Imported Disease Annotations - CTDTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | polycystic ovary syndrome | | ISO | FUT7 (Homo sapiens) | 11554173 | CTD Direct Evidence: marker/mechanism | CTD | PMID:21411543 | |
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Imported Disease Annotations - CTDTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | polycystic ovary syndrome | | ISO | FUT7 (Homo sapiens) | 11554173 | CTD Direct Evidence: marker/mechanism | CTD | PMID:21411543 | |
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# | Reference Title | Reference Citation |
1. | Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. | Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27. |
2. | Rat ISS GO annotations from MGI mouse gene data--August 2006 | MGD data from the GO Consortium |
3. | Cloning and expression of rat fucosyltransferase VII at sites of inflammation. | Niittymäki J, etal., APMIS. 2005 Sep;113(9):613-20. doi: 10.1111/j.1600-0463.2005.apm_279.x. |
4. | KEGG Annotation Import Pipeline | Pipeline to import KEGG annotations from KEGG into RGD |
5. | GOA pipeline | RGD automated data pipeline |
6. | Data Import for Chemical-Gene Interactions | RGD automated import pipeline for gene-chemical interactions |
7. | Expression of the alpha(1,3)fucosyltransferase Fuc-TVII in lymphoid aggregate high endothelial venules correlates with expression of L-selectin ligands. | Smith PL, etal., J Biol Chem 1996 Apr 5;271(14):8250-9. |
PMID:8207002 | PMID:8666674 | PMID:8752218 | PMID:9299472 | PMID:9405391 | PMID:9461592 | PMID:9473504 | PMID:10200296 | PMID:10386892 | PMID:10894166 | PMID:11278338 | PMID:11404359 |
PMID:11535629 | PMID:15843584 | PMID:15926890 | PMID:17229154 | PMID:18402946 | PMID:18553500 | PMID:18573908 | PMID:19946888 | PMID:23192350 | PMID:29138114 |
Fut7 (Rattus norvegicus - Norway rat) |
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FUT7 (Homo sapiens - human) |
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Fut7 (Mus musculus - house mouse) |
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Fut7 (Chinchilla lanigera - long-tailed chinchilla) |
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FUT7 (Pan paniscus - bonobo/pygmy chimpanzee) |
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FUT7 (Canis lupus familiaris - dog) |
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Fut7 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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FUT7 (Sus scrofa - pig) |
No map positions available. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
FUT7 (Chlorocebus sabaeus - green monkey) |
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Fut7 (Heterocephalus glaber - naked mole-rat) |
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Variants in Fut7
9 total Variants |
The detailed report is available here: | Full Report | CSV | TAB | Printer | ||||
miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/). For more information about miRGate, see PMID:25858286 or access the full paper here. |
The following QTLs overlap with this region. | Full Report | CSV | TAB | Printer | Gviewer |
UniSTS:224625 |
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alimentary part of gastrointestinal system | circulatory system | endocrine system | exocrine system | hemolymphoid system | hepatobiliary system | integumental system | musculoskeletal system | nervous system | renal system | reproductive system | respiratory system | appendage | |
High | |||||||||||||
Medium | |||||||||||||
Low | 2 | 1 | 34 | 26 | 19 | 26 | 22 | 15 | 11 | ||||
Below cutoff | 1 | 33 | 23 | 15 | 15 | 4 | 6 | 52 | 31 | 26 | 4 |
RefSeq Transcripts | NM_199491 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
XM_006233585 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_006233586 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_006233587 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_008761583 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_017591630 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_017591631 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_039104714 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_039104715 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
GenBank Nucleotide | AJ276068 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
CH474001 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
JAXUCZ010000003 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
RefSeq Acc Id: | ENSRNOT00000037169 ⟹ ENSRNOP00000033858 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | ENSRNOT00000081798 ⟹ ENSRNOP00000069960 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | NM_199491 ⟹ NP_955785 | ||||||||||||||||||||||||||||
