Zmym2 (zinc finger MYM-type containing 2) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Gene: Zmym2 (zinc finger MYM-type containing 2) Rattus norvegicus
Analyze
Symbol: Zmym2
Name: zinc finger MYM-type containing 2
RGD ID: 1593255
Description: Predicted to enable ubiquitin conjugating enzyme binding activity. Predicted to be involved in negative regulation of DNA-templated transcription. Predicted to be located in PML body. Orthologous to human ZMYM2 (zinc finger MYM-type containing 2); INTERACTS WITH 1-naphthyl isothiocyanate; bisphenol A; oxaliplatin.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC305913; similar to zinc finger protein 198; zinc finger MYM-type protein 2; zinc finger, MYM-type 2
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81535,151,356 - 35,224,528 (+)NCBIGRCr8
mRatBN7.21531,035,835 - 31,108,945 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1531,035,838 - 31,109,357 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1533,027,157 - 33,100,260 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01534,177,816 - 34,250,918 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01532,435,931 - 32,509,046 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01537,156,250 - 37,229,803 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1537,171,052 - 37,227,301 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01541,005,975 - 41,077,786 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41535,905,999 - 35,979,468 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1530,749,125 - 30,821,442 (+)NCBICelera
Cytogenetic Map15p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
nucleus  (ISO)
PML body  (ISO)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. GOA pipeline RGD automated data pipeline
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:12477932   PMID:12776193   PMID:17027752  


Genomics

Comparative Map Data
Zmym2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81535,151,356 - 35,224,528 (+)NCBIGRCr8
mRatBN7.21531,035,835 - 31,108,945 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1531,035,838 - 31,109,357 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1533,027,157 - 33,100,260 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01534,177,816 - 34,250,918 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01532,435,931 - 32,509,046 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01537,156,250 - 37,229,803 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1537,171,052 - 37,227,301 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01541,005,975 - 41,077,786 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41535,905,999 - 35,979,468 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1530,749,125 - 30,821,442 (+)NCBICelera
Cytogenetic Map15p12NCBI
ZMYM2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381319,863,840 - 20,089,115 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1319,958,677 - 20,091,829 (+)EnsemblGRCh38hg38GRCh38
GRCh371320,531,563 - 20,663,255 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361319,430,810 - 19,558,939 (+)NCBINCBI36Build 36hg18NCBI36
Build 341319,430,809 - 19,558,939NCBI
Celera131,594,586 - 1,727,769 (+)NCBICelera
Cytogenetic Map13q12.11NCBI
HuRef131,338,026 - 1,471,218 (+)NCBIHuRef
CHM1_11320,501,301 - 20,634,502 (+)NCBICHM1_1
T2T-CHM13v2.01319,153,836 - 19,285,569 (+)NCBIT2T-CHM13v2.0
Zmym2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391457,123,986 - 57,199,815 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1457,124,110 - 57,200,158 (+)EnsemblGRCm39 Ensembl
GRCm381456,886,529 - 56,962,358 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1456,886,653 - 56,962,701 (+)EnsemblGRCm38mm10GRCm38
MGSCv371457,506,631 - 57,579,186 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361455,841,904 - 55,914,459 (+)NCBIMGSCv36mm8
Celera1454,685,017 - 54,757,577 (+)NCBICelera
Cytogenetic Map14C3NCBI
