SGC38161 Marker Search Result - Rat Genome Database

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Marker: SGC38161

Symbol: SGC38161
Previously known as: EST457238; 
RGD ID: 2172079
Expected Size: 264 (bp)
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37X106,143,414 - 106,143,677UniSTSGRCh37
Build 36X106,030,070 - 106,030,333RGDNCBI36
CeleraX106,614,799 - 106,615,062RGD
Cytogenetic MapXq22.3-q23UniSTS
Cytogenetic MapXq22.3UniSTS
HuRefX95,771,775 - 95,772,038UniSTS
GeneMap99-GB4 RH MapX293.07UniSTS
Whitehead-RH MapX269.8UniSTS
Is Marker For: Genes:   CLDN2   RIPPLY1  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer TACACACTGCCTTCCCTTCC
Reverse Primer TGACCATGGGAGGGTTCTAG
 

Region

Nucleotide Sequences
RefSeq Transcripts NM_001171092 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001171706 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_138382 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AF177340 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL591849 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC007652 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003470 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003518 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471120 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000274 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000484 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000513 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000685 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001631.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CT009680 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486224 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS990862 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000169 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL306143.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL583225 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH976428.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  N51709 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 9075 UniSTS
  92129 UniSTS
UniSTS SGC38161 UniSTS SSLP Pipeline