Robo4 (roundabout guidance receptor 4) - Rat Genome Database

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Gene: Robo4 (roundabout guidance receptor 4) Rattus norvegicus
Analyze
Symbol: Robo4
Name: roundabout guidance receptor 4
RGD ID: 6494870
Description: Predicted to enable signaling receptor activity. Predicted to be involved in cell-cell adhesion and establishment of endothelial barrier. Predicted to act upstream of or within negative regulation of blood vessel endothelial cell migration. Predicted to be located in external side of plasma membrane. Biomarker of transient cerebral ischemia; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil; benzo[a]pyrene.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC100911068; Magic roundabout; Robo4l; roundabout homolog 4; roundabout homolog 4-like; roundabout, axon guidance receptor, homolog 4
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
NCBI Annotation Information: Note: GeneIDs: 100911068 and 300518 are annotated independently on Rnor_6.0 (Annotation Release 105) but may be redundant loci. [24 Feb 2015]
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8845,308,739 - 45,322,522 (+)NCBIGRCr8
mRatBN7.2837,119,953 - 37,133,887 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl837,119,988 - 37,132,519 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.0839,878,900 - 39,891,485 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl839,878,955 - 39,890,942 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0839,879,806 - 39,892,371 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Cytogenetic Map8q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Human placental expression of SLIT/ROBO signaling cues: effects of preeclampsia and hypoxia. Liao WX, etal., Biol Reprod. 2012 Apr 12;86(4):111. doi: 10.1095/biolreprod.110.088138. Print 2012 Apr.
3. Increased expression of Slit2 and its receptors Robo1 and Robo4 in reactive astrocytes of the rat hippocampus after transient forebrain ischemia. Park JH, etal., Brain Res. 2016 Mar 1;1634:45-56. doi: 10.1016/j.brainres.2015.12.056. Epub 2016 Jan 4.
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
5. Nine Genes Mediate the Therapeutic Effects of Iodine-131 Radiotherapy in Thyroid Carcinoma Patients. Shuwen H, etal., Dis Markers. 2020 Jun 16;2020:9369341. doi: 10.1155/2020/9369341. eCollection 2020.
Additional References at PubMed
PMID:12941633   PMID:15632090   PMID:15849270   PMID:22123939   PMID:23376485   PMID:23533145   PMID:27686659   PMID:30455415  


Genomics

Comparative Map Data
Robo4
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8845,308,739 - 45,322,522 (+)NCBIGRCr8
mRatBN7.2837,119,953 - 37,133,887 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl837,119,988 - 37,132,519 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.0839,878,900 - 39,891,485 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl839,878,955 - 39,890,942 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0839,879,806 - 39,892,371 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Cytogenetic Map8q22NCBI
ROBO4
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3811124,883,691 - 124,897,865 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl11124,883,691 - 124,898,500 (-)EnsemblGRCh38hg38GRCh38
GRCh3711124,753,587 - 124,767,761 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3611124,259,324 - 124,272,950 (-)NCBINCBI36Build 36hg18NCBI36
Build 3411124,259,324 - 124,272,951NCBI
Celera11121,914,289 - 121,928,006 (-)NCBICelera
Cytogenetic Map11q24.2NCBI
HuRef11120,696,466 - 120,710,183 (-)NCBIHuRef
CHM1_111124,640,224 - 124,653,941 (-)NCBICHM1_1
T2T-CHM13v2.011124,912,311 - 124,926,485 (-)NCBIT2T-CHM13v2.0
Robo4
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39937,313,198 - 37,325,319 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl937,313,193 - 37,326,411 (+)EnsemblGRCm39 Ensembl
GRCm38937,401,902 - 37,414,023 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl937,401,897 - 37,415,115 (+)EnsemblGRCm38mm10GRCm38
MGSCv37937,209,631 - 37,221,607 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36937,151,717 - 37,163,693 (+)NCBIMGSCv36mm8
Celera934,616,424 - 34,628,396 (+)NCBICelera
Cytogenetic Map9A4NCBI
cM Map920.76NCBI
Robo4
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541225,954,085 - 25,967,723 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541225,954,906 - 25,967,707 (-)NCBIChiLan1.0ChiLan1.0
ROBO4
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v29125,579,458 - 125,593,121 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan111126,684,362 - 126,697,997 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v011119,711,023 - 119,724,701 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.111123,626,063 - 123,639,793 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl11123,626,063 - 123,639,837 (-)Ensemblpanpan1.1panPan2
ROBO4
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.159,546,830 - 9,561,342 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl59,547,047 - 9,561,702 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha59,592,370 - 9,606,848 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.059,486,652 - 9,501,126 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl59,486,825 - 9,501,122 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.159,559,307 - 9,573,796 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.059,529,769 - 9,544,248 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.059,566,647 - 9,580,690 (+)NCBIUU_Cfam_GSD_1.0
Robo4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947107,074,254 - 107,089,138 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367431,318,718 - 1,336,689 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049367431,321,816 - 1,336,682 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ROBO4
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl952,083,760 - 52,097,736 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1952,083,757 - 52,097,784 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2957,599,263 - 57,613,277 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ROBO4
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11116,027,516 - 116,041,771 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1116,026,834 - 116,041,422 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604310,076,903 - 10,090,940 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Robo4
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624927888,141 - 903,659 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624927888,421 - 903,657 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Robo4
87 total Variants

QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
12880023Bw184Body weight QTL 1840.001body mass (VT:0001259)body weight (CMO:0000012)8209764047097640Rat
12880025Cm102Cardiac mass QTL 1020.044heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)8209764047097640Rat
12880028Cm103Cardiac mass QTL 1030.02heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)8209764047097640Rat
12880044Am9Aortic mass QTL 90.007aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)8209764047097640Rat
2317032Ginf2Gastrointestinal inflammation QTL 23.210.005liver integrity trait (VT:0010547)liver granuloma severity score (CMO:0002157)8470581049705810Rat
2317036Livw3Liver weight QTL 32.430.01liver mass (VT:0003402)liver weight to body weight ratio (CMO:0000633)8470581049705810Rat
2317048Ginf1Gastrointestinal inflammation QTL 13.520.005cecum mucosa thickness (VT:0010234)enterocolitis severity score (CMO:0002138)8470581049705810Rat
2301416Bp315Blood pressure QTL 3150.008arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)8767057852670578Rat
1354595Despr4Despair related QTL 42.160.0036locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)8768895552688955Rat
1354627Despr14Despair related QTL 140.0056locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)8768895552688955Rat
1581557Eae16Experimental allergic encephalomyelitis QTL 163.8nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)88462195110921472Rat
2317030Wbc5White blood cell count QTL 53.210.005leukocyte quantity (VT:0000217)white blood cell count (CMO:0000027)8873663553736635Rat
2317051Aia18Adjuvant induced arthritis QTL 182.42joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)8873663553736635Rat
1598824Memor4Memory QTL 42.5exploratory behavior trait (VT:0010471)total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)8971222053356647Rat
1357398Slep3Serum leptin concentration QTL 33.43blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)8971246341866876Rat
2302367Slep5Serum leptin concentration QTL 53.43blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)8971246341866876Rat
631650Stl6Serum triglyceride level QTL 640.0019blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)810378157112202585Rat
1558646Swd5Spike wave discharge measurement QTL 53.450.00036brain electrophysiology trait (VT:0010557)brain spike-and-wave discharge frequency (CMO:0001742)81490675159906751Rat
61373Mcs4Mammary carcinoma susceptibility QTL 41.1mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)81629044461290444Rat
631271Lecl1Lens clarity QTL 10.001lens clarity trait (VT:0001304)age of onset/diagnosis of cataract (CMO:0001584)81898416884531599Rat
731182Uae24Urinary albumin excretion QTL 246.4urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)81933115293965294Rat
631842Inf1Infertility severity QTL 14.10.001seminal gland mass (VT:0010524)seminal vesicle wet weight (CMO:0001603)82266233067662330Rat
2303564Gluco43Glucose level QTL 433blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)82613018771130187Rat
2303572Insul13Insulin level QTL 132blood insulin amount (VT:0001560)blood insulin level (CMO:0000349)82613018771130187Rat
1359021Bp271Blood pressure QTL 2711.8arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)82664491246711092Rat
631648Stl5Serum triglyceride level QTL 540.0003blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)82720571554998217Rat
1358892Kidm26Kidney mass QTL 263.69kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)82720571599103503Rat
1358896Bp262Blood pressure QTL 2622.89arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)82720571599103503Rat
1358907Cm40Cardiac mass QTL 401.89heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)82720571599103503Rat
