D2Chm280 Marker Search Result - Rat Genome Database

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Keyword

General

Marker: D2Chm280

Symbol:

D2Chm280

Also known as:

Expected Size:

221 (bp)

Position

Map	Chr	Position	Source
Rat Cytogenetic Map	2	q16	UniSTS
RGSC Genome Assembly v5.0	2	84,509,108 - 84,509,328	UniSTS
RGSC Genome Assembly v3.4	2	59,554,187 - 59,554,407	UniSTS
Rat Celera Assembly	2	59,489,085 - 59,489,305	UniSTS

Is Marker For:

Genes: Prlr

Model

Launch Genome Browser (GBrowse) for Chr2:59554187..59554407

Annotation

References - curated

Strains and Sequence

Sequence

Region

Genes in Region (RGSC Genome Assembly v3.4)

Nucleotide Sequences

QTLs in Region (RGSC Genome Assembly v3.4)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
631208	Bw1	Body weight QTL1	5.09		Body fat amount	mesenteric	2	42882523	84991985	Rat
1358887	Bw50	Body weight QTL 50	2.39		Body weight		2	24474676	163154227	Rat
1358908	Bw49	Body weight QTL 49	3.36		Body weight		2	24474676	163154227	Rat
70174	BpQTLCluster2	Blood pressure QTL cluster 2	2.86		Blood pressure		2	39828973	105443909	Rat
61355	Bp36	Blood pressure QTL 36	2.9		Blood pressure		2	3429900	105503269	Rat
2299162	Iddm32	Insulin dependent diabetes mellitus QTL 32	2.36		Glucose level	insulin-dependent	2	30109071	79796790	Rat
61371	Edpm1	Estrogen-dependent pituitary mass QTL 1	4	.66	Gland mass	pituitary	2	42866226	87866226	Rat
1331760	Bp206	Blood pressure QTL 206	3.62454		Blood pressure	time series calculation	2	56214854	210636169	Rat
631266	Bp132	Blood pressure QTL 132		.0005	Blood pressure	systolic	2	46542246	210636169	Rat
1300155	Bp174	Blood pressure QTL 174	4.09		Blood pressure	salt-loaded mean arterial	2	29321080	74321080	Rat
1354617	Bp240	Blood pressure QTL 240	4		Blood pressure	systolic	2	24496771	82826337	Rat
1354592	Rf50	Renal function QTL 50	3.5		Diuresis	urine volume (24-hr)	2	53661468	75806439	Rat
1354601	Slep1	Serum leptin concentration QTL 1	5.39		Hormone level	leptin	2	42882523	191378271	Rat
1354603	Bp243	Blood pressure QTL 243	3.9		Blood pressure	diastolic	2	1	131530924	Rat
1358899	Kidm23	Kidney mass QTL 23	3.88		Kidney mass		2	24474447	163154358	Rat
1358901	Cm38	Cardiac mass QTL 38	2		Cardiac mass		2	24474447	163154358	Rat
1357990	Ael1	Aortic elastin QTL 1	3.1	.00091	Protein level	aortic elastin	2	18905511	63905511	Rat
1358917	Cm42	Cardiac mass QTL 42	2.82		Cardiac mass		2	24474447	212169089	Rat
1358894	Kidm24	Kidney mass QTL 24	4.03		Kidney mass		2	24474447	163154358	Rat
1358904	Cm39	Cardiac mass QTL 39	2.26		Cardiac mass		2	24474447	163154358	Rat
1358910	Kidm27	Kidney mass QTL 27	5.77		Kidney mass		2	24474447	163154358	Rat
1358911	Kidm28	Kidney mass QTL 28	5.42		Kidney mass		2	24474447	163154358	Rat
1358913	Cm41	Cardiac mass QTL 41	2.73		Cardiac mass		2	24474447	212169089	Rat
1558648	Smcn1	Smooth muscle cell number QTL 1		.039	Smooth muscle cell number	aorta	2	59507966	131522430	Rat
731184	Mamtr4	Mammary tumor resistance QTL 4		.0003	Mammary tumor resistance		2	14747814	59747814	Rat
1578671	Bmd10	Bone mineral density QTL 10	5.4		Bone mineral density	femoral neck cortical vBMD	2	9670332	227150249	Rat
1582246	Cm60	Cardiac mass QTL 60	5.8		Cardiac mass		2	58117457	77630814	Rat
1579916	Bp270	Blood pressure QTL 270		.003	Blood pressure	mean arterial	2	56722060	59701221	Rat
2293676	Bmd19	Bone mineral density QTL 19	10.7	.0001	Bone mineral density		2	42874025	87874025	Rat
2300168	Bmd47	Bone mineral density QTL 47	6.6	.0001	Bone mineral density		2	20374107	65374107	Rat
2293671	Bss44	Bone structure and strength QTL 44	10.97	.0001	Bone structure		2	42874025	153832507	Rat
2293682	Bmd24	Bone mineral density QTL 24	8.9	.0001	Bone mineral density		2	42874025	87874025	Rat
2306903	Bp336	Blood pressure QTL 336		.01	Blood pressure	salt-loaded systolic	2	36432989	112326568	Rat
61467	Bp14	Blood pressure QTL 14	2.2		Blood pressure		2	42866342	210636008	Rat
1302794	Stl27	Serum triglyceride level QTL 27	4.4	.0001	Lipid level	triglyceride level	2	24474447	148790758	Rat
6480225	Gdil1	Gastrointestinal dilation QTL 1			Gastrointestinal dilation	megacolon	2	57161998	75806439	Rat

Additional Information

External Database Links

More on D2Chm280
	Genome Browser
	Ensembl
	NCBI

RGD Object Information
RGD ID:	1578947
Created:	2006-05-03
Species:	Rattus norvegicus
Last Modified:	2013-06-04
Status:	ACTIVE