Adgrl2 (adhesion G protein-coupled receptor L2) - Rat Genome Database

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Gene: Adgrl2 (adhesion G protein-coupled receptor L2) Rattus norvegicus
Analyze
Symbol: Adgrl2
Name: adhesion G protein-coupled receptor L2
RGD ID: 620835
Description: Enables PDZ domain binding activity. Predicted to be involved in adenylate cyclase-activating G protein-coupled receptor signaling pathway and synapse organization. Predicted to act upstream of or within positive regulation of synapse assembly and response to bacterium. Predicted to be located in membrane. Predicted to be active in glutamatergic synapse and postsynaptic membrane. Orthologous to human ADGRL2 (adhesion G protein-coupled receptor L2); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene; 3,4-methylenedioxymethamphetamine.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: calcium-independent alpha-latrotoxin receptor 2; calcium-independent alpha-latrotoxin receptor homolog 2; Cirl-2; Cirl2; Cl2ac; latrophilin 2; latrophilin-2; Lphn2
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82240,356,176 - 240,987,246 (-)NCBIGRCr8
mRatBN7.22237,696,055 - 238,327,141 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2237,696,056 - 238,327,141 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2245,499,238 - 246,122,062 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02243,400,201 - 244,019,122 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02238,256,960 - 238,879,799 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02258,792,838 - 258,997,145 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2258,792,839 - 258,997,145 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02277,462,664 - 277,666,602 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.02273,089,566 - 273,220,878 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42247,060,645 - 247,201,904 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.12247,075,258 - 247,216,511 (-)NCBI
Celera2229,647,140 - 230,280,349 (-)NCBICelera
Cytogenetic Map2q45NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,2-dichloroethane  (ISO)
17beta-estradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-diaminotoluene  (ISO)
2,4-dinitrotoluene  (EXP)
3,4-methylenedioxymethamphetamine  (EXP)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
3H-1,2-dithiole-3-thione  (EXP)
4,4'-diaminodiphenylmethane  (EXP)
4-hydroxyphenyl retinamide  (ISO)
5-fluorouracil  (ISO)
6-propyl-2-thiouracil  (EXP)
acetamide  (EXP)
acrylamide  (ISO)
aflatoxin B1  (ISO)
aristolochic acid A  (ISO)
arsenite(3-)  (ISO)
benzo[a]pyrene  (ISO)
benzo[b]fluoranthene  (ISO)
beta-naphthoflavone  (ISO)
bis(2-chloroethyl) sulfide  (EXP)
bisphenol A  (EXP,ISO)
butanal  (ISO)
cadmium dichloride  (EXP)
caffeine  (ISO)
calcium atom  (EXP)
calcium(0)  (EXP)
choline  (ISO)
chromium atom  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
Cuprizon  (EXP)
cyclosporin A  (ISO)
dexamethasone  (EXP,ISO)
dibutyl phthalate  (EXP,ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
endosulfan  (EXP)
epoxiconazole  (ISO)
ethanol  (EXP,ISO)
flusilazole  (ISO)
flutamide  (EXP)
folic acid  (ISO)
fonofos  (ISO)
FR900359  (ISO)
fulvestrant  (ISO)
furan  (EXP)
gentamycin  (EXP)
hexaconazole  (ISO)
indometacin  (ISO)
L-methionine  (ISO)
Licochalcone B  (ISO)
methapyrilene  (EXP)
methotrexate  (ISO)
nefazodone  (EXP)
nimesulide  (EXP)
nitrofen  (EXP)
oxaliplatin  (EXP)
ozone  (ISO)
paracetamol  (EXP,ISO)
parathion  (ISO)
pirinixic acid  (EXP,ISO)
potassium chromate  (ISO)
progesterone  (ISO)
quercetin  (ISO)
resveratrol  (ISO)
SB 431542  (ISO)
sunitinib  (ISO)
temozolomide  (ISO)
terbufos  (ISO)
tetrachloromethane  (EXP)
titanium dioxide  (EXP)
topotecan  (EXP)
triadimefon  (ISO)
triptonide  (ISO)
valproic acid  (ISO)
vinclozolin  (EXP)
vorinostat  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. A novel ubiquitously expressed alpha-latrotoxin receptor is a member of the CIRL family of G-protein-coupled receptors. Ichtchenko K, etal., J Biol Chem 1999 Feb 26;274(9):5491-8.
4. The calcium-independent receptor for alpha-latrotoxin from human and rodent brains interacts with members of the ProSAP/SSTRIP/Shank family of multidomain proteins. Kreienkamp HJ, etal., J Biol Chem. 2000 Oct 20;275(42):32387-90.
5. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
6. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
7. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
8. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
9. The G protein-coupled receptor CL1 interacts directly with proteins of the Shank family. Tobaben S, etal., J Biol Chem 2000 Nov 17;275(46):36204-10.
10. A de novo variant in ADGRL2 suggests a novel mechanism underlying the previously undescribed association of extreme microcephaly with severely reduced sulcation and rhombencephalosynapsis. Vezain M, etal., Acta Neuropathol Commun. 2018 Oct 19;6(1):109. doi: 10.1186/s40478-018-0610-5.
