D3S3929 Marker Search Result - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

Marker: D3S3929

Symbol: D3S3929
Previously known as: WI-8859; EST111158; GDB:678010; G00-678-010; 
RGD ID: 2121714
Expected Size: 123 (bp)
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37X100,792,418 - 100,792,540UniSTSGRCh37
GRCh373170,020,842 - 170,020,964UniSTSGRCh37
Build 36X100,679,074 - 100,679,196RGDNCBI36
CeleraX101,311,912 - 101,312,034RGD
Celera3168,420,526 - 168,420,648UniSTS
Cytogenetic Map3q26.3UniSTS
Cytogenetic MapXq22.1UniSTS
HuRef3167,390,732 - 167,390,854UniSTS
HuRefX90,600,493 - 90,600,615UniSTS
Whitehead-YAC Contig Map3 UniSTS
Is Marker For: Genes:   PRKCI  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer CATGCATTAAATGGCAACATG
Reverse Primer AGATTGATCAGTCTGAATTTGAAGG
 

Region

Nucleotide Sequences
RefSeq Transcripts NM_002740 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC073288 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC234775 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL133280 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC022016 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003450 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003470 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003498 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003518 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471052 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471115 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000254 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000274 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000464 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000484 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000493 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000513 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000665 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000685 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001611.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001631.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CT009680 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486015 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486318 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS990653 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS990956 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  G07019 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000035 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000169 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL583009 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL583051 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH806593.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH976318.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH976428.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  L18964 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  L33881 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  T57875 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 158948 UniSTS
  5584 UniSTS
UniSTS D3S3929 UniSTS SSLP Pipeline