RH127871 Marker Search Result - Rat Genome Database

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Keyword

General

Marker: RH127871

Symbol:

RH127871

Also known as:

AA858869;

Expected Size:

202 (bp)

Position

Map	Chr	Position	Source
Rat Cytogenetic Map	10	q22	UniSTS
RGSC Genome Assembly v5.0	10	45,109,710 - 45,109,911	UniSTS
RGSC Genome Assembly v3.4	10	45,302,220 - 45,302,421	UniSTS
Rat Celera Assembly	10	43,055,755 - 43,055,956	UniSTS
RH 3.4	10	501.6	UniSTS

Is Marker For:

Genes: Obscn

Model

Launch Genome Browser (GBrowse) for Chr10:45302220..45302421

Annotation

References - curated

Strains and Sequence

Sequence

Region

Genes in Region (RGSC Genome Assembly v3.4)

Nucleotide Sequences

QTLs in Region (RGSC Genome Assembly v3.4)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
631554	Bp133	Blood pressure QTL 133		.005	Blood pressure	systolic	10	666709	65072453	Rat
1581497	Esta1	Estrogen-induced thymic atrophy QTL 1			Gland mass	thymus	10	4831560	67678060	Rat
2298544	Neuinf9	Neuroinflammation QTL 9	4.6		Neuroinflammation		10	5761138	65668639	Rat
61427	Cia16	Collagen induced arthritis QTL 16	3.2		Joint/bone inflammation	type II collagen induced	10	6380753	100633982	Rat
1578761	Stresp21	Stress response QTL 21	3.3		Stress response	thymus weight	10	7041744	52041744	Rat
2303118	Mamtr7	Mammary tumor resistance QTL 7		.003	Mammary tumor resistance		10	9762188	108776963	Rat
2301967	Cm73	Cardiac mass QTL 73	4.55		Cardiac mass	left ventricle	10	14721135	92841289	Rat
2316949	Gluco60	Glucose level QTL 60	3.7		Glucose level	postprandial	10	14721135	154166503	Rat
631268	Cia21	Collagen induced arthritis QTL 21	3.1		Joint/bone inflammation	arthritis severity	10	14721135	159833317	Rat
1354587	Kidm21	Kidney mass QTL 21	3.3		Kidney mass	left kidney mass adjusted for body weight	10	15274216	62791536	Rat
631564	Apr3	Acute phase response QTL 3	3.9		IL-6 level	pristane induced	10	16579339	61579339	Rat
6893350	Bw99	Body weight QTL 99	.87	.16	Body weight		1	17185640	62185640	Rat
6893352	Bw100	Body weight QTL 100	.33	.6	Body weight		1	17185640	62185640	Rat
631532	Cm50	Cardiac mass QTL 50	6.6		Cardiac mass		10	18217625	53793117	Rat
1598852	Anxrr19	Anxiety related response QTL 19	5.07		Anxiety response	open field test- rearing	10	19468218	64468218	Rat
1554317	Bmd4	Bone mineral density QTL 4	9.4	.0001	Bone mineral density	spine volumetric BMD by pQCT	10	20233281	104013574	Rat
70223	Bp57	Blood pressure QTL 57	5		Blood pressure	indirect systolic	10	21607719	84443989	Rat
70188	BpQTLcluster1	Blood pressure QTL cluster 1	4.82		Blood pressure		1	21607719	91471072	Rat
70198	BpQTLcluster9	Blood pressure QTL cluster 9	2.94		Blood pressure		10	21607719	91471072	Rat
724556	Pur2	Proteinuria QTL 2	5.5		Renal function		10	22915259	95066632	Rat
1581559	Eae18	Experimental allergic encephalomyelitis QTL 18		.00002	Brain/spinal cord inflammation	demyelination	10	23843272	68843272	Rat
61354	Pia10	Pristane induced arthritis QTL 10		.01	Joint/bone inflammation	pristane induced	10	24006429	160657542	Rat
631267	Cia20	Collagen induced arthritis QTL 20	3.2		Joint/bone inflammation	arthritis severity	10	24006429	160657542	Rat
61325	Aia5	Adjuvant induced arthritis QTL 5		.01	Joint/bone inflammation	arthritis severity	10	24006429	160657542	Rat