Additional References at PubMed
PMID:8889548   PMID:9830014   PMID:16641100   PMID:23012479   PMID:24613359   PMID:28972101  


Genomics

Comparative Map Data
Adgrl2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82240,356,176 - 240,987,246 (-)NCBIGRCr8
mRatBN7.22237,696,055 - 238,327,141 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2237,696,056 - 238,327,141 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2245,499,238 - 246,122,062 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02243,400,201 - 244,019,122 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02238,256,960 - 238,879,799 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02258,792,838 - 258,997,145 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2258,792,839 - 258,997,145 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02277,462,664 - 277,666,602 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.02273,089,566 - 273,220,878 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42247,060,645 - 247,201,904 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.12247,075,258 - 247,216,511 (-)NCBI
Celera2229,647,140 - 230,280,349 (-)NCBICelera
Cytogenetic Map2q45NCBI
ADGRL2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38181,306,132 - 81,993,932 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl181,306,147 - 81,993,932 (+)EnsemblGRCh38hg38GRCh38
GRCh37181,771,817 - 82,459,616 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36182,038,670 - 82,230,695 (+)NCBINCBI36Build 36hg18NCBI36
Build 34181,978,102 - 82,170,127NCBI
Celera180,498,753 - 80,690,763 (+)NCBICelera
Cytogenetic Map1p31.1NCBI
HuRef180,397,423 - 80,589,511 (+)NCBIHuRef
CHM1_1182,381,106 - 82,573,149 (+)NCBICHM1_1
T2T-CHM13v2.0181,143,677 - 81,831,513 (+)NCBIT2T-CHM13v2.0
Adgrl2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm393148,521,491 - 149,150,832 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl3148,521,219 - 148,696,191 (-)EnsemblGRCm39 Ensembl
GRCm383148,815,586 - 148,989,096 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl3148,815,583 - 148,990,555 (-)EnsemblGRCm38mm10GRCm38
MGSCv373148,478,550 - 148,617,599 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv363148,752,972 - 148,926,949 (-)NCBIMGSCv36mm8
Celera3155,281,713 - 155,421,190 (-)NCBICelera
Cytogenetic Map3H3NCBI
cM Map374.1NCBI
Adgrl2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542311,787,435 - 12,009,476 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495542311,789,313 - 12,062,478 (-)NCBIChiLan1.0ChiLan1.0
ADGRL2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21144,920,285 - 145,602,202 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11144,079,675 - 144,761,818 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0180,506,240 - 81,189,353 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1183,124,539 - 83,317,455 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl183,086,465 - 83,317,446 (+)Ensemblpanpan1.1panPan2
ADGRL2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1665,596,814 - 66,216,074 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl665,596,814 - 65,750,672 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha668,252,289 - 68,871,538 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0666,140,076 - 66,756,017 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl666,140,076 - 66,755,754 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1665,674,790 - 66,294,622 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0665,628,555 - 66,248,490 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0666,134,596 - 66,754,463 (-)NCBIUU_Cfam_GSD_1.0
Adgrl2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505892,221,213 - 92,841,150 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366083,463,806 - 3,678,560 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366083,465,889 - 3,678,575 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ADGRL2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl6131,727,084 - 132,113,933 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.16131,727,082 - 132,366,106 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.26121,953,589 - 122,144,924 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ADGRL2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12051,300,132 - 51,535,947 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2051,305,336 - 51,496,007 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603365,631,412 - 66,426,433 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Adgrl2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474215,590,485 - 15,745,707 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474215,590,828 - 16,129,074 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Adgrl2
5874 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:920
Count of miRNA genes:239
Interacting mature miRNAs:286
Transcripts:ENSRNOT00000040566, ENSRNOT00000042256, ENSRNOT00000045020, ENSRNOT00000045905
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
724534Uae6Urinary albumin excretion QTL 610urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)278665619249053267Rat
1641891Alcrsp17Alcohol response QTL 17response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)2149559561249053267Rat
2317752Glom23Glomerulus QTL 233.6urine protein amount (VT:0005160)urine protein level (CMO:0000591)2193452645245889826Rat
1598835Anxrr18Anxiety related response QTL 182.98body movement coordination trait (VT:0005424)number of rearing movements in an experimental apparatus (CMO:0001752)2200990457245990457Rat
2298479Eau5Experimental allergic uveoretinitis QTL 50.0021uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)2202446871237938339Rat
7207490Bss111Bone structure and strength QTL 1116.4femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)2211744537249053267Rat
7207482Bss107Bone structure and strength QTL 1077femur strength trait (VT:0010010)femur ultimate force (CMO:0001675)2211744537249053267Rat
7207484Bss108Bone structure and strength QTL 1085.3femur strength trait (VT:0010010)femur total energy absorbed before break (CMO:0001677)2211744537249053267Rat
1298075Scl17Serum cholesterol level QTL 173.4blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)2211744537249053267Rat
1549836Bss2Bone structure and strength QTL 27.5femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)2211744537249053267Rat
2317885Alcrsp28Alcohol response QTL 282.10.63response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)2212828222249053267Rat
