GDB:435459 Marker Search Result - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

Marker: GDB:435459

Symbol: GDB:435459
Previously known as:
RGD ID: 1744195
Expected Size: 758 (bp)
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37125,021,275 - 5,022,032UniSTSGRCh37
Build 36124,891,536 - 4,892,293RGDNCBI36
Celera126,643,119 - 6,643,876RGD
Cytogenetic Map12p13.32UniSTS
HuRef124,878,055 - 4,878,812UniSTS
Is Marker For: Genes:   KCNA1  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer TTAAACATCGGTCAGTAGCTTGC
Reverse Primer CCAGCAAGACGGACTTCTTC
 

Region

Nucleotide Sequences
RefSeq Transcripts NM_000217 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC006063 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY412413 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC101733 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC112180 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003459 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003507 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471116 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000263 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000473 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000502 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000674 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001620.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486137 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS990775 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000105 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL583088 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH976379.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  L02750 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 3736 UniSTS
UniSTS GDB:435459 UniSTS SSLP Pipeline