Gene: Atxn1 (ataxin 1) Rattus norvegicus
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Symbol: Atxn1
Name: ataxin 1
Description: ENCODES a protein that exhibits chromatin binding (ortholog); identical protein binding (ortholog); poly(G) binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); excitatory postsynaptic potential (ortholog); lung alveolus development (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis type 13 (ortholog); autosomal dominant cerebellar ataxia (ortholog); GRID2-related spinocerebellar ataxia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear inclusion body (ortholog); INTERACTS WITH aflatoxin B1; ammonium chloride; bisphenol A
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: ataxin-1; RNSCA1; Sca1; spinocerebellar ataxia 1; spinocerebellar ataxia 1 homolog (human); Spinocerebellar ataxia type 1; spinocerebellar ataxia type 1 protein homolog
Orthologs:
Homo sapiens (human) : ATXN1 (ataxin 1)  HGNC
Mus musculus (house mouse) : Atxn1 (ataxin 1)  MGI
Chinchilla lanigera (long-tailed chinchilla) : Atxn1 (ataxin 1)
Pan paniscus (bonobo/pygmy chimpanzee) : ATXN1 (ataxin 1)
Canis lupus familiaris (dog) : ATXN1 (ataxin 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Atxn1 (ataxin 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01719,160,986 - 19,533,814 (+)NCBIRnor6.0rn6Rnor6.0
Rnor_5.01721,544,083 - 21,559,271 (+)NCBIRnor5.0rn5Rnor5.0
Rnor_5.01721,184,036 - 21,473,347 (+)NCBIRnor5.0rn5Rnor5.0
RGSC_v3.41724,719,383 - 25,138,270 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.13103,267,365 - 103,268,238 (+)NCBI
Celera1718,442,710 - 18,844,739 (+)NCBI
Cytogenetic Map17p14NCBImapview
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Atxn1
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
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RGD Object Information
RGD ID: 3624
Created: 2000-05-25
Species: Rattus norvegicus
Last Modified: 2017-07-11
Status: ACTIVE