SGC38378 Marker Search Result - Rat Genome Database

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Keyword

General

Marker: SGC38378

Symbol:

SGC38378

Also known as:

SGC38378; EST464943;

Expected Size:

275 (bp)

Position

Map	Chr	Position	Source
Human Whitehead-RH Map	15	75.5	UniSTS
Human GeneMap99-GB4 RH Map	15	146.69	UniSTS
Human Genome Assembly HuRef	15	13,947,974 - 13,948,247	UniSTS
Human Genome Assembly GRCh37	15	37,102,027 - 37,102,302	UniSTS
Human Celera Assembly	15	13,862,076 - 13,862,351	RGD
Human Genome Assembly Build 36	15	34,889,319 - 34,889,594	RGD
Human Cytogenetic Map	15	q14	UniSTS

Is Marker For:

Genes: C15orf41 CSNK1A1P1

Model

Launch Genome Browser (GBrowse) : build 36 (hg18) , build 37 (hg19)

Annotation

References - curated

Strains and Sequence

Sequence

Region

Genes in Region (Human Genome Assembly GRCh37)

Nucleotide Sequences

QTLs in Region (Human Genome Assembly GRCh37)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
2292947	PRSTS130_H	Prostate tumor susceptibility QTL 130 (human)	2.68		Prostate tumor susceptibility		15	12130899	38130899	Human
2293004	PRSTS125_H	Prostate tumor susceptibility QTL 125 (human)	2.21		Prostate tumor susceptibility		15	12130899	38130899	Human
1643445	SLIPL19_H	Serum lipid level QTL 19 (human)	2.3	.36	Lipid level		15	12680120	38680120	Human
2292774	PRSTS104_H	Prostate tumor susceptibility QTL 104 (human)	4.76		Prostate tumor susceptibility		15	14849787	40849787	Human
2292812	PRSTS100_H	Prostate tumor susceptibility QTL 100 (human)	3.49	.005	Prostate tumor susceptibility		15	14849787	40849787	Human
2292897	PRSTS103_H	Prostate tumor susceptibility QTL 103 (human)	4.05		Prostate tumor susceptibility		15	14849787	40849787	Human
2293472	PRSTS296_H	Prostate tumor susceptibility QTL 296 (human)		.027	Prostate tumor susceptibility		15	14849787	40849787	Human
2293469	PRSTS297_H	Prostate tumor susceptibility QTL 297 (human)		.029	Prostate tumor susceptibility		15	16869523	42869523	Human
1643521	BW295_H	Body Weight QTL 295 (human)	1.49		Body weight	BMI	15	18260718	44260718	Human
2289303	BW394_H	Body weight QTL 394 (human)	1.49		Body weight	BMI	15	18260718	44260718	Human
1643518	BW267_H	Body Weight QTL 267 (human)	1.6	.00308	Body weight	body mass index	15	18491570	44491570	Human
2293465	PRSTS285_H	Prostate tumor susceptibility QTL 285 (human)			Prostate tumor susceptibility		15	20090462	46090462	Human
2293482	PRSTS306_H	Prostate tumor susceptibility QTL 306 (human)		.001	Prostate tumor susceptibility		15	20090462	46090462	Human
2293364	PRSTS266_H	Prostate tumor susceptibility QTL 266 (human)			Prostate tumor susceptibility		15	20250762	46250762	Human
2293382	PRSTS267_H	Prostate tumor susceptibility QTL 267 (human)			Prostate tumor susceptibility		15	20250762	46250762	Human
2293405	PRSTS268_H	Prostate tumor susceptibility QTL 268 (human)			Prostate tumor susceptibility		15	20250762	46250762	Human
2289410	BW327_H	Body weight QTL 327 (human)	3.32	.0001	Body fat amount		15	20272334	46272334	Human
2289420	BW314_H	Body weight QTL 314 (human)	2.72	.0003	Body weight	lean mass	15	20272334	46272334	Human
2289430	BMD7_H	Bone mineral density QTL 7 (human)	3.32	.0001	Bone mineral density		15	20272334	46272334	Human
1559341	BW46_H	Body weight QTL 46 (human)	1.87	.004	Body weight	body mass index	15	20737849	46737849	Human
2316726	GLUCO284_H	Glucose level QTL 284 (human)	1.5	.00753	Glucose level		15	20737849	46737849	Human
1643523	BW284_H	Body Weight QTL 284 (human)	1.95	.0013	Body weight		15	22084112	48084112	Human
2289247	BW146_H	Body weight QTL 146 (human)	2.53	.0003	Body weight	BMI	15	25130800	66560180	Human
2314739	GLUCO86_H	Glucose level QTL 86 (human)	.8	.01	Glucose level	non-insulin dependent	15	26007629	52007629	Human
1558700	HRV1_H	Heart rate variability QTL 1 (human)	1.84		Heart rate variability	very low-frequency power	15	26219975	94521997	Human
1298444	BP32_H	Blood pressure QTL 32 (human)	2.69		Blood pressure	diastolic	15	27390682	102520755	Human
2316037	GLUCO219_H	Glucose level QTL 219 (human)		.00002	Glucose level		15	27582189	53582189	Human
2289561	BW440_H	Body weight QTL 440 (human)	2.61	.0004	Body morphometry	height	15	31260619	46374191	Human
2315896	GLUCO190_H	Glucose level QTL 190 (human)	1.47		Glucose level		15	33374099	59374099	Human
2314815	INSUL26_H	Insulin level QTL 26 (human)	2.41	.0068	Insulin level		15	33374099	59374099	Human
1559354	LDLPS4_H	Low density lipoprotein particle size QTL 4 (human)	2.2	.019	LDL particle size		15	35080297	66560180	Human

Additional Information

External Database Links

More on SGC38378
	Genome Browser:	(hg18) (hg19)
	Ensembl
	NCBI

RGD Object Information
RGD ID:	1772473
Created:	2008-01-13
Species:	Homo sapiens
Last Modified:	2013-05-13
Status:	ACTIVE