SHGC-582 Marker Search Result - Rat Genome Database

Symbol:

SHGC-582

Previously known as:

D8S2296E; GDB:3912713;

RGD ID:

1748489

Expected Size:

190 (bp)

Position

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	8	133,156,013 - 133,156,199	UniSTS	GRCh37
Build 36	8	133,225,195 - 133,225,381	RGD	NCBI36
Celera	8	129,331,708 - 129,331,897	RGD
Cytogenetic Map	8	q24	UniSTS
HuRef	8	128,473,526 - 128,473,715	UniSTS
TNG Radiation Hybrid Map	8	64776.0	UniSTS

Is Marker For:

Genes: KCNQ3

Annotation

References - curated

#	Reference Title	Reference Citation
1.	UniSTS Pipeline	RGD automated pipelines

Strains and Sequence

Sequence


Forward Primer	GACGATGTGTGTGAAAAGGATGG
Reverse Primer	ATATACTTATCTCATACGGAAGTGG

Region

Nucleotide Sequences


GenBank Nucleotide	AC011200	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC131042	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH003455	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH003503	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH471060	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM000259	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM000469	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM000498	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM000670	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM001616.1	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DS486190	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DS990828	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GL000067	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GL300213.1	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GL582985	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JH976342.1	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Additional Information

External Database Links

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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