1300126Bp175Blood pressure QTL 1753.46arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)2214226044247136170Rat
2313073Bmd75Bone mineral density QTL 754.10.0001tibia mineral mass (VT:1000283)total volumetric bone mineral density (CMO:0001728)2215377404237938339Rat
1331767Hrtrt12Heart rate QTL 123.373heart pumping trait (VT:2000009)heart rate (CMO:0000002)2218414747240841241Rat
2293833Kiddil8Kidney dilation QTL 82.9kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)2219753301247136170Rat
2293844Kiddil7Kidney dilation QTL 73.5kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)2219753301247136170Rat
9587428Epfw6Epididymal fat weight QTL 67.470.001epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)2223389739249053267Rat
7411555Bw132Body weight QTL 1320.001body mass (VT:0001259)body weight gain (CMO:0000420)2223389739249053267Rat
631563Hcuc3Hepatic copper content QTL 33.87liver copper amount (VT:0003065)liver copper weight to liver dry weight ratio (CMO:0001512)2229059610249053267Rat

Markers in Region
D2Mgh22  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.22237,938,229 - 237,938,339 (+)MAPPERmRatBN7.2
Rnor_6.02254,132,315 - 254,132,424NCBIRnor6.0
Rnor_5.02272,824,538 - 272,824,647UniSTSRnor5.0
RGSC_v3.42247,305,963 - 247,306,073RGDRGSC3.4
RGSC_v3.42247,305,964 - 247,306,073UniSTSRGSC3.4
RGSC_v3.12247,320,570 - 247,320,680RGD
Celera2229,889,633 - 229,889,742UniSTS
Cytogenetic Map2q45UniSTS
D2Rat69  
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_6.02254,121,593 - 254,121,739NCBIRnor6.0
Rnor_5.02272,813,816 - 272,813,962UniSTSRnor5.0
RGSC_v3.42247,295,669 - 247,295,816RGDRGSC3.4
RGSC_v3.42247,295,670 - 247,295,816UniSTSRGSC3.4
RGSC_v3.12247,310,276 - 247,310,423RGD
Celera2229,879,373 - 229,879,519UniSTS
RH 2.0 Map21076.7RGD
SHRSP x BN Map2106.7499RGD
Cytogenetic Map2q45UniSTS
D2Got169  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.22238,147,620 - 238,147,754 (+)MAPPERmRatBN7.2
Rnor_6.02254,350,865 - 254,350,998NCBIRnor6.0
Rnor_5.02273,041,480 - 273,041,613UniSTSRnor5.0
RGSC_v3.42247,529,189 - 247,529,323RGDRGSC3.4
RGSC_v3.42247,529,190 - 247,529,323UniSTSRGSC3.4
RGSC_v3.12247,543,797 - 247,543,930RGD
Celera2230,097,868 - 230,098,009UniSTS
RH 3.4 Map21464.4RGD
RH 3.4 Map21464.4UniSTS
Cytogenetic Map2q45UniSTS
D2Got172  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.22237,787,974 - 237,788,154 (+)MAPPERmRatBN7.2
Rnor_6.02258,884,921 - 258,885,100NCBIRnor6.0
Rnor_5.02277,554,747 - 277,554,926UniSTSRnor5.0
RGSC_v3.42247,152,328 - 247,152,507RGDRGSC3.4
RGSC_v3.42247,152,329 - 247,152,508UniSTSRGSC3.4
RGSC_v3.12247,166,935 - 247,167,114RGD
Celera2229,739,045 - 229,739,224UniSTS
Cytogenetic Map2q45UniSTS
D2Got173  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.22237,776,484 - 237,776,622 (+)MAPPERmRatBN7.2
Rnor_6.02258,873,269 - 258,873,406NCBIRnor6.0
Rnor_5.02277,543,095 - 277,543,232UniSTSRnor5.0
RGSC_v3.42247,140,842 - 247,140,980RGDRGSC3.4
RGSC_v3.42247,140,843 - 247,140,980UniSTSRGSC3.4
RGSC_v3.12247,155,449 - 247,155,587RGD
Celera2229,727,559 - 229,727,696UniSTS
Cytogenetic Map2q45UniSTS
D2Got175  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.22237,972,097 - 237,972,190 (+)MAPPERmRatBN7.2
Rnor_6.02254,164,316 - 254,164,408NCBIRnor6.0
Rnor_5.02272,856,539 - 272,856,631UniSTSRnor5.0
RGSC_v3.42247,339,292 - 247,339,385RGDRGSC3.4
RGSC_v3.42247,339,293 - 247,339,385UniSTSRGSC3.4
RGSC_v3.12247,353,899 - 247,353,992RGD
Celera2229,923,112 - 229,923,204UniSTS
Cytogenetic Map2q45UniSTS
AU049049  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.22238,215,116 - 238,215,264 (+)MAPPERmRatBN7.2
Rnor_6.02254,418,270 - 254,418,423NCBIRnor6.0
Rnor_5.02273,108,885 - 273,109,038UniSTSRnor5.0
RGSC_v3.42247,596,694 - 247,596,841UniSTSRGSC3.4
Celera2230,165,108 - 230,165,253UniSTS
Cytogenetic Map2q45UniSTS
RH127891  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.22237,890,162 - 237,890,382 (+)MAPPERmRatBN7.2
Rnor_6.02258,987,023 - 258,987,242NCBIRnor6.0
Rnor_5.02277,656,480 - 277,656,699UniSTSRnor5.0
RGSC_v3.42247,257,742 - 247,257,961UniSTSRGSC3.4
Celera2229,841,572 - 229,841,791UniSTS
Cytogenetic Map2q45UniSTS
BF386408  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.22237,938,812 - 237,939,029 (+)MAPPERmRatBN7.2
Rnor_6.02254,132,898 - 254,133,114NCBIRnor6.0
Rnor_5.02272,825,121 - 272,825,337UniSTSRnor5.0
RGSC_v3.42247,306,547 - 247,306,763UniSTSRGSC3.4
Celera2229,890,216 - 229,890,432UniSTS
Cytogenetic Map2q45UniSTS
RH138530  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.22237,728,291 - 237,728,452 (+)MAPPERmRatBN7.2
Rnor_6.02258,825,074 - 258,825,234NCBIRnor6.0
Rnor_5.02277,494,900 - 277,495,060UniSTSRnor5.0
RGSC_v3.42247,092,648 - 247,092,808UniSTSRGSC3.4
Celera2229,679,364 - 229,679,524UniSTS
Cytogenetic Map2q45UniSTS
MARC_13861-13862:1007063395:1  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.22237,696,303 - 237,696,686 (+)MAPPERmRatBN7.2
Rnor_6.02258,793,087 - 258,793,469NCBIRnor6.0
Rnor_5.02277,462,913 - 277,463,295UniSTSRnor5.0
RGSC_v3.42247,060,658 - 247,061,040UniSTSRGSC3.4
Celera2229,647,389 - 229,647,771UniSTS
Cytogenetic Map2q45UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 1 41 47 39 2 39 1 1 74 35 34 11 1
Low 2 2 10 2 17 2 7 10 7 7
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001190475 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001302208 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001302209 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001302210 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001302211 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001302212 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_134408 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039101632 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039101637 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039101639 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039101645 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039101650 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281222 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281223 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281224 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281225 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281226 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281227 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281228 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281229 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281230 