Gene: Sox11 (SRY box 11) Rattus norvegicus
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Symbol: Sox11
Name: SRY box 11
Description: ENCODES a protein that exhibits DNA binding transcription factor activity; RNA polymerase II transcription coactivator activity; transcription regulatory region sequence-specific DNA binding; INVOLVED IN cell proliferation; kidney development; negative regulation of transcription regulatory region DNA binding; ASSOCIATED WITH Carcinoma, Adenoid Cystic (ortholog); Mental Retardation, Autosomal Dominant 27 (ortholog); Neoplasm Invasiveness (ortholog); FOUND IN nucleus; cytoplasm (ortholog); INTERACTS WITH 6-propyl-2-thiouracil; alachlor; amitriptyline
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: SRY (sex determining region Y)-box 11; SRY-box 11; SRY-box containing gene 11; transcription factor SOX-11
Orthologs:
Homo sapiens (human) : SOX11 (SRY-box 11)  HGNC  AGR
Mus musculus (house mouse) : Sox11 (SRY (sex determining region Y)-box 11)  MGI  AGR
Chinchilla lanigera (long-tailed chinchilla) : Sox11 (SRY-box 11)
Pan paniscus (bonobo/pygmy chimpanzee) : SOX11 (SRY-box 11)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Sox11 (SRY-box 11)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0646,629,967 - 46,631,988 (-)NCBIRnor6.0rn6Rnor6.0
Rnor_5.0655,343,067 - 55,345,088 (-)NCBIRnor5.0rn5Rnor5.0
RGSC_v3.4645,141,366 - 45,143,387 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1645,144,498 - 45,146,513 (-)NCBI
Celera643,252,857 - 43,254,878 (-)NCBI
Cytogenetic Map6q16NCBImapview
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Sox11
AGR Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Map Viewer
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Vista + UCSC

RGD Object Information
RGD ID: 69351
Created: 2001-11-14
Species: Rattus norvegicus
Last Modified: 2017-10-31
Status: ACTIVE