Gene: Pdpn (podoplanin) Rattus norvegicus
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Symbol: Pdpn
Name: podoplanin
Description: ENCODES a protein that exhibits chaperone binding (ortholog); chemokine binding (ortholog); receptor binding (ortholog); INVOLVED IN cell adhesion; inflammatory response; lung development; ASSOCIATED WITH adult respiratory distress syndrome; Albuminuria; bacterial pneumonia; FOUND IN apical plasma membrane; plasma membrane; basolateral plasma membrane (ortholog); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 3'-amino-3'-deoxy-N(6),N(6)-dimethyladenosine; 3H-1,2-dithiole-3-thione
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: E11; E11 antigen epitope; epithelial cell surface transmembrane protein antigen; glycoprotein 38; Gp38; OTS-8; pulmonary type I alveolar epithelial cell transmembrane differentiation marker; RTI140; RTI40; T1-alpha; T1A; type I cell 40 kDa protein
Orthologs:
Homo sapiens (human) : PDPN (podoplanin)  HGNC  AGR
Mus musculus (house mouse) : Pdpn (podoplanin)  MGI
Chinchilla lanigera (long-tailed chinchilla) : Pdpn (podoplanin)
Pan paniscus (bonobo/pygmy chimpanzee) : PDPN (podoplanin)
Canis lupus familiaris (dog) : PDPN (podoplanin)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Pdpn (podoplanin)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.05161,947,137 - 161,981,441 (-)NCBIRnor6.0rn6Rnor6.0
Rnor_5.05165,646,114 - 165,679,595 (-)NCBIRnor5.0rn5Rnor5.0
RGSC_v3.45162,142,251 - 162,175,921 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.15162,152,438 - 162,186,109 (-)NCBI
Celera5153,929,730 - 153,964,026 (-)NCBI
Cytogenetic Map5q36NCBImapview
RH 3.4 Map51057.9RGD
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Pdpn
AGR Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Map Viewer
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Vista + UCSC

RGD Object Information
RGD ID: 61819
Created: 2001-04-11
Species: Rattus norvegicus
Last Modified: 2017-10-03
Status: ACTIVE