Lilrb3 (leukocyte immunoglobulin like receptor B3) - Rat Genome Database

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Gene: Lilrb3 (leukocyte immunoglobulin like receptor B3) Rattus norvegicus
Analyze
Symbol: Lilrb3
Name: leukocyte immunoglobulin like receptor B3
RGD ID: 1566307
Description: Predicted to enable inhibitory MHC class I receptor activity. Predicted to be involved in cytokine-mediated signaling pathway. Predicted to be active in plasma membrane. Orthologous to several human genes including LILRB4 (leukocyte immunoglobulin like receptor B4); INTERACTS WITH 17beta-estradiol (ortholog); 2-palmitoylglycerol (ortholog); 3,3',4,4',5-pentachlorobiphenyl (ortholog).
Type: protein-coding
RefSeq Status: MODEL
Previously known as: leukocyte immunoglobulin-like receptor subfamily A member 6; leukocyte immunoglobulin-like receptor subfamily B member 3; leukocyte immunoglobulin-like receptor subfamily B member 3A; leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3; LOC308350; RGD1566307; similar to PIRB1
RGD Orthologs
Human
Bonobo
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8179,001,483 - 79,011,054 (-)NCBIGRCr8
mRatBN7.2169,928,948 - 69,939,461 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl169,928,945 - 69,939,048 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.0173,609,570 - 73,619,568 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl173,610,149 - 73,619,356 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0174,926,481 - 74,936,423 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4169,340,386 - 69,348,030 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera167,182,478 - 67,192,389 (+)NCBICelera
Cytogenetic Map1q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:18802077   PMID:24052308  


Genomics

Comparative Map Data
Lilrb3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8179,001,483 - 79,011,054 (-)NCBIGRCr8
mRatBN7.2169,928,948 - 69,939,461 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl169,928,945 - 69,939,048 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.0173,609,570 - 73,619,568 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl173,610,149 - 73,619,356 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0174,926,481 - 74,936,423 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4169,340,386 - 69,348,030 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera167,182,478 - 67,192,389 (+)NCBICelera
Cytogenetic Map1q21NCBI
LILRB5
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381954,249,421 - 54,257,273 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1954,249,421 - 54,257,301 (-)EnsemblGRCh38hg38GRCh38
GRCh371954,753,279 - 54,761,136 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361959,446,082 - 59,452,979 (-)NCBINCBI36Build 36hg18NCBI36
Build 341959,446,217 - 59,452,937NCBI
Celera1951,794,937 - 51,801,834 (-)NCBICelera
Cytogenetic Map19q13.42NCBI
HuRef1951,081,906 - 51,088,803 (-)NCBIHuRef
CHM1_11954,755,425 - 54,762,323 (-)NCBICHM1_1
T2T-CHM13v2.01957,331,818 - 57,339,670 (-)NCBIT2T-CHM13v2.0
LILRB5
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22060,264,102 - 60,270,806 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11962,185,536 - 62,191,861 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01951,189,520 - 51,211,511 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11960,031,057 - 60,092,581 (-)NCBIpanpan1.1PanPan1.1panPan2
PIGE-108A11.3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1659,042,881 - 59,046,646 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2653,966,606 - 53,970,152 (+)NCBISscrofa10.2Sscrofa10.2susScr3
LOC103235252
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1646,934,386 - 46,940,826 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366607327,048,899 - 27,056,301 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0

