D11S1888 Marker Search Result - Rat Genome Database

Symbol:

D11S1888

Previously known as:

AFMa134xe9; A134XE9; GDB:307892; W2828; HSA134XE9;

RGD ID:

1342266

Expected Size:

221 (bp)

Position

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	11	17,777,935 - 17,778,155	UniSTS	GRCh37
Build 36	11	17,734,511 - 17,734,731	RGD	NCBI36
Celera	11	17,910,458 - 17,910,676	RGD
Cytogenetic Map	11	p15	UniSTS
HuRef	11	17,461,928 - 17,462,148	UniSTS
Marshfield Genetic Map	11	21.47	RGD
Marshfield Genetic Map	11	21.47	UniSTS
Genethon Genetic Map	11	24.5	UniSTS
deCODE Assembly Map	11	27.2	UniSTS
Whitehead-YAC Contig Map	11		UniSTS

Is Marker For:

Genes: KCNC1

Annotation

References - curated

#	Reference Title	Reference Citation
1.	Comprehensive human genetic maps: individual and sex-specific variation in recombination.	Broman KW, etal., Am J Hum Genet 1998 Sep;63(3):861-9.
2.	UniSTS Pipeline	RGD automated pipelines

Strains and Sequence

Sequence

Region

Nucleotide Sequences


GenBank Nucleotide	AC004736	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC124056	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC124301	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH003458	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH003506	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH471064	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM000262	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM000472	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM000501	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM000673	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM001619.1	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DS486025	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DS990663	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GL000101	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GL296945.1	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GL583277	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JH976375.1	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	Z52228	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Additional Information

External Database Links

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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