1331804Cm30Cardiac mass QTL 303.77443heart mass (VT:0007028)heart wet weight (CMO:0000069)82824291253961020Rat
1300146Rf17Renal function QTL 172.9renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)82824291273242912Rat
8662823Vetf5Vascular elastic tissue fragility QTL 51.9artery integrity trait (VT:0010639)patent ductus arteriosus score (CMO:0002566)82824291299525068Rat
2302278Gluco36Glucose level QTL 364.2blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)82950266550095447Rat
724514Uae15Urinary albumin excretion QTL 152.9urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)82950266570386295Rat
1549908Neudeg1Neurodegradation QTL 15.50nervous system integrity trait (VT:0010566)logarithm of the ratio of the lesioned side motor neuron count to contralateral side motor neuron count (CMO:0001986)83018886794457446Rat
70206Alc20Alcohol consumption QTL 202drinking behavior trait (VT:0001422)ethanol intake volume to total fluid intake volume ratio (CMO:0001591)83084815440713225Rat
61337Bp22Blood pressure QTL 225.1arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)83084815442692818Rat
1331744Bp217Blood pressure QTL 2173.398arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)83084815458482492Rat
61353Bp35Blood pressure QTL 350.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)83084815461290444Rat
61353Bp35Blood pressure QTL 350.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)83084815461290444Rat
61353Bp35Blood pressure QTL 350.001arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)83084815461290444Rat
61353Bp35Blood pressure QTL 350.001arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)83084815461290444Rat
11556286Cm81Cardiac mass QTL 810.01heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)83084815461290444Rat
1359033Bp273Blood pressure QTL 273arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)83084815461290444Rat
2313046Bss78Bone structure and strength QTL 783.50.0001tibia strength trait (VT:1000284)tibia total energy absorbed before break (CMO:0001736)83084815482460899Rat
2313057Bss76Bone structure and strength QTL 7630.0001tibia size trait (VT:0100001)tibia midshaft cross-sectional area (CMO:0001717)83084815482460899Rat
2313067Bss77Bone structure and strength QTL 773.10.0001tibia size trait (VT:0100001)tibia midshaft endosteal cross-sectional area (CMO:0001716)83084815482460899Rat
2313088Bss75Bone structure and strength QTL 753.10.0001body length (VT:0001256)body length, nose to rump (CMO:0000079)83084815482460899Rat
1578755Pur5Proteinuria QTL 53.30.0001urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)830848154101699754Rat
1578765Klgr1Kidney lesion grade QTL 13.30.0001kidney morphology trait (VT:0002135)organ lesion measurement (CMO:0000677)830848154101699754Rat
1578769Uae31Urinary albumin excretion QTL 313.30.001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)830848154101699754Rat
2316950Scl66Serum cholesterol level QTL 664.1blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)830848259105647037Rat
1298065Scl16Serum cholesterol level QTL 163.8blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)83085640475856404Rat
1582222Epfw2Epididymal fat weight QTL 23.20.0005epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)83173772976737729Rat
61358Bp39Blood pressure QTL 392arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)83555193880551938Rat
61464Niddm11Non-insulin dependent diabetes mellitus QTL 113.10.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)83558203280582032Rat
1331838Niddm61Non-insulin dependent diabetes mellitus QTL 613.530.0004blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)83646953599083736Rat