RefSeq Status: | PROVISIONAL | ||||||||||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_006233585 ⟹ XP_006233647 | ||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_006233586 ⟹ XP_006233648 | ||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_006233587 ⟹ XP_006233649 | ||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_039104714 ⟹ XP_038960642 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | XM_039104715 ⟹ XP_038960643 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Protein RefSeqs | NP_955785 | (Get FASTA) | NCBI Sequence Viewer |
XP_006233647 | (Get FASTA) | NCBI Sequence Viewer | |
XP_006233648 | (Get FASTA) | NCBI Sequence Viewer | |
XP_006233649 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038960642 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038960643 | (Get FASTA) | NCBI Sequence Viewer | |
GenBank Protein | CAC81972 | (Get FASTA) | NCBI Sequence Viewer |
EDL93588 | (Get FASTA) | NCBI Sequence Viewer | |
Ensembl Protein | ENSRNOP00000033858 | ||
ENSRNOP00000033858.4 | |||
ENSRNOP00055000697 | |||
ENSRNOP00060033511 | |||
ENSRNOP00065035838 | |||
GenBank Protein | Q712G6 | (Get FASTA) | NCBI Sequence Viewer |
RefSeq Acc Id: | NP_955785 ⟸ NM_199491 |
- UniProtKB: | Q712G6 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_006233649 ⟸ XM_006233587 |
- Peptide Label: | isoform X5 |
- Sequence: |
RefSeq Acc Id: | XP_006233647 ⟸ XM_006233585 |
- Peptide Label: | isoform X1 |
- Sequence: |
RefSeq Acc Id: | XP_006233648 ⟸ XM_006233586 |
- Peptide Label: | isoform X2 |
- Sequence: |
RefSeq Acc Id: | ENSRNOP00000069960 ⟸ ENSRNOT00000081798 |
RefSeq Acc Id: | ENSRNOP00000033858 ⟸ ENSRNOT00000037169 |
RefSeq Acc Id: | XP_038960643 ⟸ XM_039104715 |
- Peptide Label: | isoform X4 |
RefSeq Acc Id: | XP_038960642 ⟸ XM_039104714 |
- Peptide Label: | isoform X3 |
- UniProtKB: | A6JT59 (UniProtKB/TrEMBL) |
Name | Modeler | Protein Id | AA Range | Protein Structure |
AF-Q712G6-F1-model_v2 | AlphaFold | Q712G6 | 1-370 | view protein structure |
eQTL | View at Phenogen | |
WGCNA | View at Phenogen | |
Tissue/Strain Expression | View at Phenogen |
Database | Acc Id | Source(s) |
AGR Gene | RGD:735019 | AgrOrtholog |
BioCyc Gene | G2FUF-50454 | BioCyc |
BioCyc Pathway | PWY-7831 [ABH and Lewis epitopes biosynthesis from type 2 precursor disaccharide] | BioCyc |
BioCyc Pathway Image | PWY-7831 | BioCyc |
Ensembl Genes | ENSRNOG00000014156 | Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot |
ENSRNOG00055000510 | UniProtKB/Swiss-Prot | |
ENSRNOG00060023400 | UniProtKB/Swiss-Prot | |
ENSRNOG00065025335 | UniProtKB/Swiss-Prot | |
Ensembl Transcript | ENSRNOT00000037169 | ENTREZGENE |
ENSRNOT00000037169.5 | UniProtKB/Swiss-Prot | |
ENSRNOT00055000883 | UniProtKB/Swiss-Prot | |
ENSRNOT00060040549 | UniProtKB/Swiss-Prot | |
ENSRNOT00065043659 | UniProtKB/Swiss-Prot | |
Gene3D-CATH | 3.40.50.11660 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
InterPro | Glyco_tran_10_N | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
Glyco_trans_10 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
GT10-like_C_sf | UniProtKB/TrEMBL, UniProtKB/Swiss-Prot | |
KEGG Report | rno:296564 | UniProtKB/Swiss-Prot |
NCBI Gene | 296564 | ENTREZGENE |
PANTHER | ALPHA- 1,3 -FUCOSYLTRANSFERASE | UniProtKB/TrEMBL |
ALPHA-(1,3)-FUCOSYLTRANSFERASE 7 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
PTHR11929 | UniProtKB/Swiss-Prot | |
Pfam | Glyco_tran_10_N | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
Glyco_transf_10 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
PhenoGen | Fut7 | PhenoGen |
RatGTEx | ENSRNOG00000014156 | RatGTEx |
ENSRNOG00055000510 | RatGTEx | |
ENSRNOG00060023400 | RatGTEx | |
ENSRNOG00065025335 | RatGTEx | |
Superfamily-SCOP | UDP-Glycosyltransferase/glycogen phosphorylase | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
UniProt | A6JT59 | ENTREZGENE, UniProtKB/TrEMBL |
FUT7_RAT | UniProtKB/Swiss-Prot, ENTREZGENE |
Date | Current Symbol | Current Name | Previous Symbol | Previous Name | Description | Reference | Status |
---|---|---|---|---|---|---|---|
2016-04-13 | Fut7 | fucosyltransferase 7 | Fut7 | fucosyltransferase 7 (alpha (1,3) fucosyltransferase) | Nomenclature updated to reflect human and mouse nomenclature | 1299863 | APPROVED |
2008-09-18 | Fut7 | fucosyltransferase 7 (alpha (1,3) fucosyltransferase) | Fut7 | fucosyltransferase 7 | Nomenclature updated to reflect human and mouse nomenclature | 1299863 | APPROVED |
2005-07-08 | Fut7 | fucosyltransferase 7 | fut7 | fucosyltransferase VII | Symbol and Name updated | 1299863 | APPROVED |