Imported Disease Annotations - CTDTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | diffuse large B-cell lymphoma | | ISO | SEC31A (Homo sapiens) | 11554173 | CTD Direct Evidence: marker/mechanism | CTD | PMID:22474449 | |
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Imported Disease Annotations - CTDTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | diffuse large B-cell lymphoma | | ISO | SEC31A (Homo sapiens) | 11554173 | CTD Direct Evidence: marker/mechanism | CTD | PMID:22474449 | |
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# | Reference Title | Reference Citation |
1. | Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. | Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27. |
2. | Rat ISS GO annotations from GOA human gene data--August 2006 | GOA data from the GO Consortium |
3. | Antibodies to an epitope on synapsin I detect a protein associated with the endocytic compartment in non-neuronal cells. | Matovcik LM, etal., Eur J Cell Biol 1994 Dec;65(2):327-40. |
4. | Electronic Transfer of LocusLink and RefSeq Data | NCBI rat LocusLink and RefSeq merged data July 26, 2002 |
5. | KEGG Annotation Import Pipeline | Pipeline to import KEGG annotations from KEGG into RGD |
6. | Data Import for Chemical-Gene Interactions | RGD automated import pipeline for gene-chemical interactions |
PMID:12477932 | PMID:16957052 | PMID:17196169 | PMID:17499046 | PMID:18843296 | PMID:19401338 | PMID:21640725 | PMID:22358839 | PMID:22792322 | PMID:22802641 | PMID:24239381 | PMID:25002582 |
PMID:25201882 | PMID:26514267 | PMID:27716508 | PMID:28442536 | PMID:28627649 | PMID:29716612 | PMID:30053369 | PMID:30361391 | PMID:35659652 |
Sec31a (Rattus norvegicus - Norway rat) |
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SEC31A (Homo sapiens - human) |
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Sec31a (Mus musculus - house mouse) |
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Sec31a (Chinchilla lanigera - long-tailed chinchilla) |
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SEC31A (Pan paniscus - bonobo/pygmy chimpanzee) |
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SEC31A (Canis lupus familiaris - dog) |
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Sec31a (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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SEC31A (Sus scrofa - pig) |
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SEC31A (Chlorocebus sabaeus - green monkey) |
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Sec31a (Heterocephalus glaber - naked mole-rat) |
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Variants in Sec31a
404 total Variants |
The detailed report is available here: | Full Report | CSV | TAB | Printer | ||||
miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/). For more information about miRGate, see PMID:25858286 or access the full paper here. |
The following QTLs overlap with this region. | Full Report | CSV | TAB | Printer | Gviewer |
RH140247 |
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alimentary part of gastrointestinal system | circulatory system | endocrine system | exocrine system | hemolymphoid system | hepatobiliary system | integumental system | musculoskeletal system | nervous system | renal system | reproductive system | respiratory system | appendage | |
High | |||||||||||||
Medium | 3 | 42 | 57 | 41 | 19 | 41 | 2 | 5 | 72 | 35 | 41 | 11 | 2 |
Low | 1 | 6 | 6 | 2 | 6 | ||||||||
Below cutoff |
RefSeq Transcripts | NM_033021 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
XM_006250677 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_006250678 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_006250679 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_006250680 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_006250681 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_006250682 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_006250683 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_006250684 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_006250685 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_006250686 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_006250687 