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281231 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281232 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281233 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281234 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281235 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281236 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281237 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281238 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281239 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281240 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281243 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281244 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281245 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281246 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281247 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281248 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281249 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281250 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281251 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281252 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281253 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281254 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281255 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281256 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281257 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281258 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281259 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281260 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281261 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281262 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281263 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281264 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281265 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281266 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281267 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281268 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AA899882 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF063102 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF081148 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF081149 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF081150 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF081151 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF081152 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF081153 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CB579130 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CB608997 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH473952 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CO556290 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FM039554 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FM068641 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FM099106 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000002 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSRNOT00000042256   ⟹   ENSRNOP00000043979
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl2258,792,839 - 258,997,145 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000045020   ⟹   ENSRNOP00000041829
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl2258,794,098 - 258,997,138 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000045905   ⟹   ENSRNOP00000042136
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl2237,696,056 - 237,835,177 (-)Ensembl
Rnor_6.0 Ensembl2258,792,839 - 258,932,200 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000095458   ⟹   ENSRNOP00000081656
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl2237,698,889 - 238,327,141 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000095993   ⟹   ENSRNOP00000095749
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl2237,696,056 - 238,327,141 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000096110   ⟹   ENSRNOP00000085342
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl2237,696,056 - 238,327,141 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000099353   ⟹   ENSRNOP00000083919
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl2237,698,138 - 238,327,141 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000105330   ⟹   ENSRNOP00000085707
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl2237,696,056 - 238,327,141 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000107980   ⟹   ENSRNOP00000092213
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl2237,696,056 - 238,327,141 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000109156   ⟹   ENSRNOP00000083029
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl2237,696,056 - 238,327,141 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000110831   ⟹   ENSRNOP00000077192
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl2237,696,056 - 238,327,141 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000111340   ⟹   ENSRNOP00000090257
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl2237,696,056 - 238,327,141 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000112743   ⟹   ENSRNOP00000095428
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl2237,696,056 - 238,327,141 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000115240   ⟹   ENSRNOP00000086180
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl2237,696,056 - 238,327,141 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000115673   ⟹   ENSRNOP00000081092
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl2237,698,138 - 238,327,141 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000116263   ⟹   ENSRNOP00000089949
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl2237,698,889 - 238,327,141 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000117907   ⟹   ENSRNOP00000081097
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl2237,696,056 - 238,327,141 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000119633   ⟹   ENSRNOP00000097806
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl2237,696,056 - 238,327,141 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000120239   ⟹   ENSRNOP00000084635
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl2237,696,056 - 238,327,141 (-)Ensembl
RefSeq Acc Id: NM_001190475   ⟹   NP_001177404
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82240,356,176 - 240,987,226 (-)NCBI
