D8Arb24 Marker Search Result - Rat Genome Database

General

Marker: D8Arb24

Symbol:

D8Arb24

Previously known as:

R0268-A04; oxsts7963;

RGD ID:

42236

Expected Size:

190 (bp)

Position

Rat Assembly	Chr	Position (strand)	Source	JBrowse
Rnor_6.0	8	33,155,333 - 33,155,515	NCBI	Rnor6.0
RGSC_v3.4	8	31,766,837 - 31,767,074	RGD	RGSC3.4
RGSC_v3.4	8	31,766,838 - 31,767,074	UniSTS	RGSC3.4
RGSC_v3.1	8	31,775,603 - 31,775,840	RGD
Celera	8	31,902,370 - 31,902,558	UniSTS
FHH x ACI Map	8	24.3	UniSTS
FHH x ACI Map	8	24.3	RGD
Cytogenetic Map	8	q21	UniSTS

Is Marker For:

Strains: AVN/Orl BBDP/Rhw BBDR/Rhw BC/CpbU BDIX/Han BDVII/Cub BN/SsNHsd BP/Cub BUF/Pit DA/PitN DON/Melb F344/Pit FHH/Eur IS/Kyo LE/Mol LH/Mav MNRA/N WN/N WKY/OlaHsd WTC/Kyo LOU/CHan MNR/N MR/Pit ODU/N WF/Pit WIST/Nhg SR/Jr MNS/Gib OKA/Wsl OM/Ztm P5C PVG/Pit SD/Rij SHR/OlaHsd SHRSP/Riv WAG/RijKyo GK/KyoSwe M520/N ACI/N BN-Lx/Cub LN/Mav GH/Omr NEDH/K SS/Jr COP/OlaHsd
Genes: Arhgap32

Annotation

References - curated

#	Reference Title	Reference Citation
1.	Data downloaded from Wellcome Trust, University of Oxford	Data downloaded from Wellcome Trust, University of Oxford
2.	Rat Genetic Map Data	Rat Genetic Map Data, Whitehead Institute for Biomedical Research/MIT Center for Genome Research Website, http://waldo.wi.mit.edu/rat/public/distribution/rat_sslp_releases/jan00/
3.	Electronic Transfer of SSLP Data	Rat Genetic Mapping Project, Whitehead Institute for Biomedical Research. APR. 2001.
4.	UniSTS Pipeline	RGD automated pipelines
5.	Electronic Submission of SSLP Data Sets	Wilder R. Oct.2000. National Institute of Arthritis and Musculoskeletal and Skin Diseases, ARB Rat Genetic Database

Strains and Sequence

Sequence


Forward Primer	TTCTTGACCTGCCTCTCTC
Reverse Primer	TTGCAGATCTCTGAGGTCC

Strain Variation

Strain, Expected Size(s)

ACI/N	199
AVN/Orl	189
BBDP/Rhw	189
BBDR/Rhw	189
BC/CpbU	199
BDIX/Han	199
BDVII/Cub	201
BN-Lx/Cub	197
BN/SsNHsd	197
BP/Cub	189
BUF/Pit	189
COP/OlaHsd	189

DA/PitN	201
DON/Melb	189
F344/Pit	189
FHH/Eur	189
GH/Omr	203
GK/KyoSwe	197
IS/Kyo	197
LE/Mol	201
LH/Mav	203
LN/Mav	189
LOU/CHan	199
M520/N	189

MNR/N	199
MNRA/N	189
MNS/Gib	189
MR/Pit	199
NEDH/K	189
ODU/N	197
OKA/Wsl	197
OM/Ztm	203
P5C	189
PVG/Pit	189
SD/Rij	189
SHR/OlaHsd	197

SHRSP/Riv	197
SR/Jr	189
SS/Jr	203
WAG/RijKyo	199
WF/Pit	203
WIST/Nhg	189
WKY/OlaHsd	197
WN/N	189
WTC/Kyo	197

Region

Nucleotide Sequences


GenBank Nucleotide	CH474007	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM000238	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Additional Information

RGD Curation Notes

Note Type	Note	Reference

External Database Links

Database	Acc Id	Source(s)
NCBI Gene	315530	UniSTS
UniSTS	228201	UniSTS

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Marker: D8Arb24