Gigyf2 (GRB10 interacting GYF protein 2) - Rat Genome Database

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Gene: Gigyf2 (GRB10 interacting GYF protein 2) Rattus norvegicus
Analyze
Symbol: Gigyf2
Name: GRB10 interacting GYF protein 2
RGD ID: 2318130
Description: Predicted to enable molecular adaptor activity and proline-rich region binding activity. Predicted to be involved in negative regulation of type I interferon-mediated signaling pathway; post-transcriptional regulation of gene expression; and rescue of stalled ribosome. Predicted to act upstream of or within several processes, including insulin-like growth factor receptor signaling pathway; mitotic G1 DNA damage checkpoint signaling; and spinal cord motor neuron differentiation. Predicted to be located in several cellular components, including cytoplasmic stress granule; perikaryon; and proximal dendrite. Predicted to be part of protein-containing complex. Human ortholog(s) of this gene implicated in Parkinson's disease. Orthologous to human GIGYF2 (GRB10 interacting GYF protein 2); INTERACTS WITH 17beta-estradiol; bisphenol A; Cuprizon.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: GRB10-interacting GYF protein 2; LOC100362458; PERQ amino acid-rich with GYF domain-containing protein 2; rCG23949-like
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8995,449,143 - 95,574,927 (+)NCBIGRCr8
mRatBN7.2988,001,212 - 88,127,040 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl988,001,301 - 88,125,715 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.0994,425,191 - 94,550,431 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl994,425,252 - 94,550,431 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0994,147,532 - 94,271,874 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4986,143,324 - 86,273,766 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera985,413,515 - 85,537,641 (+)NCBICelera
Cytogenetic Map9q35NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
3. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:12477932   PMID:19744960   PMID:19946888   PMID:20670374   PMID:20696395   PMID:20878056   PMID:22681889   PMID:22751931   PMID:25468996   PMID:25931508   PMID:27157137   PMID:31505169  


Genomics

Comparative Map Data
Gigyf2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8995,449,143 - 95,574,927 (+)NCBIGRCr8
mRatBN7.2988,001,212 - 88,127,040 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl988,001,301 - 88,125,715 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.0994,425,191 - 94,550,431 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl994,425,252 - 94,550,431 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0994,147,532 - 94,271,874 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4986,143,324 - 86,273,766 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera985,413,515 - 85,537,641 (+)NCBICelera
Cytogenetic Map9q35NCBI
GIGYF2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382232,697,331 - 232,860,605 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2232,697,299 - 232,860,605 (+)EnsemblGRCh38hg38GRCh38
GRCh372233,562,041 - 233,725,315 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362233,270,259 - 233,433,531 (+)NCBINCBI36Build 36hg18NCBI36
Build 342233,387,545 - 233,548,823NCBI
Celera2227,326,329 - 227,489,565 (+)NCBICelera
Cytogenetic Map2q37.1NCBI
HuRef2225,411,824 - 225,574,153 (+)NCBIHuRef
CHM1_12233,568,065 - 233,731,215 (+)NCBICHM1_1
T2T-CHM13v2.02233,184,093 - 233,347,291 (+)NCBIT2T-CHM13v2.0
Gigyf2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39187,254,653 - 87,378,532 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl187,254,720 - 87,378,518 (+)EnsemblGRCm39 Ensembl
GRCm38187,326,931 - 87,450,810 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl187,326,998 - 87,450,796 (+)EnsemblGRCm38mm10GRCm38
MGSCv37189,223,573 - 89,347,385 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36189,158,224 - 89,280,317 (+)NCBIMGSCv36mm8
Celera190,299,913 - 90,423,771 (+)NCBICelera
Cytogenetic Map1C5- DNCBI
cM Map144.23NCBI
Gigyf2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554533,203,358 - 3,301,547 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554533,201,593 - 3,301,541 (-)NCBIChiLan1.0ChiLan1.0
GIGYF2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v213135,302,832 - 135,463,407 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12B135,317,797 - 135,478,361 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02B119,929,004 - 120,090,367 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12B238,847,672 - 239,007,549 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B238,847,674 - 239,007,549 (+)Ensemblpanpan1.1panPan2
