D8Rat186 Marker Search Result - Rat Genome Database

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Marker: D8Rat186

Symbol: D8Rat186
Previously known as: R0257-A03; oxsts11552; 
RGD ID: 42855
Expected Size: 155 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_6.0857,577,534 - 57,577,672NCBIRnor6.0
Rnor_5.0856,155,039 - 56,155,177UniSTSRnor5.0
RGSC_v3.4856,460,598 - 56,460,742UniSTSRGSC3.4
Celera852,894,829 - 52,894,976UniSTS
SHRSP x BN Map839.17RGD
SHRSP x BN Map839.17UniSTS


Annotation


References - curated
# Reference Title Reference Citation
1. Data downloaded from Wellcome Trust, University of Oxford Data downloaded from Wellcome Trust, University of Oxford
2. Rat Genetic Map Data Rat Genetic Map Data, Whitehead Institute for Biomedical Research/MIT Center for Genome Research Website, http://waldo.wi.mit.edu/rat/public/distribution/rat_sslp_releases/jan00/
3. Electronic Transfer of SSLP Data Rat Genetic Mapping Project, Whitehead Institute for Biomedical Research. APR. 2001.
4. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer AAGCCAAGAGTAGACGCTGC
Reverse Primer CCACACACATCTTGGTCACA
 
Template 
TCTCTAGAGGATCCCCCTCTTCAAGGAAGCCAAGAGTAGACGCTGCCGTTTTGCTGCTTAGCAC
GGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATACAACAGTACTT
GGTTGTTGCTGACTCGATGTTCTAGTCGTTNCATGTGACCAAGATGTGTGTGGATACCATGTCA
CACACTTCACACAGCACTTCAAAGGGCATTTTCCTGGNCACACAGATAAACCATNCTGNAACTA
CTACAGTTGAGGAGGGGTACCGAGTCNCGAATTTCGTAATNCATGGTTCATAGCNGTTTACCGT
GTGAAATTGTTATCCGNTCACAATTCCCACACAACATACGAGCCGGAAGCATAAAGTGTAAAGC
CGGGGTGCCAATGAGTGAGNTAACNCACATTAATTGCGTTGNGCNCACTGCCCGTTT

Region

Nucleotide Sequences
GenBank Nucleotide CH473975 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000238 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
UniSTS 228256 UniSTS