D2Rat49 Marker Search Result - Rat Genome Database

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Keyword

General

Marker: D2Rat49

Symbol:

D2Rat49

Also known as:

R0035-A03; oxsts6868; R035-A03;

Expected Size:

131 (bp)

Position

Map	Chr	Position	Source
RGSC Genome Assembly v5.0	2	224,467,722 - 224,467,852	UniSTS
RGSC Genome Assembly v3.4	2	197,733,619 - 197,733,750	RGD
RGSC Genome Assembly v3.4	2	197,733,620 - 197,733,750	UniSTS
Rat Celera Assembly	2	182,474,285 - 182,474,415	UniSTS
Genome Assembly 3.1	2	197,696,374 - 197,696,504	RGD
RH 3.4	2	1299.2	UniSTS
RH 3.4	2	1299.2	RGD
RH 2.0	2	979.7	RGD
SHRSP x BN	2	74.0098	RGD

Model

Launch Genome Browser (GBrowse) for Chr2:197733619..197733750

Annotation

References - curated

Strains and Sequence

Sequence

Strain Variation

Region

Nucleotide Sequences

QTLs in Region (RGSC Genome Assembly v3.4)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1578671	Bmd10	Bone mineral density QTL 10	5.4		Bone mineral density	femoral neck cortical vBMD	2	9670332	227150249	Rat
1358913	Cm41	Cardiac mass QTL 41	2.73		Cardiac mass		2	24474447	212169089	Rat
1358917	Cm42	Cardiac mass QTL 42	2.82		Cardiac mass		2	24474447	212169089	Rat
61467	Bp14	Blood pressure QTL 14	2.2		Blood pressure		2	42866342	210636008	Rat
631266	Bp132	Blood pressure QTL 132		.0005	Blood pressure	systolic	2	46542246	210636169	Rat
1331760	Bp206	Blood pressure QTL 206	3.62454		Blood pressure	time series calculation	2	56214854	210636169	Rat
1298080	Bp163	Blood pressure QTL 163		.02	Blood pressure	systolic	2	66680022	210636169	Rat
1354648	Bp239	Blood pressure QTL 239		.001	Blood pressure	systolic	2	66680209	235799396	Rat
1354605	Rf48	Renal function QTL 48	2.9		Creatinine level	serum	2	75806326	214989298	Rat
61374	Edpm2	Estrogen-dependent pituitary mass QTL 2	4.42	.86	Gland mass	pituitary	2	77630629	210636169	Rat
724534	Uae6	Urinary albumin excretion QTL 6	10		Renal function	urine albumin level	2	79796833	227150249	Rat
1581569	Uae32	Urinary albumin excretion QTL 32		.0001	Renal function	urine albumin level	2	79796977	227150051	Rat
1581576	Pur7	Proteinuria QTL 7		.0001	Renal function	urine protein level	2	79796977	227150051	Rat
1354622	Kidm16	Kidney mass QTL 16	3		Kidney mass	left kidney mass	2	82826122	231465091	Rat
1354649	Kidm17	Kidney mass QTL 17	2.9		Kidney mass	left kidney mass adjujsted for tibia length	2	82826122	236153712	Rat
631507	Bp105	Blood pressure QTL 105		.001	Blood pressure		2	116874922	221284686	Rat
634308	Sach6	Saccharin preference QTL 6	4.9		Consumption level	saccharin preference	2	116874922	221284686	Rat
1578648	Bss11	Bone structure and strength QTL 11	4.7		Bone structure	femoral neck cortical area	2	118264490	220244597	Rat
1554319	Bmd2	Bone mineral density QTL 2	13.4	.0001	Bone mineral density	spine area by pQCT	2	118264840	221131552	Rat
1300165	Rf9	Renal function QTL 9	3.28		Renal function	hypertension related glomerular damage	2	138700979	210636169	Rat
70175	BpQTLCluster3	Blood pressure QTL cluster 3	2.76		Blood pressure		2	140403692	210636008	Rat
1359022	Ppulsi1	Prepulse inhibition QTL 1	3.63		Prepulse inhibition		2	141755026	222281918	Rat
1331805	Cm29	Cardiac mass QTL 29	3.50746		Cardiac mass		2	146228221	232307864	Rat
1331794	Bp202	Blood pressure QTL 202	3.66819		Blood pressure	systolic	2	146228221	232307864	Rat
71113	Cari2	Carrageenan-induced inflammation QTL 2	2.7	.009	Carrageenan-induced inflammation		2	146659370	210636169	Rat
