D15Rat151 Marker Search Result - Rat Genome Database

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Marker: D15Rat151

Symbol: D15Rat151
Previously known as: R0350-B03; oxsts9657; 
RGD ID: 42407
Expected Size: 234 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_6.01575,912,252 - 75,913,292NCBIRnor6.0
Rnor_5.01579,468,740 - 79,468,891NCBIRnor5.0
Rnor_5.01579,468,739 - 79,468,891NCBIRnor5.0
RGSC_v3.41574,927,137 - 74,927,364RGDRGSC3.4
RGSC_v3.41574,927,138 - 74,927,364UniSTSRGSC3.4
RGSC_v3.11574,942,917 - 74,943,144RGD
Celera1567,877,268 - 67,877,498UniSTS
SHRSP x BN Map1541.4298UniSTS
SHRSP x BN Map1541.4298RGD
FHH x ACI Map1558.06RGD


Annotation


References - curated
# Reference Title Reference Citation
1. Data downloaded from Wellcome Trust, University of Oxford Data downloaded from Wellcome Trust, University of Oxford
2. Rat Genetic Map Data Rat Genetic Map Data, Whitehead Institute for Biomedical Research/MIT Center for Genome Research Website, http://waldo.wi.mit.edu/rat/public/distribution/rat_sslp_releases/jan00/
3. Electronic Transfer of SSLP Data Rat Genetic Mapping Project, Whitehead Institute for Biomedical Research. APR. 2001.
4. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer GGGAGGATGAATGTGGGTAG
Reverse Primer TCCCTGCCTATCTCTTTACACC
 
Template 
AGGATCCCCACATCTGAGTCATAGTGCTTGTGCAATAGATTCTTTAAAAGCATCTGTGGCAATG
TGAAGGTTTGATAAGTGGGGAGGATGAATGTGGGTAGTGTAAGCTGTGCAAAACAATTGACAAA
GTAGAGAAGAGTCTTAATCATTGNTATATCTTCAGTCAGACCAGAGAGGAATATATCTGTGTAT
GCTAAATTTGTATTTATGACACTGGGCTGAACAGTGTGTGTGGGTGCGTGTGTGTGTGTGTGTG
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTATACCTTTGGTGTAAAGAGATAGGCAGGGACTATA
TTGGNCATTACTATGATATATTCAGGAATTTGTGGGTACCGAGACTACGAATTCGTAATCATGG
TCATAGCTGTTTGCCTGTGTGAAATTGTTATCCGCTCACAATTCCACACAACATACGAGCCGGA
AGCATAAAGTGTAAAGCCTGGGGTGCCTAATGAGTGAGCTAACTCACATTAATTGCGTTGGCNC
ACTGCCCGCTTTCCAGTCGGGAAACCGTCGTGCCAGCTGCATTAATGAATCGGCCAACGCGCGG
GGAGAGGNGGTTTGCGTATTGGGCGCCAGGGTGGTTTTTCTTTCACCAGTGAGACGGGCAACAG
TGATTGCCCTTCACCGCCTGGCCCGAGAGATTGCAGCAANGGTCCACCGGTTTGCCCAGCAGCA
AAATCCGTTGAGGTGGTTCCGAATCGCAAATCCTATNATCNANTAGCCGAATAGGTTGAGTGTG
TCAGTTGNNNGATCNTTTAANCGGGATCNGNAAGGNANACGTCTANNG

Region

Nucleotide Sequences
GenBank Nucleotide FT224635 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
UniSTS 226711 UniSTS