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_006250688 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_006250689 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_006250690 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_039092523 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063273696 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063273697 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063273698 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063273699 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063273700 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063273701 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063273702 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063273703 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063273704 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063273705 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063273706 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063273707 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063273708 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063273709 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063273710 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063273711 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063273712 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063273713 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063273714 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063273715 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
GenBank Nucleotide | AC099384 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
AF034582 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BC085722 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
CH474022 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
JAXUCZ010000014 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
RefSeq Acc Id: | ENSRNOT00000003072 ⟹ ENSRNOP00000003072 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | ENSRNOT00000033489 ⟹ ENSRNOP00000038196 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | ENSRNOT00000091367 ⟹ ENSRNOP00000071621 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | ENSRNOT00000097169 ⟹ ENSRNOP00000079808 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENSRNOT00000116260 ⟹ ENSRNOP00000085826 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | NM_033021 ⟹ NP_148981 | ||||||||||||||||||||||||||||
RefSeq Status: | PROVISIONAL | ||||||||||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_006250677 ⟹ XP_006250739 | ||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_006250678 ⟹ XP_006250740 | ||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_006250679 ⟹ XP_006250741 | ||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_006250680 ⟹ XP_006250742 | ||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_006250681 ⟹ XP_006250743 | ||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_006250682 ⟹ XP_006250744 | ||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_006250683 ⟹ XP_006250745 | ||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_006250684 ⟹ XP_006250746 | ||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_006250685 ⟹ XP_006250747 | ||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_006250686 ⟹ XP_006250748 | ||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_006250687 ⟹ XP_006250749 | ||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_006250688 ⟹ XP_006250750 | ||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_006250689 ⟹ XP_006250751 | ||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_006250690 ⟹ XP_006250752 | ||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_039092523 ⟹ XP_038948451 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | XM_063273696 ⟹ XP_063129766 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063273697 ⟹ XP_063129767 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063273698 ⟹ XP_063129768 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063273699 ⟹ XP_063129769 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063273700 ⟹ XP_063129770 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063273701 ⟹ XP_063129771 