SHGC-80010 Marker Search Result - Rat Genome Database

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Keyword

General

Marker: SHGC-80010

Symbol:

SHGC-80010

Also known as:

Expected Size:

344 (bp)

Position

Map	Chr	Position	Source
Human TNG Radiation Hybrid Map	16	34032.0	UniSTS
Human Genome Assembly HuRef	16	61,336,512 - 61,336,855	UniSTS
Human Genome Assembly GRCh37	16	75,582,842 - 75,583,185	UniSTS
Human Celera Assembly	16	59,877,144 - 59,877,487	RGD
Human Genome Assembly Build 36	16	74,140,343 - 74,140,686	RGD
Human Cytogenetic Map	16	q23.1	UniSTS

Is Marker For:

Genes: TMEM231

Model

Launch Genome Browser (GBrowse) : build 36 (hg18) , build 37 (hg19)

Annotation

References - curated

Strains and Sequence

Sequence

Region

Genes in Region (Human Genome Assembly GRCh37)

Nucleotide Sequences

QTLs in Region (Human Genome Assembly GRCh37)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1578609	SCL125_H	Serum cholesterol level QTL 125 (human)	1.5		Lipid level	triglyceride	16	6043155	86386413	Human
2292949	PRSTS151_H	Prostate tumor susceptibility QTL 151 (human)	5.13	.000055	Prostate tumor susceptibility		16	50598916	76598916	Human
2289460	BW216_H	Body weight QTL 216 (human)	1.57		Body weight	BMI	16	50598916	76598916	Human
2289478	SLEP18_H	Serum leptin level QTL 18 (human)	2.98		Hormone level	leptin	16	50598916	76598916	Human
2289240	BW147_H	Body weight QTL 147 (human)	2.54	.0003	Body weight	BMI	16	53670735	86516334	Human
1581527	BP70_H	Blood pressure QTL 70 (human)	2.2	.001	Blood pressure	pulse pressure	16	58735205	84735205	Human
1643055	BW115_H	Body Weight QTL 115 (human)	2.59	.00028	Body weight		16	58735205	84735205	Human
2289204	BW362_H	Body weight QTL 362 (human)		.0221	Body fat amount	percent fat	16	63683467	89683467	Human
2293479	PRSTS287_H	Prostate tumor susceptibility QTL 287 (human)			Prostate tumor susceptibility		16	66045003	90185220	Human
1358850	MULTSCL10_H	Multiple sclerosis susceptibility QTL 10 (human)			Multiple sclerosis susceptibility		16	66124225	90185220	Human
2301150	PRSTS400_H	Prostate tumor susceptibility QTL 400 (human)	1.59		Prostate tumor susceptibility		16	66124225	90185220	Human
1559231	SCL79_H	Serum cholesterol level QTL 79 (human)	2.62		Lipid level	triglyceride	16	66359506	90185220	Human
2302737	MAMTS24_H	Mammary tumor susceptibility QTL 24 (human)		.049	Mammary tumor susceptibility		17	69911496	90185220	Human
2302770	MAMTS23_H	Mammary tumor susceptibility QTL 23 (human)		.012	Mammary tumor susceptibility		16	69911496	90185220	Human
2299957	PRSTS332_H	Prostate tumor susceptibility QTL 332 (human)	1.07	.0132	Prostate tumor susceptibility		16	71735131	79124295	Human
1298488	RA26_H	Rheumatoid arthritis QTL 26 (human)		.0316	Joint/bone inflammation	rheumatoid arthritis	16	71735131	86513319	Human
1643062	BW162_H	Body weight QTL 162 (human)		.0207	Body fat amount	percent body fat	16	73386335	90185220	Human
2315801	GLUCO173_H	Glucose level QTL 173 (human)	1.48	.0045	Glucose level		16	73516239	90185220	Human

Additional Information

External Database Links

More on SHGC-80010
	Genome Browser:	(hg18) (hg19)
	Ensembl
	NCBI

RGD Object Information
RGD ID:	1705152
Created:	2008-01-12
Species:	Homo sapiens
Last Modified:	2013-06-10
Status:	ACTIVE