mRatBN7.22237,696,055 - 238,327,141 (-)NCBI
Rnor_6.02258,792,838 - 258,997,145 (-)NCBI
Rnor_5.02273,089,566 - 273,220,878 (-)NCBI
Rnor_5.02277,462,664 - 277,666,602 (-)NCBI
Celera2229,647,140 - 230,280,349 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001302208   ⟹   NP_001289137
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82240,356,176 - 240,987,226 (-)NCBI
mRatBN7.22237,696,055 - 238,327,141 (-)NCBI
Rnor_6.02258,792,838 - 258,997,145 (-)NCBI
Celera2229,647,140 - 230,280,349 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001302209   ⟹   NP_001289138
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82240,356,176 - 240,987,226 (-)NCBI
mRatBN7.22237,696,055 - 238,327,141 (-)NCBI
Rnor_6.02258,792,838 - 258,997,145 (-)NCBI
Celera2229,647,140 - 230,280,349 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001302210   ⟹   NP_001289139
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82240,356,176 - 240,987,226 (-)NCBI
mRatBN7.22237,696,055 - 238,327,141 (-)NCBI
Rnor_6.02258,792,838 - 258,997,145 (-)NCBI
Celera2229,647,140 - 230,280,349 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001302211   ⟹   NP_001289140
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82240,356,176 - 240,987,226 (-)NCBI
mRatBN7.22237,696,055 - 238,327,141 (-)NCBI
Rnor_6.02258,792,838 - 258,997,145 (-)NCBI
Celera2229,647,140 - 230,280,349 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001302212   ⟹   NP_001289141
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82240,356,176 - 240,987,226 (-)NCBI
mRatBN7.22237,696,055 - 238,327,141 (-)NCBI
Rnor_6.02258,792,838 - 258,997,145 (-)NCBI
Celera2229,647,140 - 230,280,349 (-)NCBI
Sequence:
RefSeq Acc Id: NM_134408   ⟹   NP_599235
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82240,356,176 - 240,495,299 (-)NCBI
mRatBN7.22237,696,055 - 237,835,177 (-)NCBI
Rnor_6.02258,792,838 - 258,932,123 (-)NCBI
Rnor_5.02277,462,664 - 277,666,602 (-)NCBI
RGSC_v3.42247,060,645 - 247,201,904 (-)RGD
Celera2229,647,140 - 229,787,126 (-)NCBI
Sequence:
RefSeq Acc Id: XM_039101632   ⟹   XP_038957560
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82240,356,176 - 240,529,122 (-)NCBI
mRatBN7.22237,696,055 - 237,869,801 (-)NCBI
RefSeq Acc Id: XM_039101637   ⟹   XP_038957565
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82240,356,176 - 240,529,122 (-)NCBI
mRatBN7.22237,697,395 - 237,869,801 (-)NCBI
RefSeq Acc Id: XM_039101639   ⟹   XP_038957567
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82240,356,176 - 240,529,122 (-)NCBI
mRatBN7.22237,696,055 - 237,869,801 (-)NCBI
RefSeq Acc Id: XM_039101645   ⟹   XP_038957573
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82240,356,176 - 240,529,122 (-)NCBI
mRatBN7.22237,697,395 - 237,869,800 (-)NCBI
RefSeq Acc Id: XM_039101650   ⟹   XP_038957578
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82240,356,176 - 240,529,122 (-)NCBI
mRatBN7.22237,697,395 - 237,869,800 (-)NCBI
RefSeq Acc Id: XM_063281222   ⟹   XP_063137292
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82240,356,176 - 240,529,122 (-)NCBI
RefSeq Acc Id: XM_063281223   ⟹   XP_063137293
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82240,356,176 - 240,987,246 (-)NCBI
RefSeq Acc Id: XM_063281224   ⟹   XP_063137294
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82240,356,176 - 240,530,385 (-)NCBI
RefSeq Acc Id: XM_063281225   ⟹   XP_063137295
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82240,356,176 - 240,530,944 (-)NCBI
RefSeq Acc Id: XM_063281226   ⟹   XP_063137296
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82240,356,176 - 240,529,122 (-)NCBI
RefSeq Acc Id: XM_063281227   ⟹   XP_063137297
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82240,356,176 - 240,529,122 (-)NCBI
RefSeq Acc Id: XM_063281228   ⟹   XP_063137298
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82240,356,176 - 240,529,122 (-)NCBI
RefSeq Acc Id: XM_063281229   ⟹   XP_063137299
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82240,356,176 - 240,529,122 (-)NCBI
RefSeq Acc Id: XM_063281230   ⟹   XP_063137300
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82240,356,176 - 240,529,122 (-)NCBI
RefSeq Acc Id: XM_063281231   ⟹   XP_063137301
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82240,356,176 - 240,530,959 (-)NCBI
RefSeq Acc Id: XM_063281232   ⟹   XP_063137302
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82240,356,176 - 240,529,122 (-)NCBI
RefSeq Acc Id: XM_063281233   ⟹   XP_063137303
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82240,356,176 - 240,529,122 (-)NCBI
RefSeq Acc Id: XM_063281234   ⟹   XP_063137304
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82240,356,176 - 240,530,959 (-)NCBI
RefSeq Acc Id: XM_063281235   ⟹   XP_063137305
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82240,356,176 - 240,529,122 (-)NCBI
RefSeq Acc Id: XM_063281236   ⟹   XP_063137306
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82240,356,176 - 240,529,122 (-)NCBI
RefSeq Acc Id: XM_063281237   ⟹   XP_063137307
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82240,356,176 - 240,529,122 (-)NCBI
RefSeq Acc Id: XM_063281238   ⟹   XP_063137308
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82240,356,176 - 240,529,122 (-)NCBI
RefSeq Acc Id: XM_063281239   ⟹   XP_063137309
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82240,356,176 - 240,530,392 (-)NCBI
RefSeq Acc Id: XM_063281240   ⟹   XP_063137310
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82240,356,176 - 240,529,122 (-)NCBI
RefSeq Acc Id: XM_063281243   ⟹   XP_063137313
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82240,356,176 - 240,529,122 (-)NCBI
RefSeq Acc Id: XM_063281244   ⟹   XP_063137314
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82240,356,176 - 240,529,122 (-)NCBI
RefSeq Acc Id: XM_063281245   ⟹   XP_063137315
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82240,356,176 - 240,530,392 (-)NCBI
RefSeq Acc Id: XM_063281246   ⟹   XP_063137316
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82240,356,176 - 240,530,959 (-)NCBI
RefSeq Acc Id: XM_063281247   ⟹   XP_063137317
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82240,356,176 - 240,529,122 (-)NCBI
RefSeq Acc Id: XM_063281248   ⟹   XP_063137318
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82240,356,176 - 240,529,122 (-)NCBI
RefSeq Acc Id: XM_063281249   ⟹   XP_063137319
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82240,356,176 - 240,529,122 (-)NCBI