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063273702 ⟹ XP_063129772 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063273703 ⟹ XP_063129773 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063273704 ⟹ XP_063129774 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063273705 ⟹ XP_063129775 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063273706 ⟹ XP_063129776 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063273707 ⟹ XP_063129777 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063273708 ⟹ XP_063129778 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063273709 ⟹ XP_063129779 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063273710 ⟹ XP_063129780 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063273711 ⟹ XP_063129781 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063273712 ⟹ XP_063129782 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063273713 ⟹ XP_063129783 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063273714 ⟹ XP_063129784 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063273715 ⟹ XP_063129785 | ||||||||
Type: | CODING | ||||||||
Position: |
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Protein RefSeqs | NP_148981 | (Get FASTA) | NCBI Sequence Viewer |
XP_006250739 | (Get FASTA) | NCBI Sequence Viewer | |
XP_006250740 | (Get FASTA) | NCBI Sequence Viewer | |
XP_006250741 | (Get FASTA) | NCBI Sequence Viewer | |
XP_006250742 | (Get FASTA) | NCBI Sequence Viewer | |
XP_006250743 | (Get FASTA) | NCBI Sequence Viewer | |
XP_006250744 | (Get FASTA) | NCBI Sequence Viewer | |
XP_006250745 | (Get FASTA) | NCBI Sequence Viewer | |
XP_006250746 | (Get FASTA) | NCBI Sequence Viewer | |
XP_006250747 | (Get FASTA) | NCBI Sequence Viewer | |
XP_006250748 | (Get FASTA) | NCBI Sequence Viewer | |
XP_006250749 | (Get FASTA) | NCBI Sequence Viewer | |
XP_006250750 | (Get FASTA) | NCBI Sequence Viewer | |
XP_006250751 | (Get FASTA) | NCBI Sequence Viewer | |
XP_006250752 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038948451 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063129766 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063129767 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063129768 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063129769 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063129770 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063129771 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063129772 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063129773 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063129774 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063129775 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063129776 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063129777 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063129778 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063129779 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063129780 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063129781 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063129782 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063129783 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063129784 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063129785 | (Get FASTA) | NCBI Sequence Viewer | |
GenBank Protein | AAD01990 | (Get FASTA) | NCBI Sequence Viewer |
AAH85722 | (Get FASTA) | NCBI Sequence Viewer | |
EDL99572 | (Get FASTA) | NCBI Sequence Viewer | |
EDL99573 | (Get FASTA) | NCBI Sequence Viewer | |
EDL99574 | (Get FASTA) | NCBI Sequence Viewer | |
Ensembl Protein | ENSRNOP00000003072 | ||
ENSRNOP00000003072.3 | |||
ENSRNOP00000038196 | |||
ENSRNOP00000038196.5 | |||
ENSRNOP00000071621 | |||
ENSRNOP00000071621.2 | |||
ENSRNOP00000079808.1 | |||
ENSRNOP00000085826 | |||
ENSRNOP00000085826.1 | |||
GenBank Protein | Q9Z2Q1 | (Get FASTA) | NCBI Sequence Viewer |
RefSeq Acc Id: | NP_148981 ⟸ NM_033021 |
- UniProtKB: | Q9Z2Q1 (UniProtKB/Swiss-Prot), Q5RKK4 (UniProtKB/Swiss-Prot), G3V699 (UniProtKB/TrEMBL), A6K602 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_006250740 ⟸ XM_006250678 |
- Peptide Label: | isoform X2 |
- UniProtKB: | Q9Z2Q1 (UniProtKB/Swiss-Prot), Q5RKK4 (UniProtKB/Swiss-Prot) |