634329	Pia15	Pristane induced arthritis QTL 15	3.1		Joint/bone inflammation	arthritis severity	10	24731630	47777990	Rat
70224	Eae3	Experimental allergic encephalomyelitis QTL 3	4.1		Brain/spinal cord inflammation	severity of disease	10	27184741	67678060	Rat
1298069	Bp168	Blood pressure QTL 168	5.5		Blood pressure	salt-loaded systolic	10	27184741	102587587	Rat
631542	Bp82	Blood pressure QTL 82	6.8		Blood pressure	systolic	10	27184741	103551039	Rat
2300171	Bmd58	Bone mineral density QTL 58	4.9	.0001	Bone mineral density		10	28599269	73599269	Rat
1600371	Mcs21	Mammary carcinoma susceptibility QTL 21	3		Mammary tumor susceptibility		10	29541648	54220239	Rat
1331762	Rf40	Renal function QTL 40	3.873		Renal function	renal vascular resistance	10	29974190	65379965	Rat
1331791	Cm31	Cardiac mass QTL 31	3.84606		Cardiac mass		10	29974190	95369088	Rat
2292439	Bp309	Blood pressure QTL 309			Blood pressure	arterial	10	30428239	75428239	Rat
1579918	Bp279	Blood pressure QTL 279		.01	Blood pressure	mean arterial pressure	10	31098661	76098661	Rat
2292441	Bp308	Blood pressure QTL 308			Blood pressure	arterial	10	31098661	76098661	Rat
1578779	Tcas10	Tongue tumor susceptibility QTL 10	3.12		Tongue tumor susceptibility	tongue tumor number	10	33351756	78351756	Rat
631557	Bp136	Blood pressure QTL 136		.003	Blood pressure		10	34229233	79229233	Rat
1576311	Pia26	Pristane induced arthritis QTL 26			Joint/bone inflammation	pristane induced	10	35131252	76591208	Rat
1576319	Cia29	Collagen induced arthritis QTL 29			Joint/bone inflammation	type II collagen-induced	10	35131252	95695218	Rat
61332	Eau3	Experimental allergic uveoretinitis QTL 3		.004	Uvea inflammation score		10	35713452	101848683	Rat
6893342	Cm78	Cardiac mass QTL 78	.1	.88	Cardiac mass	body weight adjusted	10	36254741	83528010	Rat
631552	Vetf2	Vascular elastic tissue fragility QTL 2	4.5	.0002	Vascular lesion number	aorta	10	36254741	95369088	Rat
1354614	Hpcl1	Hepatic cholesterol level QTL 1	3.3		Lipid level	cholesterol	10	36649906	53800677	Rat
1358897	Stresp6	Stress response QTL 6	4.17	.022	Hormone level	norepinephrine	10	36649906	65379965	Rat
61441	Btemp1	Thermal response to stress QTL 1	4		Body temperature	under stress	10	36650094	64860949	Rat
2317042	Aia20	Adjuvant induced arthritis QTL 20	3.38		Joint/bone inflammation	adjuvant induced	10	41317054	86317054	Rat
2317043	Aia7	Adjuvant induced arthritis QTL 7	3.82		Joint/bone inflammation	adjuvant induced	10	41317054	86317054	Rat
631270	Cia23	Collagen induced arthritis QTL 23	3.9		Joint/bone inflammation	arthritis severity	10	41339689	152260081	Rat
631269	Cia22	Collagen induced arthritis QTL 22	8.9		Joint/bone inflammation	arthritis severity	10	41339689	152260081	Rat
724527	Bp148	Blood pressure QTL 148		.0001	Blood pressure		10	42272656	87272656	Rat
61463	Bp12	Blood pressure QTL 12	6.3	.0001	Blood pressure	salt-loaded systolic	10	42554668	87554668	Rat
1298078	Stresp5	Stress response QTL 5	2.99	.00025	Hormone level	corticosterone	10	43458380	108776963	Rat

Additional Information

External Database Links

More on RH127871
	Genome Browser
	Ensembl
	NCBI

RGD Object Information
RGD ID:	5039726
Created:	2011-03-04
Species:	Rattus norvegicus
Last Modified:	2013-05-16
Status:	ACTIVE