RefSeq Acc Id: XM_063281250   ⟹   XP_063137320
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82240,356,176 - 240,529,122 (-)NCBI
RefSeq Acc Id: XM_063281251   ⟹   XP_063137321
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82240,356,176 - 240,529,122 (-)NCBI
RefSeq Acc Id: XM_063281252   ⟹   XP_063137322
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82240,356,176 - 240,529,122 (-)NCBI
RefSeq Acc Id: XM_063281253   ⟹   XP_063137323
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82240,356,176 - 240,529,122 (-)NCBI
RefSeq Acc Id: XM_063281254   ⟹   XP_063137324
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82240,356,176 - 240,529,122 (-)NCBI
RefSeq Acc Id: XM_063281255   ⟹   XP_063137325
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82240,356,176 - 240,529,122 (-)NCBI
RefSeq Acc Id: XM_063281256   ⟹   XP_063137326
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82240,358,149 - 240,529,122 (-)NCBI
RefSeq Acc Id: XM_063281257   ⟹   XP_063137327
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82240,358,149 - 240,529,122 (-)NCBI
RefSeq Acc Id: XM_063281258   ⟹   XP_063137328
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82240,358,150 - 240,529,122 (-)NCBI
RefSeq Acc Id: XM_063281259   ⟹   XP_063137329
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82240,356,176 - 240,529,122 (-)NCBI
RefSeq Acc Id: XM_063281260   ⟹   XP_063137330
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82240,358,194 - 240,529,122 (-)NCBI
RefSeq Acc Id: XM_063281261   ⟹   XP_063137331
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82240,356,176 - 240,529,122 (-)NCBI
RefSeq Acc Id: XM_063281262   ⟹   XP_063137332
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82240,358,194 - 240,529,122 (-)NCBI
RefSeq Acc Id: XM_063281263   ⟹   XP_063137333
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82240,356,176 - 240,529,122 (-)NCBI
RefSeq Acc Id: XM_063281264   ⟹   XP_063137334
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82240,356,176 - 240,530,959 (-)NCBI
RefSeq Acc Id: XM_063281265   ⟹   XP_063137335
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82240,356,176 - 240,529,122 (-)NCBI
RefSeq Acc Id: XM_063281266   ⟹   XP_063137336
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82240,356,176 - 240,530,392 (-)NCBI
RefSeq Acc Id: XM_063281267   ⟹   XP_063137337
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82240,358,196 - 240,529,122 (-)NCBI
RefSeq Acc Id: XM_063281268   ⟹   XP_063137338
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82240,356,176 - 240,530,959 (-)NCBI
Protein Sequences
Protein RefSeqs NP_001177404 (Get FASTA)   NCBI Sequence Viewer  
  NP_001289137 (Get FASTA)   NCBI Sequence Viewer  
  NP_001289138 (Get FASTA)   NCBI Sequence Viewer  
  NP_001289139 (Get FASTA)   NCBI Sequence Viewer  
  NP_001289140 (Get FASTA)   NCBI Sequence Viewer  
  NP_001289141 (Get FASTA)   NCBI Sequence Viewer  
  NP_599235 (Get FASTA)   NCBI Sequence Viewer  
  XP_038957560 (Get FASTA)   NCBI Sequence Viewer  
  XP_038957565 (Get FASTA)   NCBI Sequence Viewer  
  XP_038957567 (Get FASTA)   NCBI Sequence Viewer  
  XP_038957573 (Get FASTA)   NCBI Sequence Viewer  
  XP_038957578 (Get FASTA)   NCBI Sequence Viewer  
  XP_063137292 (Get FASTA)   NCBI Sequence Viewer  
  XP_063137293 (Get FASTA)   NCBI Sequence Viewer  
  XP_063137294 (Get FASTA)   NCBI Sequence Viewer  
  XP_063137295 (Get FASTA)   NCBI Sequence Viewer  
  XP_063137296 (Get FASTA)   NCBI Sequence Viewer  
  XP_063137297 (Get FASTA)   NCBI Sequence Viewer  
  XP_063137298 (Get FASTA)   NCBI Sequence Viewer  
  XP_063137299 (Get FASTA)   NCBI Sequence Viewer  
  XP_063137300 (Get FASTA)   NCBI Sequence Viewer  
  XP_063137301 (Get FASTA)   NCBI Sequence Viewer  
  XP_063137302 (Get FASTA)   NCBI Sequence Viewer  
  XP_063137303 (Get FASTA)   NCBI Sequence Viewer  
  XP_063137304 (Get FASTA)   NCBI Sequence Viewer  
  XP_063137305 (Get FASTA)   NCBI Sequence Viewer  
  XP_063137306 (Get FASTA)   NCBI Sequence Viewer  
  XP_063137307 (Get FASTA)   NCBI Sequence Viewer  
  XP_063137308 (Get FASTA)   NCBI Sequence Viewer  
  XP_063137309 (Get FASTA)   NCBI Sequence Viewer  
  XP_063137310 (Get FASTA)   NCBI Sequence Viewer  
  XP_063137313 (Get FASTA)   NCBI Sequence Viewer  
  XP_063137314 (Get FASTA)   NCBI Sequence Viewer  
  XP_063137315 (Get FASTA)   NCBI Sequence Viewer  
  XP_063137316 (Get FASTA)   NCBI Sequence Viewer  
  XP_063137317 (Get FASTA)   NCBI Sequence Viewer  
  XP_063137318 (Get FASTA)   NCBI Sequence Viewer  
  XP_063137319 (Get FASTA)   NCBI Sequence Viewer  
  XP_063137320 (Get FASTA)   NCBI Sequence Viewer  
  XP_063137321 (Get FASTA)   NCBI Sequence Viewer  
  XP_063137322 (Get FASTA)   NCBI Sequence Viewer  
  XP_063137323 (Get FASTA)   NCBI Sequence Viewer  
  XP_063137324 (Get FASTA)   NCBI Sequence Viewer  
  XP_063137325 (Get FASTA)   NCBI Sequence Viewer  
  XP_063137326 (Get FASTA)   NCBI Sequence Viewer  
  XP_063137327 (Get FASTA)   NCBI Sequence Viewer  
  XP_063137328 (Get FASTA)   NCBI Sequence Viewer  
  XP_063137329 (Get FASTA)   NCBI Sequence Viewer  
  XP_063137330 (Get FASTA)   NCBI Sequence Viewer  
  XP_063137331 (Get FASTA)   NCBI Sequence Viewer  
  XP_063137332 (Get FASTA)   NCBI Sequence Viewer  
  XP_063137333 (Get FASTA)   NCBI Sequence Viewer  
  XP_063137334 (Get FASTA)   NCBI Sequence Viewer  
  XP_063137335 (Get FASTA)   NCBI Sequence Viewer  
  XP_063137336 (Get FASTA)   NCBI Sequence Viewer  
  XP_063137337 (Get FASTA)   NCBI Sequence Viewer  
  XP_063137338 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAC62654 (Get FASTA)   NCBI Sequence Viewer  
  AAC62655 (Get FASTA)   NCBI Sequence Viewer  
  AAC62656 (Get FASTA)   NCBI Sequence Viewer  
  AAC62657 (Get FASTA)   NCBI Sequence Viewer  
  AAC62658 (Get FASTA)   NCBI Sequence Viewer  
  AAC62659 (Get FASTA)   NCBI Sequence Viewer  
  AAC77815 (Get FASTA)   NCBI Sequence Viewer  
  EDL82446 (Get FASTA)   NCBI Sequence Viewer  
  EDL82447 (Get FASTA)   NCBI Sequence Viewer  
  EDL82448 (Get FASTA)   NCBI Sequence Viewer  
  EDL82449 (Get FASTA)   NCBI Sequence Viewer  
  EDL82450 (Get FASTA)   NCBI Sequence Viewer  
  EDL82451 (Get FASTA)   NCBI Sequence Viewer  
  EDL82452 (Get FASTA)   NCBI Sequence Viewer  
  EDL82453 (Get FASTA)   NCBI Sequence Viewer  
  EDL82454 (Get FASTA)   NCBI Sequence Viewer  
  EDL82455 (Get FASTA)   NCBI Sequence Viewer  
  EDL82456 (Get FASTA)   NCBI Sequence Viewer  
  EDL82457 (Get FASTA)   NCBI Sequence Viewer  
  EDL82458 (Get FASTA)   NCBI Sequence Viewer  