GIGYF2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12544,317,540 - 44,453,761 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2544,317,517 - 44,452,064 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2544,811,903 - 44,946,988 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02544,574,874 - 44,710,420 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2544,574,889 - 44,711,161 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12544,500,477 - 44,635,614 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02544,346,429 - 44,481,645 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02544,501,459 - 44,636,914 (+)NCBIUU_Cfam_GSD_1.0
Gigyf2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303186,507,566 - 186,638,709 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365254,304,629 - 4,403,089 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365254,301,003 - 4,432,125 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GIGYF2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl15133,260,113 - 133,311,887 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.115133,180,638 - 133,313,307 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.215147,145,280 - 147,196,338 (-)NCBISscrofa10.2Sscrofa10.2susScr3
GIGYF2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.110118,720,668 - 118,883,299 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl10118,720,690 - 118,874,162 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604080,622,421 - 80,786,763 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Gigyf2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248435,420,352 - 5,537,217 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248435,391,725 - 5,538,980 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Gigyf2
479 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:32
Count of miRNA genes:29
Interacting mature miRNAs:32
Transcripts:ENSRNOT00000029749
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
724544Uae9Urinary albumin excretion QTL 94.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)925268044114175309Rat
731164Uae25Urinary albumin excretion QTL 253.50.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)925661188100929786Rat
8662828Vetf6Vascular elastic tissue fragility QTL 63.9artery integrity trait (VT:0010639)patent ductus arteriosus score (CMO:0002566)93696235992058970Rat
2290450Scl57Serum cholesterol level QTL 574.15blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)93696235995410867Rat
11353951Bp394Blood pressure QTL 394arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)94464992189649921Rat
12879506Pur33Proteinuria QTL 33urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)94464992189649921Rat
11353957Bmd92Bone mineral density QTL 920.01tibia mineral mass (VT:1000283)volumetric bone mineral density (CMO:0001553)94611419991114199Rat
631656Bp108Blood pressure QTL 1085.970.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)94859825193598251Rat
1578760Cm53Cardiac mass QTL 533.30.0001heart mass (VT:0007028)heart wet weight (CMO:0000069)956771635101771635Rat
724515Uae16Urinary albumin excretion QTL 168urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)958163035100929646Rat
1300134Bp185Blood pressure QTL 1853.73arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)961381434104821652Rat
1581580Uae34Urinary albumin excretion QTL 34urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)96207227596470995Rat
1578757Pur6Proteinuria QTL 63.30.005urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)96207227596470995Rat
61385Edpm9Estrogen-dependent pituitary mass QTL 93.430.05pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)963869687108869687Rat
731171Glom6Glomerulus QTL 62.80.0003kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)964573531109573531Rat
1354626Bvd1Brain ventricular dilatation QTL 13.730.001brain ventricle morphology trait (VT:0000822)hydrocephalus severity score (CMO:0001881)975712843111552878Rat
4889852Pur26Proteinuria QTL 26150.001urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)977813894101597663Rat
7794784Mcs31Mammary carcinoma susceptibility QTL 312.98mammary gland integrity trait (VT:0010552)mammary tumor incidence/prevalence measurement (CMO:0000946)977813894111552878Rat
2303178Bp334Blood pressure QTL 3343.70.01arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)97927151191616855Rat
2303178Bp334Blood pressure QTL 3343.70.01arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)97927151191616855Rat
2303178Bp334Blood pressure QTL 3343.70.01arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)97927151191616855Rat
724547Cm21Cardiac mass QTL 212.7heart mass (VT:0007028)calculated heart weight (CMO:0000073)979271511102910209Rat
4889943Bss90Bone structure and strength QTL 904.1tibia area (VT:1000281)tibia-fibula cortical bone endosteal cross-sectional area (CMO:0001722)98636963192058970Rat

Markers in Region
RH131801  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2988,032,645 - 88,032,836 (+)MAPPERmRatBN7.2