cM Map1428.99NCBI
Zmym2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955497778,154 - 897,680 (+)EnsemblChiLan1.0
ChiLan1.0NW_004955497778,641 - 895,376 (+)NCBIChiLan1.0ChiLan1.0
ZMYM2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21419,584,393 - 19,713,442 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11310,696,624 - 10,825,878 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0131,281,220 - 1,411,390 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11319,597,963 - 19,727,913 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1319,599,221 - 19,727,913 (+)Ensemblpanpan1.1panPan2
ZMYM2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12518,040,081 - 18,158,241 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2518,050,995 - 18,156,980 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2518,068,483 - 18,157,491 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02518,175,789 - 18,265,051 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2518,189,396 - 18,296,279 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12518,042,059 - 18,131,148 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02518,053,838 - 18,142,874 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02518,110,597 - 18,199,856 (-)NCBIUU_Cfam_GSD_1.0
Zmym2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404945120,090,686 - 120,178,499 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367201,643,710 - 1,724,943 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049367201,643,711 - 1,726,124 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ZMYM2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl11661,351 - 731,029 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.111661,314 - 731,030 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
ZMYM2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.13890,747 - 1,018,558 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl3893,857 - 1,017,283 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605743,563,986 - 43,693,782 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Zmym2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462477617,631,511 - 17,744,153 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Zmym2
209 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:234
Count of miRNA genes:152
Interacting mature miRNAs:187
Transcripts:ENSRNOT00000011684, ENSRNOT00000071443
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
8552920Pigfal8Plasma insulin-like growth factor 1 level QTL 83blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)15134723002Rat
8694361Abfw6Abdominal fat weight QTL 610.20.001visceral adipose mass (VT:0010063)abdominal fat pad weight to body weight ratio (CMO:0000095)15134723002Rat
9589149Insul29Insulin level QTL 299.060.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)15134723002Rat
731170Pur3Proteinuria QTL 32.30.0005urine protein amount (VT:0005160)urine protein excretion rate (CMO:0000759)15141686771Rat
1641887Alcrsp14Alcohol response QTL 14response to alcohol trait (VT:0010489)brain neurotensin receptor 1 density (CMO:0002068)15142356671Rat
2298549Neuinf12Neuroinflammation QTL 123.5nervous system integrity trait (VT:0010566)spinal cord beta-2 microglobulin mRNA level (CMO:0002125)15155302115Rat
10401805Kidm51Kidney mass QTL 51kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)1530632945306329Rat
738017Hcas7Hepatocarcinoma susceptibility QTL 72.91liver integrity trait (VT:0010547)liver nonremodeling tumorous lesion volume to total liver volume ratio (CMO:0001464)15226636846921453Rat
1582251Gluco24Glucose level QTL 243.20.0008blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)15553075650530756Rat
631273Lecl2Lens clarity QTL 20.001lens clarity trait (VT:0001304)age of onset/diagnosis of cataract (CMO:0001584)151059608955596089Rat
2300167Bmd63Bone mineral density QTL 635.90.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)151111114256111142Rat