- Sequence: |
RefSeq Acc Id: | XP_006250742 ⟸ XM_006250680 |
- Peptide Label: | isoform X4 |
- UniProtKB: | Q9Z2Q1 (UniProtKB/Swiss-Prot), Q5RKK4 (UniProtKB/Swiss-Prot) |
- Sequence: |
RefSeq Acc Id: | XP_006250749 ⟸ XM_006250687 |
- Peptide Label: | isoform X22 |
- UniProtKB: | Q9Z2Q1 (UniProtKB/Swiss-Prot), Q5RKK4 (UniProtKB/Swiss-Prot) |
- Sequence: |
RefSeq Acc Id: | XP_006250743 ⟸ XM_006250681 |
- Peptide Label: | isoform X5 |
- UniProtKB: | A0A0G2K0X9 (UniProtKB/TrEMBL), A6K603 (UniProtKB/TrEMBL), A0A8I5ZP55 (UniProtKB/TrEMBL), A0A8I6GED0 (UniProtKB/TrEMBL), A6K604 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_006250745 ⟸ XM_006250683 |
- Peptide Label: | isoform X8 |
- UniProtKB: | A0A8I5ZP55 (UniProtKB/TrEMBL), A6K604 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_006250746 ⟸ XM_006250684 |
- Peptide Label: | isoform X13 |
- UniProtKB: | A0A8I5ZP55 (UniProtKB/TrEMBL), A6K604 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_006250750 ⟸ XM_006250688 |
- Peptide Label: | isoform X23 |
- UniProtKB: | A0A8L2QIX3 (UniProtKB/TrEMBL), A0A8I5ZP55 (UniProtKB/TrEMBL), A6K604 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_006250741 ⟸ XM_006250679 |
- Peptide Label: | isoform X3 |
- UniProtKB: | Q9Z2Q1 (UniProtKB/Swiss-Prot), Q5RKK4 (UniProtKB/Swiss-Prot) |
- Sequence: |
RefSeq Acc Id: | XP_006250744 ⟸ XM_006250682 |
- Peptide Label: | isoform X7 |
- UniProtKB: | A0A8I6GED0 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_006250747 ⟸ XM_006250685 |
- Peptide Label: | isoform X19 |
- UniProtKB: | A0A8I5ZP55 (UniProtKB/TrEMBL), A0A8I6GED0 (UniProtKB/TrEMBL), A6K604 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_006250748 ⟸ XM_006250686 |
- Peptide Label: | isoform X21 |
- UniProtKB: | A0A8I5ZP55 (UniProtKB/TrEMBL), A6K604 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_006250751 ⟸ XM_006250689 |
- Peptide Label: | isoform X26 |
- UniProtKB: | A0A8I5ZP55 (UniProtKB/TrEMBL), A0A8I6GED0 (UniProtKB/TrEMBL), A6K604 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_006250752 ⟸ XM_006250690 |
- Peptide Label: | isoform X26 |
- UniProtKB: | A0A8I5ZP55 (UniProtKB/TrEMBL), A0A8I6GED0 (UniProtKB/TrEMBL), A6K604 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_006250739 ⟸ XM_006250677 |
- Peptide Label: | isoform X1 |
- UniProtKB: | Q9Z2Q1 (UniProtKB/Swiss-Prot), Q5RKK4 (UniProtKB/Swiss-Prot) |
- Sequence: |
RefSeq Acc Id: | ENSRNOP00000038196 ⟸ ENSRNOT00000033489 |
RefSeq Acc Id: | ENSRNOP00000071621 ⟸ ENSRNOT00000091367 |
RefSeq Acc Id: | ENSRNOP00000003072 ⟸ ENSRNOT00000003072 |
RefSeq Acc Id: | XP_038948451 ⟸ XM_039092523 |
- Peptide Label: | isoform X25 |
- UniProtKB: | A0A8I5ZP55 (UniProtKB/TrEMBL), A6K604 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | ENSRNOP00000079808 ⟸ ENSRNOT00000097169 |
RefSeq Acc Id: | ENSRNOP00000085826 ⟸ ENSRNOT00000116260 |
RefSeq Acc Id: | XP_063129775 ⟸ XM_063273705 |
- Peptide Label: | isoform X14 |
RefSeq Acc Id: | XP_063129780 ⟸ XM_063273710 |
- Peptide Label: | isoform X18 |
RefSeq Acc Id: | XP_063129766 ⟸ XM_063273696 |
- Peptide Label: | isoform X5 |
RefSeq Acc Id: | XP_063129768 ⟸ XM_063273698 |
- Peptide Label: | isoform X8 |
RefSeq Acc Id: | XP_063129774 ⟸ XM_063273704 |
- Peptide Label: | isoform X13 |
RefSeq Acc Id: | XP_063129784 ⟸ XM_063273714 |
- Peptide Label: | isoform X23 |
RefSeq Acc Id: | XP_063129773 ⟸ XM_063273703 |
- Peptide Label: | isoform X12 |
RefSeq Acc Id: | XP_063129777 ⟸ XM_063273707 |
- Peptide Label: | isoform X15 |
RefSeq Acc Id: | XP_063129781 ⟸ XM_063273711 |
- Peptide Label: | isoform X19 |
RefSeq Acc Id: | XP_063129783 ⟸ XM_063273713 |
- Peptide Label: | isoform X21 |
RefSeq Acc Id: | XP_063129770 ⟸ XM_063273700 |
- Peptide Label: | isoform X10 |
RefSeq Acc Id: | XP_063129769 ⟸ XM_063273699 |
- Peptide Label: | isoform X9 |
RefSeq Acc Id: | XP_063129767 ⟸ XM_063273697 |
- Peptide Label: | isoform X6 |
RefSeq Acc Id: | XP_063129772 ⟸ XM_063273702 |
- Peptide Label: | isoform X12 |
RefSeq Acc Id: | XP_063129776 ⟸ XM_063273706 |
- Peptide Label: | isoform X15 |
RefSeq Acc Id: | XP_063129779 ⟸ XM_063273709 |
- Peptide Label: | isoform X17 |
RefSeq Acc Id: | XP_063129782 ⟸ XM_063273712 |
- Peptide Label: | isoform X20 |
RefSeq Acc Id: | XP_063129771 ⟸ XM_063273701 |
