SHGC-58249 Marker Search Result - Rat Genome Database

Help | FTP Download | Citing RGD | Contact Us

Keyword

General

Marker: SHGC-58249

Symbol:

SHGC-58249

Also known as:

Expected Size:

115 (bp)

Position

Map	Chr	Position	Source
Human Genome Assembly HuRef	1	154,992,352 - 154,992,466	UniSTS
Human Genome Assembly GRCh37	1	183,756,642 - 183,756,756	UniSTS
Human Celera Assembly	1	156,867,678 - 156,867,792	RGD
Human Genome Assembly Build 36	1	182,023,265 - 182,023,379	RGD
Human Cytogenetic Map	1	q25.3	UniSTS

Is Marker For:

Genes: RGL1

Model

Launch Genome Browser (GBrowse) : build 36 (hg18) , build 37 (hg19)

Annotation

References - curated

Strains and Sequence

Sequence

Region

Genes in Region (Human Genome Assembly GRCh37)

Nucleotide Sequences

QTLs in Region (Human Genome Assembly GRCh37)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1581540	BP60_H	Blood pressure QTL 60 (human)			Blood pressure	hypertension susceptibility	1	19957148	198620398	Human
2301159	PRSTS386_H	Prostate tumor susceptibility QTL 386 (human)	1.55		Prostate tumor susceptibility		1	161261203	187261203	Human
2301164	PRSTS387_H	Prostate tumor susceptibility QTL 387 (human)	1.75		Prostate tumor susceptibility		15	161261203	187261203	Human
2316880	GLUCO300_H	Glucose level QTL 300 (human)		.001	Glucose level		1	161261203	187261203	Human
2293000	PRSTS117_H	Prostate tumor susceptibility QTL 117 (human)	2.75		Prostate tumor susceptibility		1	161503272	187503272	Human
2293407	PRSTS277_H	Prostate tumor susceptibility QTL 277 (human)			Prostate tumor susceptibility		1	161503272	187503272	Human
2315816	GLUCO177_H	Glucose level QTL 177 (human)	2.38		Glucose level		1	161503272	187503272	Human
1357296	AASTH9_H	Allergic/atopic asthma related QTL 9 (human)	1.17		Reversible airflow obstruction	ETS negative	1	162948826	244300505	Human
2299882	PRSTS312_H	Prostate tumor susceptibility QTL 312 (human)		.03	Prostate tumor susceptibility		1	165082659	191082659	Human
2301894	PRSTS418_H	Prostate tumor susceptibility QTL 418 (human)		.0000000331	Prostate tumor susceptibility		1	165082659	191082659	Human
2301830	PRSTS413_H	Prostate tumor susceptibility QTL 413 (human)		.000000338	Prostate tumor susceptibility		1	165082659	191082659	Human
2301831	PRSTS415_H	Prostate tumor susceptibility QTL 415 (human)		.0000467	Prostate tumor susceptibility		1	165082659	191082659	Human
2301832	PRSTS416_H	Prostate tumor susceptibility QTL 416 (human)		.001	Prostate tumor susceptibility		1	165082659	191082659	Human
2301833	PRSTS412_H	Prostate tumor susceptibility QTL 412 (human)		.00000859	Prostate tumor susceptibility		1	165082659	191082659	Human
2301834	PRSTS414_H	Prostate tumor susceptibility QTL 414 (human)		.000000922	Prostate tumor susceptibility		1	165082659	191082659	Human
2301820	PRSTS409_H	Prostate tumor susceptibility QTL 409 (human)		.001	Prostate tumor susceptibility		1	165082659	191082659	Human
2301821	PRSTS406_H	Prostate tumor susceptibility QTL 406 (human)		.0006	Prostate tumor susceptibility		1	165082659	191082659	Human
2301822	PRSTS411_H	Prostate tumor susceptibility QTL 411 (human)		.002	Prostate tumor susceptibility		1	165082659	191082659	Human
2301823	PRSTS408_H	Prostate tumor susceptibility QTL 408 (human)		.02	Prostate tumor susceptibility		1	165082659	191082659	Human
2301824	PRSTS407_H	Prostate tumor susceptibility QTL 407 (human)		.01	Prostate tumor susceptibility		1	165082659	191082659	Human
2301825	PRSTS405_H	Prostate tumor susceptibility QTL 405 (human)		.01	Prostate tumor susceptibility		1	165082659	191082659	Human
1576343	COARD4_H	Coronary artery disease susceptibility QTL 4 (human)	2.17	.006	Coronary artery disease susceptibility	early-onset	1	167509568	217093832	Human
1357385	BW60_H	Body weight QTL 60 (human)	2.2	.0006	Body weight	fat mass after exercise training	1	167954345	208452760	Human
2292775	PRSTS86_H	Prostate tumor susceptibility QTL 86 (human)	2.62		Prostate tumor susceptibility		1	169339102	195339102	Human
2301826	PRSTS410_H	Prostate tumor susceptibility QTL 410 (human)			Prostate tumor susceptibility		1	171141087	197141087	Human
1643541	GLUCO7_H	Glucose level QTL 7 (human)	2.6		Glucose level	non-insulin-dependent	1	171738521	197738521	Human
1581543	BP79_H	Blood pressure QTL 79 (human)	2.2	.001	Blood pressure	pulse pressure	1	173965439	199965439	Human
2289625	BW481_H	Body weight QTL 481 (human)	1.56		Body weight	BMI	1	174261102	187550496	Human
1643307	BW223_H	Body weight QTL 223 (human)	1.44		Body weight	body mass index	1	174550392	200550392	Human
2289485	BW250_H	Body weight QTL 250 (human)	2.36		Body morphometry	waist circumference	1	175146340	201146340	Human
2301835	PRSTS417_H	Prostate tumor susceptibility QTL 417 (human)		.001	Prostate tumor susceptibility		1	178082594	190199580	Human
2292936	PRSTS118_H	Prostate tumor susceptibility QTL 118 (human)	5.43		Prostate tumor susceptibility		1	178378961	204378961	Human

Additional Information

External Database Links

More on SHGC-58249
	Genome Browser:	(hg18) (hg19)
	Ensembl
	NCBI

RGD Object Information
RGD ID:	1658436
Created:	2008-01-12
Species:	Homo sapiens
Last Modified:	2013-06-10
Status:	ACTIVE