DXS990 Marker Search Result - Rat Genome Database

Symbol:

DXS990

Previously known as:

AFM136yc7; 136YC7; GDB:593646; sWXD364; HS136YC7; GDB:188050; SHGC-249; stSG581;

RGD ID:

1336636

Expected Size:

159 (bp)

Position

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	X	93,000,646 - 93,000,819	UniSTS	GRCh37
GRCh37	X	93,000,657 - 93,000,817	UniSTS	GRCh37
Build 36	X	92,887,302 - 92,887,475	RGD	NCBI36
Celera	X	93,525,899 - 93,526,061	UniSTS
Celera	X	93,525,888 - 93,526,063	RGD
HuRef	X	82,823,341 - 82,823,503	UniSTS
HuRef	X	82,823,330 - 82,823,505	UniSTS
Marshfield Genetic Map	X	60.62	RGD
Genethon Genetic Map	X	104.9	UniSTS
TNG Radiation Hybrid Map	X	21162.0	UniSTS
deCODE Assembly Map	X	94.92	UniSTS
Stanford-G3 RH Map	X	3100.0	UniSTS
GeneMap99-GB4 RH Map	X	268.56	UniSTS
Whitehead-YAC Contig Map	X		UniSTS
GeneMap99-G3 RH Map	X	3000.0	UniSTS

Is Marker For:

Genes: ATP7A PHF8

Annotation

References - curated

#	Reference Title	Reference Citation
1.	Comprehensive human genetic maps: individual and sex-specific variation in recombination.	Broman KW, etal., Am J Hum Genet 1998 Sep;63(3):861-9.
2.	UniSTS Pipeline	RGD automated pipelines

Strains and Sequence

Sequence


Forward Primer	CTATATGACCAGTACAAACATACAC
Reverse Primer	CATCAACTCCTGATGTTTCTTTAATG

Region

Nucleotide Sequences


GenBank Nucleotide	CH003470	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH003518	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH471115	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM000274	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM000484	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM000513	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM000685	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM001631.1	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CT009680	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DS486111	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DS990749	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GL000169	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GL297670.1	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GL583051	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JH976428.1	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	Z16647	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	Z94722	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Additional Information

External Database Links

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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