- Peptide Label: | isoform X11 |
RefSeq Acc Id: | XP_063129785 ⟸ XM_063273715 |
- Peptide Label: | isoform X24 |
RefSeq Acc Id: | XP_063129778 ⟸ XM_063273708 |
- Peptide Label: | isoform X16 |
Name | Modeler | Protein Id | AA Range | Protein Structure |
AF-Q9Z2Q1-F1-model_v2 | AlphaFold | Q9Z2Q1 | 1-1249 | view protein structure |
eQTL | View at Phenogen | |
WGCNA | View at Phenogen | |
Tissue/Strain Expression | View at Phenogen |
RGD ID: | 13699196 | ||||||||
Promoter ID: | EPDNEW_R9720 | ||||||||
Type: | initiation region | ||||||||
Name: | Sec31a_1 | ||||||||
Description: | SEC31 homolog A, COPII coat complex component | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||
Experiment Methods: | Single-end sequencing. | ||||||||
Position: |
|
Database | Acc Id | Source(s) |
AGR Gene | RGD:620233 | AgrOrtholog |
BioCyc Gene | G2FUF-16398 | BioCyc |
Ensembl Genes | ENSRNOG00000002251 | Ensembl, ENTREZGENE, UniProtKB/TrEMBL |
Ensembl Transcript | ENSRNOT00000003072 | ENTREZGENE |
ENSRNOT00000003072.6 | UniProtKB/TrEMBL | |
ENSRNOT00000033489.6 | UniProtKB/TrEMBL | |
ENSRNOT00000091367.2 | UniProtKB/TrEMBL | |
ENSRNOT00000097169.1 | UniProtKB/TrEMBL | |
ENSRNOT00000116260.1 | UniProtKB/TrEMBL | |
Gene3D-CATH | 1.25.40.1030 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
2.130.10.10 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Functional domain of the splicing factor Prp18 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
IMAGE_CLONE | IMAGE:7107486 | IMAGE-MGC_LOAD |
InterPro | ACE1_Sec16_Sec31 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
SEC31-like | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
WD40/YVTN_repeat-like_dom_sf | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
WD40_repeat | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
WD40_repeat_dom_sf | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
KEGG Report | rno:93646 | UniProtKB/Swiss-Prot |
MGC_CLONE | MGC:93320 | IMAGE-MGC_LOAD |
NCBI Gene | 93646 | ENTREZGENE |
PANTHER | PROTEIN TRANSPORT PROTEIN SEC31A | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
PTHR13923 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Pfam | Sec16_C | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
WD40 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
PhenoGen | Sec31a | PhenoGen |
PROSITE | WD_REPEATS_2 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
WD_REPEATS_REGION | UniProtKB/Swiss-Prot | |
RatGTEx | ENSRNOG00000002251 | RatGTEx |
SMART | WD40 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
Superfamily-SCOP | SSF50978 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
UniProt | A0A0G2K0X9 | ENTREZGENE, UniProtKB/TrEMBL |
A0A8I5ZP55 | ENTREZGENE, UniProtKB/TrEMBL | |
A0A8I6GED0 | ENTREZGENE, UniProtKB/TrEMBL | |
A0A8L2QIX3 | ENTREZGENE, UniProtKB/TrEMBL | |
A6K602 | ENTREZGENE, UniProtKB/TrEMBL | |
A6K603 | ENTREZGENE, UniProtKB/TrEMBL | |
A6K604 | ENTREZGENE, UniProtKB/TrEMBL | |
G3V699 | ENTREZGENE, UniProtKB/TrEMBL | |
Q5RKK4 | ENTREZGENE | |
Q9Z2Q1 | ENTREZGENE, UniProtKB/Swiss-Prot | |
UniProt Secondary | Q5RKK4 | UniProtKB/Swiss-Prot |
Date | Current Symbol | Current Name | Previous Symbol | Previous Name | Description | Reference | Status |
---|---|---|---|---|---|---|---|
2015-08-13 | Sec31a | SEC31 homolog A, COPII coat complex component | Sec31a | SEC31 homolog A, COPII coating complex component | Nomenclature updated to reflect human and mouse nomenclature | 1299863 | APPROVED |
2015-07-30 | Sec31a | SEC31 homolog A, COPII coating complex component | Sec31a | SEC31 homolog A (S. cerevisiae) | Nomenclature updated to reflect human and mouse nomenclature | 1299863 | APPROVED |
2008-02-22 | Sec31a | SEC31 homolog A (S. cerevisiae) | Sec31l1 | SEC31-like 1 (S. cerevisiae) | Nomenclature updated to reflect human and mouse nomenclature | 1299863 | APPROVED |
2004-09-10 | Sec31l1 | SEC31-like 1 (S. cerevisiae) | VAP1 | vesicle associated protein | Symbol and Name updated | 1299863 | APPROVED |
2002-08-07 | VAP1 | vesicle associated protein | Symbol and Name status set to provisional | 70820 | PROVISIONAL |
Note Type | Note | Reference |
---|---|---|
gene_expression | expressed in liver, intestinal enterocytes | 634465 |