  EDL82459 (Get FASTA)   NCBI Sequence Viewer  
  EDL82460 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000042136
  ENSRNOP00000042136.5
  ENSRNOP00000077192
  ENSRNOP00000077192.1
  ENSRNOP00000081092.1
  ENSRNOP00000081097.1
  ENSRNOP00000081656.1
  ENSRNOP00000083029.1
  ENSRNOP00000083919.1
  ENSRNOP00000084635
  ENSRNOP00000084635.1
  ENSRNOP00000085342
  ENSRNOP00000085342.1
  ENSRNOP00000085707
  ENSRNOP00000085707.1
  ENSRNOP00000086180.1
  ENSRNOP00000089949.1
  ENSRNOP00000090257.1
  ENSRNOP00000092213.1
  ENSRNOP00000095428.1
  ENSRNOP00000095749.1
  ENSRNOP00000097806.1
GenBank Protein O88923 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: NP_599235   ⟸   NM_134408
- Peptide Label: isoform 1 precursor
- UniProtKB: Q9Z174 (UniProtKB/Swiss-Prot),   O88922 (UniProtKB/Swiss-Prot),   O88921 (UniProtKB/Swiss-Prot),   O88920 (UniProtKB/Swiss-Prot),   O88919 (UniProtKB/Swiss-Prot),   O88918 (UniProtKB/Swiss-Prot),   O88923 (UniProtKB/Swiss-Prot),   F1M7T0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001177404   ⟸   NM_001190475
- Peptide Label: isoform 2 precursor
- UniProtKB: A0A8I6A5I7 (UniProtKB/TrEMBL),   A6HWH0 (UniProtKB/TrEMBL),   D3ZBE9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001289139   ⟸   NM_001302210
- Peptide Label: isoform 5 precursor
- UniProtKB: A6HWG0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001289141   ⟸   NM_001302212
- Peptide Label: isoform 7 precursor
- UniProtKB: A6HWG3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001289138   ⟸   NM_001302209
- Peptide Label: isoform 4 precursor
- UniProtKB: A6HWG5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001289137   ⟸   NM_001302208
- Peptide Label: isoform 3 precursor
- UniProtKB: A6HWG7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001289140   ⟸   NM_001302211
- Peptide Label: isoform 6 precursor
- UniProtKB: A0A8I5ZZY9 (UniProtKB/TrEMBL),   A6HWG9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000042136   ⟸   ENSRNOT00000045905
RefSeq Acc Id: ENSRNOP00000041829   ⟸   ENSRNOT00000045020
RefSeq Acc Id: ENSRNOP00000043979   ⟸   ENSRNOT00000042256
RefSeq Acc Id: XP_038957567   ⟸   XM_039101639
- Peptide Label: isoform X10
- UniProtKB: A6HWG5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038957560   ⟸   XM_039101632
- Peptide Label: isoform X2
- UniProtKB: A6HWH0 (UniProtKB/TrEMBL),   D3ZBE9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038957565   ⟸   XM_039101637
- Peptide Label: isoform X7
- UniProtKB: A6HWG5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038957578   ⟸   XM_039101650
- Peptide Label: isoform X20
- UniProtKB: A0A8I5ZUN4 (UniProtKB/TrEMBL),   A6HWG3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038957573   ⟸   XM_039101645
- Peptide Label: isoform X16
- UniProtKB: A6HWG3 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSRNOP00000081656   ⟸   ENSRNOT00000095458
RefSeq Acc Id: ENSRNOP00000084635   ⟸   ENSRNOT00000120239
RefSeq Acc Id: ENSRNOP00000077192   ⟸   ENSRNOT00000110831
RefSeq Acc Id: ENSRNOP00000081092   ⟸   ENSRNOT00000115673
RefSeq Acc Id: ENSRNOP00000085707   ⟸   ENSRNOT00000105330
RefSeq Acc Id: ENSRNOP00000097806   ⟸   ENSRNOT00000119633
RefSeq Acc Id: ENSRNOP00000085342   ⟸   ENSRNOT00000096110
RefSeq Acc Id: ENSRNOP00000090257   ⟸   ENSRNOT00000111340
RefSeq Acc Id: ENSRNOP00000089949   ⟸   ENSRNOT00000116263
RefSeq Acc Id: ENSRNOP00000083029   ⟸   ENSRNOT00000109156
RefSeq Acc Id: ENSRNOP00000095428   ⟸   ENSRNOT00000112743
RefSeq Acc Id: ENSRNOP00000086180   ⟸   ENSRNOT00000115240
RefSeq Acc Id: ENSRNOP00000095749   ⟸   ENSRNOT00000095993
RefSeq Acc Id: ENSRNOP00000083919   ⟸   ENSRNOT00000099353
RefSeq Acc Id: ENSRNOP00000092213   ⟸   ENSRNOT00000107980
RefSeq Acc Id: ENSRNOP00000081097   ⟸   ENSRNOT00000117907
RefSeq Acc Id: XP_063137293   ⟸   XM_063281223
- Peptide Label: isoform X1
RefSeq Acc Id: XP_063137338   ⟸   XM_063281268
- Peptide Label: isoform X40
RefSeq Acc Id: XP_063137316   ⟸   XM_063281246
- Peptide Label: isoform X20
- UniProtKB: A0A8I5ZUN4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063137304   ⟸   XM_063281234
- Peptide Label: isoform X10
RefSeq Acc Id: XP_063137334   ⟸   XM_063281264
- Peptide Label: isoform X37
RefSeq Acc Id: XP_063137301   ⟸   XM_063281231
- Peptide Label: isoform X7
RefSeq Acc Id: XP_063137295   ⟸   XM_063281225
- Peptide Label: isoform X1
RefSeq Acc Id: XP_063137315   ⟸   XM_063281245
- Peptide Label: isoform X20
- UniProtKB: A0A8I5ZUN4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063137336   ⟸   XM_063281266
- Peptide Label: isoform X38
RefSeq Acc Id: XP_063137309   ⟸   XM_063281239
- Peptide Label: isoform X16
RefSeq Acc Id: XP_063137294   ⟸   XM_063281224
- Peptide Label: isoform X1
RefSeq Acc Id: XP_063137324   ⟸   XM_063281254
- Peptide Label: isoform X28
RefSeq Acc Id: XP_063137320   ⟸   XM_063281250
- Peptide Label: isoform X24
RefSeq Acc Id: XP_063137322   ⟸   XM_063281252
- Peptide Label: isoform X26
RefSeq Acc Id: XP_063137317   ⟸   XM_063281247
- Peptide Label: isoform X21
RefSeq Acc Id: XP_063137323   ⟸   XM_063281253
- Peptide Label: isoform X27
RefSeq Acc Id: XP_063137318   ⟸   XM_063281248
- Peptide Label: isoform X22
RefSeq Acc Id: XP_063137321   ⟸   XM_063281251
- Peptide Label: isoform X25
RefSeq Acc Id: XP_063137310   ⟸   XM_063281240
- Peptide Label: isoform X17
RefSeq Acc Id: XP_063137308   ⟸   XM_063281238
- Peptide Label: isoform X15
RefSeq Acc Id: XP_063137319   ⟸   XM_063281249
- Peptide Label: isoform X23
RefSeq Acc Id: XP_063137335   ⟸   XM_063281265
- Peptide Label: isoform X38
RefSeq Acc Id: XP_063137313   ⟸   XM_063281243
- Peptide Label: isoform X18
RefSeq Acc Id: XP_063137307   ⟸   XM_063281237
- Peptide Label: isoform X14
RefSeq Acc Id: XP_063137299   ⟸   XM_063281229
- Peptide Label: isoform X6
RefSeq Acc Id: XP_063137300   ⟸   XM_063281230
- Peptide Label: isoform X8
RefSeq Acc Id: XP_063137297   ⟸   XM_063281227
- Peptide Label: isoform X4
RefSeq Acc Id: XP_063137314   ⟸   XM_063281244
- Peptide Label: isoform X19
RefSeq Acc Id: XP_063137302   ⟸   XM_063281232
- Peptide Label: isoform X9
RefSeq Acc Id: XP_063137333   ⟸   XM_063281263
- Peptide Label: isoform X37
RefSeq Acc Id: XP_063137298   ⟸   XM_063281228
- Peptide Label: isoform X5
RefSeq Acc Id: XP_063137305   ⟸   XM_063281235
- Peptide Label: isoform X12
RefSeq Acc Id: XP_063137306   ⟸   XM_063281236
- Peptide Label: isoform X13
RefSeq Acc Id: XP_063137331   ⟸   XM_063281261
- Peptide Label: isoform X35
RefSeq Acc Id: XP_063137296   ⟸   XM_063281226
