SHGC-79051 Marker Search Result - Rat Genome Database

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Marker: SHGC-79051

Symbol: SHGC-79051
Previously known as:
RGD ID: 1703868
Expected Size: 290 (bp)
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37X107,380,010 - 107,380,299UniSTSGRCh37
Build 36X107,266,666 - 107,266,955RGDNCBI36
CeleraX107,851,483 - 107,851,772RGD
Cytogenetic MapXq22.1-q22.3UniSTS
HuRefX97,002,539 - 97,002,828UniSTS
TNG Radiation Hybrid MapX24064.0UniSTS
Is Marker For: Genes:   ATG4A  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer AGTCACAATTTGGGAAGATGGAA
Reverse Primer GAGAGCAGATGCATGGGTAACTT
 

Region

Nucleotide Sequences
GenBank Nucleotide AL031177 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003470 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003518 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471120 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000274 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000484 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000513 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000685 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001631.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CT009680 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486224 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS990862 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  G49901 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000169 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL314078.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL583225 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH976428.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 115201 UniSTS
UniSTS SHGC-79051 UniSTS SSLP Pipeline