RH129698 Marker Search Result - Rat Genome Database

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Marker: RH129698

Symbol: RH129698
Previously known as: AA965256; 
RGD ID: 5025796
Expected Size: 189 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2968,437,563 - 68,437,752 (+)MAPPERmRatBN7.2
Rnor_6.0973,937,870 - 73,938,058NCBIRnor6.0
Rnor_5.0973,369,648 - 73,369,836UniSTSRnor5.0
RGSC_v3.4965,717,147 - 65,717,335UniSTSRGSC3.4
Celera965,916,703 - 65,916,891UniSTS
RH 3.4 Map9615.2UniSTS
Cytogenetic Map9q32UniSTS
Is Marker For: Genes:   Myl1  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer GTTGTGGACCCAAGTAGATCAT
Reverse Primer CAGTTCAAGAACACCTATGGCT
 

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1598796Myl1myosin, light chain 196843751468458256Rat

Nucleotide Sequences
RefSeq Transcripts NM_001077656 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_020104 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide FQ214580 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ214604 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ214608 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ214631 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ214638 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ214656 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ214675 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ214712 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ214727 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ214742 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ214873 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ214939 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ215002 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ215050 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ215083 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ215086 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ215201 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ215229 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ215239 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ215325 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ215340 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ215418 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ215435 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ215492 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ215500 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ215535 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ215557 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ215563 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ215578 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ215610 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ215748 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ215766 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ215820 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ215848 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ215875 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ215911 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ215933 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ215985 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ216034 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ216060 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ216109 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ216124 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ216181 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ216192 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ216213 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ216218 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ216229 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ216238 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ216308 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ216407 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ216437 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ216452 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ216455 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ216484 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ216496 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ216525 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ216543 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ216556 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ216565 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ216567 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ216631 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ216654 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ216704 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ216737 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ216738 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ216889 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ217074 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ217103 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ217157 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ217192 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ217218 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ217243 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ217303 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ217323 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ217387 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ217394 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ217427 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ217481 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ217753 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ217756 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ217889 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ217973 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ217979 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218049 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ223632 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ223641 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ223687 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ223755 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ223779 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ223827 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ223880 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ223949 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ223984 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ224047 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ224050 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ224087 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ224112 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ224155 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ224171 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ224172 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ224212 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ224254 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ224277 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ224321 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ224330 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ224386 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ224411 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ224420 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ224452 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ224519 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ224609 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ224645 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ224663 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ224726 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ224796 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ224799 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ224867 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ224927 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ224931 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ224934 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  L00088 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M12022 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
731164Uae25Urinary albumin excretion QTL 253.50.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)925661188100929786Rat
631656Bp108Blood pressure QTL 1085.970.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)94859825193598251Rat
6903941Pur31Proteinuria QTL 310.036urine total protein amount (VT:0000032)urine protein excretion rate (CMO:0000759)94019418885194188Rat
7207814Bmd91Bone mineral density QTL 913.5femur size trait (VT:1000369)femoral neck cross-sectional area (CMO:0001697)92375414483851531Rat
7411656Foco26Food consumption QTL 269.80.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)93253550577535505Rat
7411571Bw138Body weight QTL 13814.30.001body mass (VT:0001259)body weight gain (CMO:0000420)93253550577535505Rat
8662828Vetf6Vascular elastic tissue fragility QTL 63.9artery integrity trait (VT:0010639)patent ductus arteriosus score (CMO:0002566)93696235992058970Rat
10054125Srcrt7Stress Responsive Cort QTL 73.330.0011blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)9187073594Rat
10058949Gmadr5Adrenal mass QTL 520.014adrenal gland mass (VT:0010420)both adrenal glands wet weight to body weight ratio (CMO:0002411)94279151387976209Rat
1300134Bp185Blood pressure QTL 1853.73arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)961381434104821652Rat
1581580Uae34Urinary albumin excretion QTL 34urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)96207227596470995Rat
1598834Memor11Memory QTL 112.5exploratory behavior trait (VT:0010471)average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)93696235977814038Rat
1598849Memor17Memory QTL 172.2exploratory behavior trait (VT:0010471)difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)94996854671098346Rat
1578757Pur6Proteinuria QTL 63.30.005urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)96207227596470995Rat
61352Bp34Blood pressure QTL 345arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)94249534379271511Rat
61385Edpm9Estrogen-dependent pituitary mass QTL 93.430.05pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)963869687108869687Rat
70186Niddm26Non-insulin dependent diabetes mellitus QTL 263.87blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)92207116986369743Rat
70218Cm28Cardiac mass QTL 288.30.0001heart mass (VT:0007028)heart wet weight (CMO:0000069)92526804479271759Rat
2290450Scl57Serum cholesterol level QTL 574.15blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)93696235995410867Rat
724515Uae16Urinary albumin excretion QTL 168urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)958163035100929646Rat
724544Uae9Urinary albumin excretion QTL 94.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)925268044114175309Rat
2303180Bp333Blood pressure QTL 3330.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)95662771378595166Rat
2303180Bp333Blood pressure QTL 3330.001arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)95662771378595166Rat
2303180Bp333Blood pressure QTL 3330.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)95662771378595166Rat
12879506Pur33Proteinuria QTL 33urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)94464992189649921Rat
731171Glom6Glomerulus QTL 62.80.0003kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)964573531109573531Rat
11353949Bp393Blood pressure QTL 393arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)94019418885194188Rat
1641894Alcrsp12Alcohol response QTL 12response to alcohol trait (VT:0010489)brain neurotensin receptor 1 density (CMO:0002068)92746863972468639Rat
1578760Cm53Cardiac mass QTL 533.30.0001heart mass (VT:0007028)heart wet weight (CMO:0000069)956771635101771635Rat
2303170Bp332Blood pressure QTL 3323.730.027arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)95584784177026453Rat
11353951Bp394Blood pressure QTL 394arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)94464992189649921Rat
11353957Bmd92Bone mineral density QTL 920.01tibia mineral mass (VT:1000283)volumetric bone mineral density (CMO:0001553)94611419991114199Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene 56781 UniSTS
UniSTS 212994 UniSTS