Rnor_6.0994,456,395 - 94,456,585NCBIRnor6.0
Rnor_5.0994,178,189 - 94,178,379UniSTSRnor5.0
RGSC_v3.4986,175,064 - 86,175,254UniSTSRGSC3.4
Celera985,443,547 - 85,443,737UniSTS
RH138626  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2988,118,364 - 88,118,591 (+)MAPPERmRatBN7.2
Rnor_6.0994,541,751 - 94,541,977NCBIRnor6.0
Rnor_5.0994,263,194 - 94,263,420UniSTSRnor5.0
RGSC_v3.4986,265,073 - 86,265,299UniSTSRGSC3.4
Celera985,528,961 - 85,529,187UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 3 27 40 24 19 24 1 1 74 35 41 11 1
Low 16 17 17 17 7 10 7
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001427666 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_003754543 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006226922 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006226923 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006226924 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008767333 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017603921 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017603922 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017603923 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039084707 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039084708 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039084710 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039084711 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039084713 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039084714 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039084718 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039084719 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063266508 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063266509 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063266510 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063266511 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063266512 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063266513 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063266514 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063266516 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide BC166750 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000009 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSRNOT00000064965   ⟹   ENSRNOP00000063708
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl988,001,301 - 88,066,300 (+)Ensembl
Rnor_6.0 Ensembl994,425,252 - 94,491,738 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000075967   ⟹   ENSRNOP00000068141
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl988,008,072 - 88,125,715 (+)Ensembl
Rnor_6.0 Ensembl994,525,925 - 94,550,431 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000076099   ⟹   ENSRNOP00000068457
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl988,001,301 - 88,121,733 (+)Ensembl
Rnor_6.0 Ensembl994,425,256 - 94,525,152 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000112661   ⟹   ENSRNOP00000086016
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl988,039,301 - 88,057,419 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000120312   ⟹   ENSRNOP00000080015
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl988,008,072 - 88,125,715 (+)Ensembl
RefSeq Acc Id: NM_001427666   ⟹   NP_001414595
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8995,449,179 - 95,574,927 (+)NCBI
RefSeq Acc Id: XM_039084707   ⟹   XP_038940635
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8995,449,143 - 95,573,357 (+)NCBI
mRatBN7.2988,001,266 - 88,127,040 (+)NCBI
RefSeq Acc Id: XM_039084708   ⟹   XP_038940636
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8995,449,146 - 95,573,357 (+)NCBI
mRatBN7.2988,001,212 - 88,127,040 (+)NCBI
RefSeq Acc Id: XM_039084710   ⟹   XP_038940638
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8995,488,852 - 95,573,357 (+)NCBI
mRatBN7.2988,040,978 - 88,127,040 (+)NCBI
RefSeq Acc Id: XM_039084711   ⟹   XP_038940639
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8995,498,345 - 95,573,357 (+)NCBI
mRatBN7.2988,041,054 - 88,127,040 (+)NCBI
RefSeq Acc Id: XM_039084713   ⟹   XP_038940641
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8995,529,665 - 95,573,357 (+)NCBI
mRatBN7.2988,081,792 - 88,127,040 (+)NCBI
RefSeq Acc Id: XM_039084714   ⟹   XP_038940642
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8995,529,660 - 95,573,357 (+)NCBI
mRatBN7.2988,081,787 - 88,127,040 (+)NCBI
RefSeq Acc Id: XM_039084718   ⟹   XP_038940646
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8995,529,677 - 95,573,357 (+)NCBI
mRatBN7.2988,081,802 - 88,127,040 (+)NCBI
RefSeq Acc Id: XM_039084719   ⟹   XP_038940647
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8995,529,863 - 95,573,357 (+)NCBI
mRatBN7.2988,081,990 - 88,127,040 (+)NCBI
RefSeq Acc Id: XM_063266508   ⟹   XP_063122578