- Peptide Label: isoform X3
RefSeq Acc Id: XP_063137303   ⟸   XM_063281233
- Peptide Label: isoform X11
RefSeq Acc Id: XP_063137329   ⟸   XM_063281259
- Peptide Label: isoform X33
RefSeq Acc Id: XP_063137292   ⟸   XM_063281222
- Peptide Label: isoform X1
RefSeq Acc Id: XP_063137325   ⟸   XM_063281255
- Peptide Label: isoform X29
RefSeq Acc Id: XP_063137327   ⟸   XM_063281257
- Peptide Label: isoform X31
RefSeq Acc Id: XP_063137326   ⟸   XM_063281256
- Peptide Label: isoform X30
RefSeq Acc Id: XP_063137328   ⟸   XM_063281258
- Peptide Label: isoform X32
RefSeq Acc Id: XP_063137332   ⟸   XM_063281262
- Peptide Label: isoform X36
RefSeq Acc Id: XP_063137330   ⟸   XM_063281260
- Peptide Label: isoform X34
RefSeq Acc Id: XP_063137337   ⟸   XM_063281267
- Peptide Label: isoform X39
Protein Domains
G-protein coupled receptors family 2 profile   GPS   Olfactomedin-like   SUEL-type lectin

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-O88923-F1-model_v2 AlphaFold O88923 1-1487 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:620835 AgrOrtholog
BioCyc Gene G2FUF-50876 BioCyc
Ensembl Genes ENSRNOG00000032660 Ensembl
  ENSRNOG00000063253 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSRNOG00000065347 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000045905 ENTREZGENE
  ENSRNOT00000045905.6 UniProtKB/TrEMBL
  ENSRNOT00000095458.1 UniProtKB/TrEMBL
  ENSRNOT00000095993.1 UniProtKB/TrEMBL
  ENSRNOT00000096110 ENTREZGENE
  ENSRNOT00000096110.1 UniProtKB/TrEMBL
  ENSRNOT00000099353.1 UniProtKB/TrEMBL
  ENSRNOT00000105330 ENTREZGENE
  ENSRNOT00000105330.1 UniProtKB/TrEMBL
  ENSRNOT00000107980.1 UniProtKB/TrEMBL
  ENSRNOT00000109156.1 UniProtKB/TrEMBL
  ENSRNOT00000110831.1 UniProtKB/TrEMBL
  ENSRNOT00000111340.1 UniProtKB/TrEMBL
  ENSRNOT00000112743.1 UniProtKB/TrEMBL
  ENSRNOT00000115240.1 UniProtKB/TrEMBL
  ENSRNOT00000115673.1 UniProtKB/TrEMBL
  ENSRNOT00000116263.1 UniProtKB/TrEMBL
  ENSRNOT00000117907.1 UniProtKB/TrEMBL
  ENSRNOT00000119633.1 UniProtKB/TrEMBL
  ENSRNOT00000120239 ENTREZGENE
  ENSRNOT00000120239.1 UniProtKB/TrEMBL
Gene3D-CATH 1.25.40.610 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  2.60.120.740 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  2.60.220.50 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  4.10.1240.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Rhodopsin 7-helix transmembrane proteins UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro GAIN_dom_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GAIN_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GPCR_2-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GPCR_2_extracell_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GPCR_2_extracellular_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GPCR_2_latrophilin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GPCR_2_latrophilin_rcpt_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GPCR_2_secretin-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GPCR_2_secretin-like_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GPS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Lectin_gal-bd_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Lectin_gal-bd_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Olfac-like_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report rno:171447 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
NCBI Gene 171447 ENTREZGENE
PANTHER ADHESION G-PROTEIN COUPLED RECEPTOR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR12011:SF61 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam 7tm_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GAIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Gal_Lectin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GPS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  HRM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Latrophilin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  OLF UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Adgrl2 PhenoGen
PRINTS GPCRSECRETIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  LATROPHILIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F2_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F2_3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F2_4 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GPS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  OLF UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SUEL_LECTIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
RatGTEx ENSRNOG00000032660 RatGTEx
  ENSRNOG00000063253 RatGTEx
  ENSRNOG00000065347 RatGTEx
SMART GPS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  HormR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  OLF UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A8I5ZUN4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I5ZZY9 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6A5I7 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6AAV1_RAT UniProtKB/TrEMBL
  A0A8I6ADA2_RAT UniProtKB/TrEMBL
  A0A8I6AG40_RAT UniProtKB/TrEMBL
  A0A8I6G7I4_RAT UniProtKB/TrEMBL
  A6HWG0 ENTREZGENE, UniProtKB/TrEMBL
  A6HWG3 ENTREZGENE, UniProtKB/TrEMBL
  A6HWG5 ENTREZGENE, UniProtKB/TrEMBL
  A6HWG7 ENTREZGENE, UniProtKB/TrEMBL
  A6HWG9 ENTREZGENE, UniProtKB/TrEMBL
  A6HWH0 ENTREZGENE, UniProtKB/TrEMBL
  AGRL2_RAT UniProtKB/Swiss-Prot
  D3ZBE9 ENTREZGENE, UniProtKB/TrEMBL
  F1M7T0 ENTREZGENE, UniProtKB/TrEMBL
  O88918 ENTREZGENE
  O88919 ENTREZGENE
  O88920 ENTREZGENE
  O88921 ENTREZGENE
  O88922 ENTREZGENE
  O88923 ENTREZGENE
  Q9Z174 ENTREZGENE
UniProt Secondary O88918 UniProtKB/Swiss-Prot
  O88919 UniProtKB/Swiss-Prot
  O88920 UniProtKB/Swiss-Prot
  O88921 UniProtKB/Swiss-Prot
  O88922 UniProtKB/Swiss-Prot
  Q9Z174 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-03-16 Adgrl2  adhesion G protein-coupled receptor L2  Lphn2  latrophilin 2  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2004-09-10 Lphn2  latrophilin 2  Cirl2  calcium-independent alpha-latrotoxin receptor homolog 2  Symbol and Name updated 1299863 APPROVED
2002-08-07 Cirl2  calcium-independent alpha-latrotoxin receptor homolog 2      Symbol and Name status set to provisional 70820 PROVISIONAL

RGD Curation Notes
Note Type Note Reference
gene_expression expressed in placenta, kidney, spleen, ovary, heart, and lung 632388
gene_product member of the CIRL family, a subfamily of large orphan receptors with structural features typical of both G-protein-coupled receptors and cell adhesion proteins 632388