Markers in Region
BF403256  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2837,132,229 - 37,132,444 (+)MAPPERmRatBN7.2
Rnor_6.0839,891,106 - 39,891,320NCBIRnor6.0
Rnor_5.0839,891,992 - 39,892,206UniSTSRnor5.0
RGSC_v3.4838,667,227 - 38,667,441UniSTSRGSC3.4
Celera837,320,458 - 37,320,672UniSTS
RH 3.4 Map8328.91UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium
Low 2 33 27 16 14 16 7 10 66 35 34 11 7
Below cutoff 1 10 30 25 5 25 1 1 8 7 1

Sequence


RefSeq Acc Id: ENSRNOT00000043344   ⟹   ENSRNOP00000044365
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl837,119,988 - 37,129,984 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000060300   ⟹   ENSRNOP00000057050
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl837,119,988 - 37,132,519 (+)Ensembl
Rnor_6.0 Ensembl839,878,955 - 39,890,942 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000105392   ⟹   ENSRNOP00000096743
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl837,120,063 - 37,132,519 (+)Ensembl
RefSeq Acc Id: NM_001305215   ⟹   NP_001292144
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8845,308,739 - 45,322,522 (+)NCBI
mRatBN7.2837,119,953 - 37,133,741 (+)NCBI
Rnor_6.0839,878,923 - 39,891,395 (+)NCBI
Sequence:
RefSeq Acc Id: XM_039080650   ⟹   XP_038936578
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8845,309,460 - 45,321,300 (+)NCBI
mRatBN7.2837,120,674 - 37,133,887 (+)NCBI
RefSeq Acc Id: XM_039080652   ⟹   XP_038936580
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8845,312,324 - 45,321,300 (+)NCBI
mRatBN7.2837,123,538 - 37,133,887 (+)NCBI
RefSeq Acc Id: XM_063264718   ⟹   XP_063120788
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8845,308,751 - 45,321,300 (+)NCBI
RefSeq Acc Id: NP_001292144   ⟸   NM_001305215
- Peptide Label: precursor
- UniProtKB: F1M7B9 (UniProtKB/TrEMBL),   F1LQR3 (UniProtKB/TrEMBL),   A6KRL3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000057050   ⟸   ENSRNOT00000060300
RefSeq Acc Id: XP_038936578   ⟸   XM_039080650
- Peptide Label: isoform X2
- UniProtKB: A0A8I6AR51 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038936580   ⟸   XM_039080652
- Peptide Label: isoform X3
RefSeq Acc Id: ENSRNOP00000096743   ⟸   ENSRNOT00000105392
RefSeq Acc Id: ENSRNOP00000044365   ⟸   ENSRNOT00000043344
RefSeq Acc Id: XP_063120788   ⟸   XM_063264718
- Peptide Label: isoform X1
Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q80W87-F1-model_v2 AlphaFold Q80W87 1-961 view protein structure
AF-F1M7B9-F1-model_v2 AlphaFold F1M7B9 1-1021 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:6494870 AgrOrtholog
BioCyc Gene G2FUF-31086 BioCyc
Ensembl Genes ENSRNOG00000049289 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSRNOG00000050964 Ensembl
Ensembl Transcript ENSRNOT00000043344.4 UniProtKB/TrEMBL
  ENSRNOT00000060300 ENTREZGENE
  ENSRNOT00000060300.5 UniProtKB/TrEMBL
  ENSRNOT00000105392.1 UniProtKB/TrEMBL
Gene3D-CATH 2.60.40.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Fibronectin_type3 UniProtKB/TrEMBL, UniProtKB/Swiss-Prot
  FN3_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig-like_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig-like_fold UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig_I-set UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig_sub UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig_sub2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report rno:100911068 UniProtKB/TrEMBL
NCBI Gene LOC100911068 ENTREZGENE
PANTHER PROTEIN SIDEKICK UniProtKB/Swiss-Prot
  PROTEIN SIDEKICK UniProtKB/Swiss-Prot
  PROTEIN SIDEKICK UniProtKB/TrEMBL
  PROTEIN SIDEKICK UniProtKB/TrEMBL
Pfam I-set UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig_3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Robo4 PhenoGen
PROSITE FN3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  IG_LIKE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
RatGTEx ENSRNOG00000049289 RatGTEx
  ENSRNOG00000050964 RatGTEx
SMART FN3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  IGc2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SM00409 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP FN_III-like UniProtKB/TrEMBL
  SSF48726 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF49265 UniProtKB/Swiss-Prot
UniProt A0A0G2QC46_RAT UniProtKB/TrEMBL
  A0A8I6AR51 ENTREZGENE, UniProtKB/TrEMBL
  A6KRL3 ENTREZGENE, UniProtKB/TrEMBL
  A6KRL4_RAT UniProtKB/TrEMBL
  F1LQR3 ENTREZGENE
  F1M7B9 ENTREZGENE, UniProtKB/TrEMBL
  Q80W87 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary F1LQR3 UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-11-04 Robo4  roundabout guidance receptor 4  LOC100911068  roundabout homolog 4-like  Name and Symbol changed 629549 APPROVED
2012-07-05 LOC100911068  roundabout homolog 4-like      Symbol and Name status set to provisional 70820 PROVISIONAL