2300173Bmd62Bone mineral density QTL 6212.80.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)151111114256111142Rat
2293688Bss29Bone structure and strength QTL 295.310.0001femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)151111114256111142Rat
2317750Glom26Glomerulus QTL 264.3urine protein amount (VT:0005160)urine protein level (CMO:0000591)151249614165205939Rat
61424Scl1Serum cholesterol level QTL 17.70.001blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)151672552880672115Rat
1331729Rf42Renal function QTL 423.071kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)151736289773690657Rat
631550Bw7Body weight QTL 73.6body mass (VT:0001259)body weight (CMO:0000012)151985656634924750Rat
2324620Coatc3Coat color QTL 3coat/hair pigmentation trait (VT:0010463)pigmented coat/hair area to total coat/hair area ratio (CMO:0001810)151985656646187442Rat
10054130Srcrt8Stress Responsive Cort QTL 82.180.0085blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)152211793367117933Rat
1578646Bmd18Bone mineral density QTL 185.2femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)152280624098288169Rat
1578647Bmd17Bone mineral density QTL 174femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)152280624098288169Rat
1578660Bss19Bone structure and strength QTL 194.3femur morphology trait (VT:0000559)bone trabecular cross-sectional area (CMO:0002311)152280624098288169Rat
1582214Stl21Serum triglyceride level QTL 213.10.022blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)152803066582262678Rat
1582227Gluco30Glucose level QTL 303.60.0003blood glucose amount (VT:0000188)absolute change in blood glucose level area under curve (CMO:0002034)152803066582262678Rat
1582228Epfw3Epididymal fat weight QTL 34.10.0002epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)152803066582262678Rat
1582242Gluco28Glucose level QTL 283.30.0008blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)152803066582262678Rat
1582244Bw79Body weight QTL 7940.0002epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)152803066582262678Rat

Markers in Region
BF404543  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21531,069,221 - 31,069,407 (+)MAPPERmRatBN7.2
Rnor_6.01537,190,159 - 37,190,344NCBIRnor6.0
Rnor_5.01541,039,829 - 41,040,014UniSTSRnor5.0
RGSC_v3.41535,940,178 - 35,940,363UniSTSRGSC3.4
Celera1530,781,782 - 30,781,967UniSTS
RH 3.4 Map15214.8UniSTS
Cytogenetic Map15p12UniSTS
RH142603  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21531,034,510 - 31,034,626 (+)MAPPERmRatBN7.2
Rnor_6.01537,154,959 - 37,155,074NCBIRnor6.0
Rnor_5.01541,005,152 - 41,005,267UniSTSRnor5.0
RGSC_v3.41535,905,468 - 35,905,583UniSTSRGSC3.4
Celera1530,747,234 - 30,747,349UniSTS
RH 3.4 Map15215.2UniSTS
Cytogenetic Map15p12UniSTS
BE107111  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21531,108,461 - 31,108,613 (+)MAPPERmRatBN7.2
Rnor_6.01537,229,320 - 37,229,471NCBIRnor6.0
Rnor_5.01541,077,348 - 41,077,499UniSTSRnor5.0
RGSC_v3.41535,979,605 - 35,979,756UniSTSRGSC3.4
Celera1530,820,959 - 30,821,110UniSTS
Cytogenetic Map15p12UniSTS
RH141262  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21531,108,592 - 31,108,812 (+)MAPPERmRatBN7.2
Rnor_6.01537,229,451 - 37,229,670NCBIRnor6.0
Rnor_5.01541,077,479 - 41,077,698UniSTSRnor5.0
RGSC_v3.41535,979,736 - 35,979,955UniSTSRGSC3.4
Celera1530,821,090 - 30,821,309UniSTS
Cytogenetic Map15p12UniSTS
AU049628  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21531,095,355 - 31,095,486 (+)MAPPERmRatBN7.2
Rnor_6.01537,216,209 - 37,216,339NCBIRnor6.0
Rnor_5.01541,064,816 - 41,064,946UniSTSRnor5.0
RGSC_v3.41535,966,602 - 35,966,732UniSTSRGSC3.4
Celera1530,807,853 - 30,807,983UniSTS
Cytogenetic Map15p12UniSTS
UniSTS:237193  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21531,106,788 - 31,107,128 (+)MAPPERmRatBN7.2
Rnor_6.01537,227,647 - 37,227,986NCBIRnor6.0
Rnor_5.01541,075,675 - 41,076,014UniSTSRnor5.0
