SHGC-58491 Marker Search Result - Rat Genome Database

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Keyword

General

Marker: SHGC-58491

Symbol:

SHGC-58491

Also known as:

Expected Size:

90 (bp)

Position

Map	Chr	Position	Source
Human TNG Radiation Hybrid Map	6	81478.0	UniSTS
Human Genome Assembly HuRef	6	134,442,833 - 134,442,922	UniSTS
Human Genome Assembly GRCh37	6	136,878,514 - 136,878,603	UniSTS
Human Celera Assembly	6	137,618,999 - 137,619,088	RGD
Human Genome Assembly Build 36	6	136,920,207 - 136,920,296	RGD
Human Cytogenetic Map	6	q22.33	UniSTS

Is Marker For:

Genes: MAP3K5

Model

Launch Genome Browser (GBrowse) : build 36 (hg18) , build 37 (hg19)

Annotation

References - curated

Strains and Sequence

Sequence

Region

Genes in Region (Human Genome Assembly GRCh37)

Nucleotide Sequences

QTLs in Region (Human Genome Assembly GRCh37)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1298490	OSTEAR22_H	Osteoarthritis QTL 22 (human)	2.9		Joint/bone inflammation	hip osteoarthritis	6	39259604	140014781	Human
2289234	BW142_H	Body weight QTL 142 (human)	3.13	.00007	Body weight	BMI	6	90928586	153814466	Human
1559214	SCL64_H	Serum cholesterol level QTL 64 (human)	3.1		Lipid level	HDL cholesterol and triglyceride	6	107951900	166709371	Human
1559238	SCL63_H	Serum cholesterol level QTL 63 (human)	2.4		Lipid level	HDL cholesterol	6	107951900	166709371	Human
1559235	SCL62_H	Serum cholesterol level QTL 62 (human)	2.9		Lipid level	HDL cholesterol	6	107951900	166709371	Human
1559227	SCL82_H	Serum cholesterol level QTL 82 (human)	3.7		Lipid level	HDL cholesterol subfraction 3	6	110938654	155245885	Human
1298407	BFD4_H	Body fluid distribution QTL 4 (human)	2.52		Body fluid distribution	impedance ratio	6	112879106	137302430	Human
1558692	SCL14_H	Serum cholesterol level QTL 14 (human)	2.7		Lipid level	HDL cholesterol	6	112879106	161725516	Human
2316881	GLUCO297_H	Glucose level QTL 297 (human)		.001	Glucose level		6	117985885	143985885	Human
2316891	GLUCO298_H	Glucose level QTL 298 (human)		.013	Glucose level		6	117985885	143985885	Human
2289461	BW222_H	Body morphometry QTL 222 (human)	1.55		Body morphometry	waist circumference	6	118730754	144730754	Human
2289470	SLEP15_H	Serum leptin level QTL 15 (human)	3.83		Hormone level	leptin	6	118730754	144730754	Human
2315780	GLUCO154_H	Glucose level QTL 154 (human)	1.97	.0013	Glucose level		6	118730754	144730754	Human
1643562	GLUCO22_H	Glucose level QTL 22 (human)		.003	Glucose level	non-insulin-dependent	6	124302311	150302311	Human
2316883	GLUCO296_H	Glucose level QTL 296 (human)		.003	Glucose level		6	124302311	150302311	Human
2316660	GLUCO254_H	Glucose level QTL 254 (human)	3.45	.017	Glucose level		6	126053814	152053814	Human
1558695	BW149_H	Body weight QTL 149 (human)	3.9	.0072	Body weight	BMI	6	130985753	143618869	Human
1559348	LDLPS1_H	Low density lipoprotein particle size QTL 1 (human)	2.1	.025	LDL particle size		6	130985753	156880311	Human

Additional Information

External Database Links

More on SHGC-58491
	Genome Browser:	(hg18) (hg19)
	Ensembl
	NCBI

RGD Object Information
RGD ID:	1693586
Created:	2008-01-12
Species:	Homo sapiens
Last Modified:	2013-06-10
Status:	ACTIVE