D15Got43 Marker Search Result - Rat Genome Database

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Keyword

General

Marker: D15Got43

Symbol:

D15Got43

Also known as:

OT10.05; oxsts338;

Expected Size:

164 (bp)

Position

Map	Chr	Position	Source
Rat Cytogenetic Map	15	p12	UniSTS
RGSC Genome Assembly v5.0	15	51,542,543 - 51,542,710	UniSTS
RGSC Genome Assembly v3.4	15	43,748,068 - 43,748,235	UniSTS
RGSC Genome Assembly v3.4	15	43,748,067 - 43,748,235	RGD
Rat Celera Assembly	15	38,345,236 - 38,345,403	UniSTS
Genome Assembly 3.1	15	43,763,768 - 43,763,935	RGD
RH 3.4	15	289.9	RGD
RH 3.4	15	289.9	UniSTS
RH 2.0	15	261.3	RGD

Is Marker For:

Genes: Msra

Model

Launch Genome Browser (GBrowse) for Chr15:43748067..43748235

Annotation

References - curated

Strains and Sequence

Sequence

Region

Genes in Region (RGSC Genome Assembly v3.4)

Nucleotide Sequences

QTLs in Region (RGSC Genome Assembly v3.4)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
731170	Pur3	Proteinuria QTL 3	2.3	.0005	Renal function	urine albumin level	15	1	44351302	Rat
1641887	Alcrsp14	Alcohol response QTL 14			Alcohol response		15	1	44953103	Rat
2298549	Neuinf12	Neuroinflammation QTL 12	2.2		Neuroinflammation		15	1	61161186	Rat
1582251	Gluco24	Glucose level QTL 24	3.2	.0008	Glucose level	uptake	15	10138595	55138595	Rat
2317750	Glom26	Glomerulus QTL 26	4.3		Renal pathology	urine protein level	15	14072029	71533203	Rat
2293688	Bss29	Bone structure and strength QTL 29	5.31	.0001	Bone structure		15	16042557	61042557	Rat
2300167	Bmd63	Bone mineral density QTL 63	5.9	.0001	Bone mineral density		15	16042557	61042557	Rat
2300173	Bmd62	Bone mineral density QTL 62	12.8	.0001	Bone mineral density		15	16042557	61042557	Rat
5685002	Bss103	Bone structure and strength QTL 103	2.8		Bone strength	work to fail	15	16365832	61365832	Rat
631273	Cati2	Cataract Ihara QTL 2		.001	Cataract susceptibility	time of onset	15	16458810	61458810	Rat
61424	Scl1	Serum cholesterol level QTL 1	7.7	.001	Lipid level	cholesterol	15	18710622	87898700	Rat
1331729	Rf42	Renal function QTL 42	3.071		Renal function	renal blood flow	15	19348148	80362100	Rat
2324620	Coatc3	Coat color QTL 3			Coat color	hooded	15	22452603	51526246	Rat
1578660	Bss19	Bone structure and strength QTL 19	4.3		Bone structure	femoral neck trabecular area	15	25506124	106177917	Rat
1578646	Bmd18	Bone mineral density QTL 18	5.2		Bone mineral density	femoral neck trabecular vBMD	15	25506124	106177917	Rat
1578647	Bmd17	Bone mineral density QTL 17	4		Bone mineral density	femoral neck total vBMD	15	25506124	106177917	Rat
1582242	Gluco28	Glucose level QTL 28	3.3	.0008	Glucose level	uptake	15	32638412	89569864	Rat
1582244	Bw79	Body weight QTL 79	4	.0002	Body fat amount	adiposity index	15	32638412	89569864	Rat
1582214	Stl21	Serum triglyceride level QTL 21	3.1	.022	Lipid level	triglyceride	15	32638412	89569864	Rat
1582227	Gluco30	Glucose level QTL 30	3.6	.0003	Glucose level	uptake	15	32638412	89569864	Rat
1582228	Epfw3	Epididymal fat weight QTL 3	4.1	.0002	Epididymal fat weight		15	32638412	89569864	Rat
2293686	Bmd36	Bone mineral density QTL 36	7.4	.0001	Bone mineral density		15	38542355	78048493	Rat
2293691	Bmd37	Bone mineral density QTL 37	6.6	.0001	Bone mineral density		15	38542355	78048493	Rat
1598828	Glom14	Glomerulus QTL 14	2.5		Renal pathology	glomerular injury score	15	40091127	85091127	Rat

Additional Information

External Database Links

More on D15Got43
	Genome Browser
	Ensembl
	NCBI

RGD Object Information
RGD ID:	45263
Created:	2000-05-26
Species:	Rattus norvegicus
Last Modified:	2013-05-16
Status:	ACTIVE