RGSC_v3.41535,977,932 - 35,978,271UniSTSRGSC3.4
Celera1530,819,286 - 30,819,625UniSTS
Cytogenetic Map15p12UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 3 40 48 32 19 32 8 8 74 35 40 11 8
Low 3 9 9 9 3 1
Below cutoff

Sequence


Reference Sequences
RefSeq Acc Id: ENSRNOT00000011684   ⟹   ENSRNOP00000011684
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1531,035,838 - 31,108,894 (+)Ensembl
Rnor_6.0 Ensembl1537,171,052 - 37,227,301 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000109069   ⟹   ENSRNOP00000090897
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1531,050,621 - 31,109,357 (+)Ensembl
RefSeq Acc Id: NM_001399496   ⟹   NP_001386425
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81535,151,430 - 35,224,528 (+)NCBI
mRatBN7.21531,035,835 - 31,108,945 (+)NCBI
RefSeq Acc Id: XM_039093864   ⟹   XP_038949792
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81535,151,541 - 35,222,681 (+)NCBI
mRatBN7.21531,036,046 - 31,108,898 (+)NCBI
RefSeq Acc Id: XM_039093866   ⟹   XP_038949794
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81535,151,641 - 35,222,681 (+)NCBI
mRatBN7.21531,036,046 - 31,108,945 (+)NCBI
RefSeq Acc Id: XM_039093867   ⟹   XP_038949795
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81535,151,641 - 35,222,681 (+)NCBI
mRatBN7.21531,036,046 - 31,108,241 (+)NCBI
RefSeq Acc Id: XM_063274263   ⟹   XP_063130333
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81535,151,385 - 35,222,681 (+)NCBI
RefSeq Acc Id: XM_063274264   ⟹   XP_063130334
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81535,151,516 - 35,222,681 (+)NCBI
RefSeq Acc Id: XM_063274265   ⟹   XP_063130335
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81535,151,356 - 35,222,681 (+)NCBI
Reference Protein Sequences
RefSeq Acc Id: ENSRNOP00000011684   ⟸   ENSRNOT00000011684
RefSeq Acc Id: XP_038949794   ⟸   XM_039093866
- Peptide Label: isoform X2
- UniProtKB: A0A8I6AEP0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038949792   ⟸   XM_039093864
- Peptide Label: isoform X1
- UniProtKB: A0A8I6AEP0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038949795   ⟸   XM_039093867
- Peptide Label: isoform X3
- UniProtKB: A0A8I6AEP0 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSRNOP00000090897   ⟸   ENSRNOT00000109069
RefSeq Acc Id: NP_001386425   ⟸   NM_001399496
RefSeq Acc Id: XP_063130335   ⟸   XM_063274265
- Peptide Label: isoform X3
RefSeq Acc Id: XP_063130333   ⟸   XM_063274263
- Peptide Label: isoform X1
RefSeq Acc Id: XP_063130334   ⟸   XM_063274264
- Peptide Label: isoform X1
Protein Domains
TRASH

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D4A3R6-F1-model_v2 AlphaFold D4A3R6 1-1382 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1593255 AgrOrtholog
BioCyc Gene G2FUF-13614 BioCyc
Ensembl Genes ENSRNOG00000008734 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000011684.9 UniProtKB/TrEMBL
  ENSRNOT00000109069 ENTREZGENE
  ENSRNOT00000109069.1 UniProtKB/TrEMBL
InterPro DUF3504 UniProtKB/TrEMBL
  TRASH_dom UniProtKB/TrEMBL
  Znf_MYM UniProtKB/TrEMBL
NCBI Gene 305913 ENTREZGENE
PANTHER ZINC FINGER MYM-TYPE PROTEIN UniProtKB/TrEMBL
  ZINC FINGER MYM-TYPE PROTEIN 2 UniProtKB/TrEMBL
Pfam DUF3504 UniProtKB/TrEMBL
  zf-FCS UniProtKB/TrEMBL
PhenoGen Zmym2 PhenoGen
RatGTEx ENSRNOG00000008734 RatGTEx
SMART TRASH UniProtKB/TrEMBL
Superfamily-SCOP Glucocorticoid receptor-like (DNA-binding domain) UniProtKB/TrEMBL
UniProt A0A8I6AEP0 ENTREZGENE, UniProtKB/TrEMBL
  D4A3R6_RAT UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-02-19 Zmym2  zinc finger MYM-type containing 2  Zmym2  zinc finger, MYM-type 2  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-03-04 Zmym2  zinc finger, MYM-type 2  LOC305913  similar to zinc finger protein 198  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-11-20 LOC305913  similar to zinc finger protein 198      Symbol and Name status set to provisional 70820 PROVISIONAL