Sequences
RefSeq Transcripts NM_012496 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide BC081697 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ209505 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ209538 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ209583 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ209594 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ209615 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ209621 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ209639 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ209643 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ209782 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ209819 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ210002 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ210208 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ210450 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ210453 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ210678 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ210849 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ211083 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ211156 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ211159 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ211293 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218139 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218217 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218348 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218365 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218397 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218402 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218522 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218551 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218592 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218603 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218665 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218876 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218885 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218911 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218999 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219077 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219096 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219116 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219236 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219261 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219384 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219435 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219453 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219528 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219555 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219574 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219585 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219590 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219593 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219609 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219640 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219646 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219692 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219698 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ219703 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M10149 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  V01223 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X02291 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1331756Rf34Renal function QTL 344.16275kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)5190450412Rat
70212Niddm25Non-insulin dependent diabetes mellitus QTL 253.54blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)51131345958Rat
1331771Rf35Renal function QTL 354.36965kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)572947086724018Rat
1576314Eutr1Estrogen induced uterine response QTL 1uterus integrity trait (VT:0010575)pyometritis severity score (CMO:0002009)52138965166875058Rat
8662454Vetf3Vascular elastic tissue fragility QTL 327.4artery integrity trait (VT:0010639)number of ruptures of the internal elastic lamina of the abdominal aorta and iliac arteries (CMO:0002562)5228222669540447Rat
7394712Emca13Estrogen-induced mammary cancer QTL 13mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)5982326699753708Rat
634305Mamtr1Mammary tumor resistance QTL 10.0001mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)512789751113558310Rat
1358353Srcrtb2Stress Responsive Cort Basal QTL 23.480.003blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)51887394774251464Rat
8552954Pigfal14Plasma insulin-like growth factor 1 level QTL 149blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)52122674466226744Rat
1578767Stresp17Stress response QTL 174.30.01blood aldosterone amount (VT:0005346)plasma aldosterone level (CMO:0000551)52795544072955440Rat
1578776Stresp18Stress response QTL 182.9thymus mass (VT:0004954)thymus wet weight (CMO:0000855)52795544072955440Rat
6903292Stl28Serum triglyceride level QTL 282.60.0073blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)52851548973515489Rat
6903306Scl35Serum cholesterol QTL 352.60.0073blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)52851548973515489Rat
2290448Scl54Serum cholesterol level QTL 542.93blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)531663789131345958Rat
1598807Glom12Glomerulus QTL 122.7kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)53321566578215665Rat
1298067Scl15Serum cholesterol level QTL 154.80.001blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)53321566578215665Rat
1302786Kidm8Kidney mass QTL 828.15kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)53321566578215665Rat
1576317Eutr2Estrogen induced uterine response QTL 20.01uterus integrity trait (VT:0010575)pyometritis severity score (CMO:0002009)534730116104251008Rat
2316959Gluco59Glucose level QTL 594.7blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)534944474113558310Rat
1641922Alcrsp8Alcohol response QTL 8alcohol metabolism trait (VT:0015089)blood ethanol level (CMO:0000535)53518915368564008Rat
1641912Alcrsp18Alcohol response QTL 18response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)535189153141643988Rat
1549845Scl44Serum cholesterol level QTL 446blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)540128307148607290Rat
1331773Scl26Serum cholesterol level QTL 263.065blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)54372665686724018Rat
1331801Rf33Renal function QTL 334.149kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)543726656129132602Rat
1578766Tcas11Tongue tumor susceptibility QTL 114.12tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)546711509161317411Rat
1300115Hrtrt7Heart rate QTL 72.76heart pumping trait (VT:2000009)heart rate (CMO:0000002)54786906290099692Rat
9589025Epfw7Epididymal fat weight QTL 720.660.001epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)54946360094463600Rat
7411561Bw134Body weight QTL 134240.001body mass (VT:0001259)body weight gain (CMO:0000420)54946360094463600Rat
1576312Emca8Estrogen-induced mammary cancer QTL 84.1mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)550328551141643988Rat
2303615Vencon7Ventilatory control QTL 70.001respiration trait (VT:0001943)respiration rate (CMO:0000289)55098389595983895Rat
2303574Gluco42Glucose level QTL 422blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)55349671998496719Rat
61359EaexExperimental allergic encephalomyelitis QTL x3nervous system integrity trait (VT:0010566)post-insult time to onset of experimental autoimmune encephalomyelitis (CMO:0001422)555715622100715622Rat
70189Mcs5Mammary carcinoma susceptibility QTL 510.51mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)555805606132207589Rat
1358895Bp254Blood pressure QTL 2543.60.0003arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)558829236128034027Rat
61426Scl2Serum cholesterol level QTL 27.30.001blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)559793399143070159Rat
2316954Rf57Renal function QTL 570kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)55979352890450144Rat
2316957Pur21Proteinuria QTL 216.2urine protein amount (VT:0005160)urine protein level (CMO:0000591)559793528113558156Rat
61386Bp49Blood pressure QTL 4916.6cerebrum integrity trait (VT:0010549)brain infarction volume (CMO:0001013)56029343498603051Rat
61393Bp7Blood pressure QTL 74.50.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)560293434161481680Rat
1598814Mcs13Mammary carcinoma susceptibility QTL 130.0001mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)56319089069927503Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene 24190 UniSTS
UniSTS 212443 UniSTS