DXWox26 Marker Search Result - Rat Genome Database

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Marker: DXWox26

Symbol: DXWox26
Previously known as: oxsts5799; PLP; 
RGD ID: 11122
Expected Size: 148 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2X100,203,334 - 100,203,482 (+)MAPPERmRatBN7.2
Rnor_6.0X107,513,655 - 107,513,802NCBIRnor6.0
Rnor_5.0X107,397,181 - 107,397,328UniSTSRnor5.0
RGSC_v3.4X124,505,946 - 124,506,093UniSTSRGSC3.4
CeleraX101,037,576 - 101,037,723UniSTS
Cytogenetic MapXq35UniSTS
Is Marker For: Genes:   Plp1  


Annotation


References - curated
# Reference Title Reference Citation
1. Data downloaded from Wellcome Trust, University of Oxford Data downloaded from Wellcome Trust, University of Oxford
2. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer AGAGGACAGTCAGCTCACTCC
Reverse Primer GCTGGGCCACTTGTAGTTGGT
 

Region

Nucleotide Sequences
GenBank Nucleotide JH620129.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
61430Cia18Collagen induced arthritis QTL 183.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)X14843113120568734Rat
1598837Memor13Memory QTL 133.2exploratory behavior trait (VT:0010471)difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)X41052407146860749Rat
738035Stresp1Stress response QTL 14.960.000011stress-related behavior trait (VT:0010451)defensive burying - copingX41304447112935181Rat
61431Cia19Collagen induced arthritis QTL 194.4joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)X65612192120568734Rat
724551Glom1Glomerulus QTL 12.80.0004kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)X75294106120294106Rat
1598872Memor14Memory QTL 144.5exploratory behavior trait (VT:0010471)difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)X93956491138956491Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene 24943 UniSTS
UniSTS 517828 UniSTS