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8995,449,601 - 95,573,357 (+)NCBI
RefSeq Acc Id: XM_063266509   ⟹   XP_063122579
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8995,449,153 - 95,573,357 (+)NCBI
RefSeq Acc Id: XM_063266510   ⟹   XP_063122580
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8995,449,143 - 95,573,357 (+)NCBI
RefSeq Acc Id: XM_063266511   ⟹   XP_063122581
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8995,449,148 - 95,573,357 (+)NCBI
RefSeq Acc Id: XM_063266512   ⟹   XP_063122582
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8995,449,179 - 95,573,357 (+)NCBI
RefSeq Acc Id: XM_063266513   ⟹   XP_063122583
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8995,449,148 - 95,573,357 (+)NCBI
RefSeq Acc Id: XM_063266514   ⟹   XP_063122584
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8995,449,179 - 95,573,357 (+)NCBI
RefSeq Acc Id: XM_063266516   ⟹   XP_063122586
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8995,449,146 - 95,569,383 (+)NCBI
Reference Protein Sequences
RefSeq Acc Id: ENSRNOP00000068141   ⟸   ENSRNOT00000075967
RefSeq Acc Id: ENSRNOP00000063708   ⟸   ENSRNOT00000064965
RefSeq Acc Id: ENSRNOP00000068457   ⟸   ENSRNOT00000076099
RefSeq Acc Id: XP_038940636   ⟸   XM_039084708
- Peptide Label: isoform X2
- UniProtKB: A6JWM3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038940635   ⟸   XM_039084707
- Peptide Label: isoform X1
- UniProtKB: A0A8I5ZS67 (UniProtKB/TrEMBL),   A6JWM3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038940638   ⟸   XM_039084710
- Peptide Label: isoform X5
- UniProtKB: A6JWM6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038940639   ⟸   XM_039084711
- Peptide Label: isoform X6
- UniProtKB: A6JWM7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038940642   ⟸   XM_039084714
- Peptide Label: isoform X9
- UniProtKB: A6JWM7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038940641   ⟸   XM_039084713
- Peptide Label: isoform X8
- UniProtKB: A6JWM7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038940646   ⟸   XM_039084718
- Peptide Label: isoform X10
- UniProtKB: A6JWM7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038940647   ⟸   XM_039084719
- Peptide Label: isoform X10
- UniProtKB: A6JWM7 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSRNOP00000086016   ⟸   ENSRNOT00000112661
RefSeq Acc Id: ENSRNOP00000080015   ⟸   ENSRNOT00000120312
RefSeq Acc Id: XP_063122580   ⟸   XM_063266510
- Peptide Label: isoform X2
RefSeq Acc Id: XP_063122586   ⟸   XM_063266516
- Peptide Label: isoform X7
RefSeq Acc Id: XP_063122581   ⟸   XM_063266511
- Peptide Label: isoform X3
RefSeq Acc Id: XP_063122583   ⟸   XM_063266513
- Peptide Label: isoform X4
- UniProtKB: A0A096MJI4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063122579   ⟸   XM_063266509
- Peptide Label: isoform X1
- UniProtKB: A0A8I5ZS67 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001414595   ⟸   NM_001427666
- UniProtKB: A0A8I5ZS67 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063122582   ⟸   XM_063266512
- Peptide Label: isoform X3
RefSeq Acc Id: XP_063122584   ⟸   XM_063266514
- Peptide Label: isoform X4
- UniProtKB: A0A096MJI4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063122578   ⟸   XM_063266508
- Peptide Label: isoform X1
- UniProtKB: A0A8I5ZS67 (UniProtKB/TrEMBL)
Protein Domains
GYF

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-B2RYE6-F1-model_v2 AlphaFold B2RYE6 1-185 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:2318130 AgrOrtholog
BioCyc Gene G2FUF-26844 BioCyc
Ensembl Genes ENSRNOG00000023577 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000064965.5 UniProtKB/TrEMBL
  ENSRNOT00000075967.2 UniProtKB/TrEMBL
  ENSRNOT00000076099.2 UniProtKB/TrEMBL
  ENSRNOT00000112661.1 UniProtKB/TrEMBL
  ENSRNOT00000120312.1 UniProtKB/TrEMBL
Gene3D-CATH 3.30.1490.40 UniProtKB/TrEMBL
InterPro GYF UniProtKB/TrEMBL
  GYF-like_dom_sf UniProtKB/TrEMBL
NCBI Gene 100362458 ENTREZGENE
PANTHER GRB10 INTERACTING GYF PROTEIN UniProtKB/TrEMBL
  GRB10-INTERACTING GYF PROTEIN 2 UniProtKB/TrEMBL
Pfam GYF UniProtKB/TrEMBL
PhenoGen Gigyf2 PhenoGen
PROSITE GYF UniProtKB/TrEMBL
RatGTEx ENSRNOG00000023577 RatGTEx
SMART GYF UniProtKB/TrEMBL
Superfamily-SCOP SSF55277 UniProtKB/TrEMBL
UniProt A0A096MJI4 ENTREZGENE, UniProtKB/TrEMBL
  A0A096MKC0_RAT UniProtKB/TrEMBL
  A0A8I5ZS67 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6A2R6_RAT UniProtKB/TrEMBL
  A6JWM3 ENTREZGENE, UniProtKB/TrEMBL
  A6JWM6 ENTREZGENE, UniProtKB/TrEMBL
  A6JWM7 ENTREZGENE, UniProtKB/TrEMBL
  F7F795_RAT UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2013-08-07 Gigyf2  GRB10 interacting GYF protein 2  LOC100362458  rCG23949-like  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2010-05-05 LOC100362458  rCG23949-like      Symbol and Name status set to provisional 70820 PROVISIONAL