D1Rat175 Marker Search Result - Rat Genome Database

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Marker: D1Rat175

Symbol: D1Rat175
Previously known as: R0055-B07; oxsts6592; 
RGD ID: 37398
Expected Size: 119 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
FHH x ACI Map1130.2499UniSTS
FHH x ACI Map1130.2499RGD
Is Marker For: Strains:   AVN/Orl   BBDP/Rhw   BBDR/Rhw   BC/CpbU   BDVII/Cub   BN/SsNHsd   BP/Cub   DA/PitN   DON/Melb   F344/Pit   FHH/Eur   IS/Kyo   LEW/Pit   LH/Mav   MHS/Gib   MNRA/N   WTC/Kyo   LOU/CHan   MNR/N   MR/Pit   ODU/N   WF/Pit   WIST/Nhg   SR/Jr   MNS/Gib   NP9   OKA/Wsl   OM/Ztm   P5C   PVG/Pit   SD/Rij   SHR/OlaHsd   SHRSP/Riv   WAG/RijKyo   GK/KyoSwe   M520/N   ACI/N   BN-Lx/Cub   LN/Mav   GH/Omr   NEDH/K   F344.GK-(D1Rat175-D1Rat90)/Swe  
QTLs:   Bw123  


Annotation


References - curated
# Reference Title Reference Citation
1. Data downloaded from Wellcome Trust, University of Oxford Data downloaded from Wellcome Trust, University of Oxford
2. Rat Genetic Map Data Rat Genetic Map Data, Whitehead Institute for Biomedical Research/MIT Center for Genome Research Website, http://waldo.wi.mit.edu/rat/public/distribution/rat_sslp_releases/jan00/
3. Electronic Transfer of SSLP Data Rat Genetic Mapping Project, Whitehead Institute for Biomedical Research. APR. 2001.
4. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer AGGAGAAAACCAGCTCCTCC
Reverse Primer GTGTGTGTCGTCGCGAGA
 
Template 
AGGATCAGGACGTGTCATGACCAGTCATCCGGGGTAGGCATGAGCNCGAGAGGGTTCCTGAGCT
GGCACTGGNAGCTCTAGGTTCATTGCNCAGATNCTCTTTNAGAATCAAAAAGTGATACCCANAG
TNTTGAATTACTAGACTTGTGTGCTTGTGTGTGTGTGTGTGTGTGTGTGTNCGTCCCCGTGTGT
GTCGTCGCGAGANCNCNCNCNCGCNCNCNCNCNCNCNCNCNCNCNCNCNAGAGCAGGCANGTGA
GTGAGTGTNNAGNAGTNAGAGGACAGCTTGGAGGAGCTGGTTTTCTCCTTGCACCACGGGGTCT
GCCAGGTATGGTGCAGGCCGNAGGGTGTGGTGGAGGTGGGTACGAGCGGTAATTCGTAATNGGG
GTTATAGCTGTCTCCTGTGTGAAAGTGTTAGCCGCCCACAATTCCATACAAGATACGAGNGGGA
ANTATAAAGTGTANAGNTGGGGTGCATATNAGTGNNNACNNACNNNANNNNNGNNNA

Region

Nucleotide Sequences


Additional Information

Database Acc Id Source(s)
NCBI Gene 100303243 UniSTS
UniSTS 227049 UniSTS