AFM178XC11 Marker Search Result - Rat Genome Database

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Marker: AFM178XC11

Symbol: AFM178XC11
Previously known as: W26; 178XC11; 
RGD ID: 2155098
Expected Size: 164 (bp)
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37Y4,993,766 - 4,993,928UniSTSGRCh37
GRCh37X91,158,636 - 91,158,797UniSTSGRCh37
Build 36X91,045,292 - 91,045,453RGDNCBI36
CeleraX91,657,256 - 91,657,418RGD
Cytogenetic MapYp11.2UniSTS
Cytogenetic MapXq21.3UniSTS
HuRefY2,830,982 - 2,831,144UniSTS
Whitehead-YAC Contig MapXY UniSTS
Is Marker For: Genes:   PCDH11Y   PCDH11X  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer GCTGATTTTCTACTTTAAAACTTGC
Reverse Primer GCTCAGGTTCCTCTATGTGC
 

Region

Nucleotide Sequences
GenBank Nucleotide AC004388 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC004478 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC010722 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003471 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003519 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471115 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000274 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000485 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000514 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000685 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000686 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001631.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CT009680 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486171 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS990809 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000169 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000181 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL583051 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH976428.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  Z66708 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 27328 UniSTS
  83259 UniSTS
UniSTS AFM178XC11 UniSTS SSLP Pipeline