1581578	Cm49	Cardiac mass QTL 49	4.9	.01	Cardiac mass	left ventricle	2	148790600	227150249	Rat
1598833	Bp295	Blood pressure QTL 295	3.5		Blood pressure	systolic	2	154238265	199238265	Rat
1641925	Alcrsp2	Alcohol response QTL 2			Alcohol response	loss of righting reflex	2	155101972	230157845	Rat
1641891	Alcrsp17	Alcohol response QTL 17			Alcohol response	loss of righting reflex	2	155101972	247295816	Rat
631501	Bp101	Blood pressure QTL 101	2.4		Blood pressure	systolic	2	155920808	210636008	Rat
1354609	Niddm62	Non-insulin dependent diabetes mellitus QTL 62	4.72	.000006	Insulin level	post-pancreatectomy	2	156142685	210636169	Rat
2301966	Bp322	Blood pressure QTL 322	3.58		Blood pressure	systolic	2	156142685	210636169	Rat
724568	Uae13	Urinary albumin excretion QTL 13	4.4		Renal function	urine albumin level	2	161170272	218568266	Rat
1359032	Hrtrt18	Heart rate QTL 18			Heart rate	salt-induced bradycardia	2	163154227	200390471	Rat
1302793	Bw16	Body weight QTL 16	5	.0001	Body weight		2	163154358	210636008	Rat
1358900	Bw48	Body weight QTL 48	4.88		Body weight		2	163154358	227150051	Rat
1298074	Bp164	Blood pressure QTL 164		.003	Blood pressure	salt-loaded systolic	2	165636169	210636169	Rat
1298076	Bp166	Blood pressure QTL 166		.0009	Blood pressure	systolic	2	165636169	210636169	Rat
1298085	Bp165	Blood pressure QTL 165		.0006	Blood pressure	salt-loaded systolic	2	165636169	210636169	Rat
1358356	Srcrt1	Stress Responsive Cort QTL1	3.66		Hypothalamic-pituitary-adrenal axis	corticosterone post-stress	2	167857161	231465091	Rat
2306901	Bp337	Blood pressure QTL 337		.01	Blood pressure	salt-loaded systolic	2	170338294	236153712	Rat
1331734	Bp204	Blood pressure QTL 204	3.61192		Blood pressure	mean arterial	2	174730375	232307864	Rat
61469	Bp16	Blood pressure QTL 16	5.64		Blood pressure		2	177484675	222484675	Rat
70162	Bp63	Blood pressure QTL 63	5.64		Blood pressure		2	177484675	222484675	Rat
2293084	Iddm26	Insulin dependent diabetes mellitus QTL 26	2.9		Glucose level	insulin-dependent	2	181710214	222281918	Rat
1359031	Bp275	Blood pressure QTL 275			Blood pressure	systolic	2	183664122	228664122	Rat
2300189	Bmd48	Bone mineral density QTL 48	5.8	.0001	Bone mineral density		2	187512114	232512114	Rat
61417	Cia10	Collagen induced arthritis QTL 10	3.4		Joint/bone inflammation	type II collagen induced	2	188136088	233136088	Rat
4889834	Pur24	Proteinuria QTL 24	5.8	.014	Renal function	urine protein level	2	191378142	210636169	Rat
738013	Alc15	Alcohol consumption QTL 15	4.1	.00022	Consumption level	alcohol amount	2	192489056	237489056	Rat
61458	Bp10	Blood pressure QTL 10	3.42		Blood pressure	salt-loaded	2	196657749	224108082	Rat
1298083	Bp158	Blood pressure QTL 158	2.62		Blood pressure	salt-loaded	2	196657749	224108082	Rat
1331745	Bp203	Blood pressure QTL 203	4.377		Blood pressure	mean arterial	2	197256223	227310008	Rat
1581499	Esta2	Estrogen-induced thymic atrophy QTL 2			Gland mass	thymus	2	197256223	235940600	Rat
61366	Iddm3	Insulin dependent diabetes mellitus QTL 3	4.7		Glucose level		2	197256223	242256223	Rat
61398	Bp50	Blood pressure QTL 50	4.4		Blood pressure	systolic	2	197256223	242256223	Rat

Additional Information

External Database Links

More on D2Rat49
	Genome Browser
	Ensembl
	NCBI

RGD Object Information
RGD ID:	36323
Created:	2000-05-25
Species:	Rattus norvegicus
Last Modified:	2013-05-16
Status:	ACTIVE