Variants

.
Variants in Lilrb3
63 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:118
Count of miRNA genes:92
Interacting mature miRNAs:97
Transcripts:ENSRNOT00000015054, ENSRNOT00000074352
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1554320Bmd1Bone mineral density QTL 112.20.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)150910886060548Rat
631688Hcas2Hepatocarcinoma susceptibility QTL 230.0001liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)15925874115540829Rat
1300167Hrtrt2Heart rate QTL 24.35heart pumping trait (VT:2000009)heart rate (CMO:0000002)11148131275088344Rat
2313062Bmd73Bone mineral density QTL 733.90.0001tibia mineral mass (VT:1000283)compact volumetric bone mineral density (CMO:0001730)11148131282174945Rat
2313065Bss67Bone structure and strength QTL 673.10.0001tibia area (VT:1000281)tibia total energy absorbed before break (CMO:0001736)11148131282174945Rat
2313069Bss68Bone structure and strength QTL 682.90.0001tibia size trait (VT:0100001)tibia total energy absorbed before break (CMO:0001736)11148131282174945Rat
2313075Bss66Bone structure and strength QTL 663.40.0001tibia length (VT:0004357)tibia length (CMO:0000450)11148131282174945Rat
2313077Bss69Bone structure and strength QTL 693.50.0001tibia strength trait (VT:1000284)bone polar moment of inertia (CMO:0001558)11148131282174945Rat
2313092Bmd72Bone mineral density QTL 722.50.0001tibia mineral mass (VT:1000283)total volumetric bone mineral density (CMO:0001728)11148131282174945Rat
2313097Bss70Bone structure and strength QTL 703.50.0001tibia strength trait (VT:1000284)tibia total energy absorbed before break (CMO:0001736)11148131282174945Rat
631495Bp96Blood pressure QTL 964.52arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)122340647102268831Rat
1331785Rf27Renal function QTL 274.643urine sodium amount (VT:0006274)urine sodium level (CMO:0000129)12887978078430678Rat
1358359Sradr1Stress Responsive Adrenal Weight QTL 14.74adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)130882023123479925Rat
70225Bp58Blood pressure QTL 583.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)132356093162846471Rat
1300172Bp172Blood pressure QTL 1723.56arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)13273727390665040Rat
10059597Bp377Blood pressure QTL 3773.420.025arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)132737458199368955Rat
1354599Bw29Body weight QTL 293.460.001body mass (VT:0001259)body weight (CMO:0000012)13344984878449848Rat
1354643Foco2Food consumption QTL 27.170.0001eating behavior trait (VT:0001431)food intake rate (CMO:0000427)13344984878449848Rat
8552900Pigfal1Plasma insulin-like growth factor 1 level QTL 17.4blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)13483685879836858Rat
8552948Pigfal11Plasma insulin-like growth factor 1 level QTL 114.7blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)13483685879836858Rat
9589820Insglur3Insulin/glucose ratio QTL 310.750.001blood insulin amount (VT:0001560)calculated plasma insulin level (CMO:0002170)13483685879836858Rat
1331732Srn4Serum renin concentration QTL 44.467renin activity (VT:0005581)plasma renin activity level (CMO:0000116)13523959878430678Rat
1331792Rf29Renal function QTL 294.589urine potassium amount (VT:0010539)urine potassium level (CMO:0000128)13523959878430678Rat
2313051Bss57Bone structure and strength QTL 573.70.0001tibia strength trait (VT:1000284)bone polar moment of inertia (CMO:0001558)143284731118944897Rat
2313059Bss55Bone structure and strength QTL 553.20.0001tibia size trait (VT:0100001)tibia midshaft cross-sectional area (CMO:0001717)143284731118944897Rat
2313072Bss53Bone structure and strength QTL 534.30.0001tibia length (VT:0004357)tibia length (CMO:0000450)143284731118944897Rat
2313078Bss54Bone structure and strength QTL 543.50.0001tibia area (VT:1000281)tibia midshaft cross-sectional area (CMO:0001717)143284731118944897Rat
2313094Bss58Bone structure and strength QTL 583.70.0001tibia strength trait (VT:1000284)tibia total energy absorbed before break (CMO:0001736)143284731118944897Rat
2313098Bmd70Bone mineral density QTL 703.60.0001tibia mineral mass (VT:1000283)compact volumetric bone mineral density (CMO:0001730)143284731118944897Rat
2313099Bss56Bone structure and strength QTL 562.40.0001tibia size trait (VT:0100001)tibia midshaft endosteal cross-sectional area (CMO:0001716)143284731118944897Rat
2302059Pia36Pristane induced arthritis QTL 363.80.001blood immunoglobulin amount (VT:0002460)serum immunoglobulin G1 level (CMO:0002115)14333300288333002Rat
1331778Rf28Renal function QTL 284.66urine potassium amount (VT:0010539)urine potassium excretion rate (CMO:0000761)14580314078430678Rat
2313402Anxrr24Anxiety related response QTL 24aggression-related behavior trait (VT:0015014)tameness/aggressiveness composite score (CMO:0002136)148963584144267916Rat
4889962Bss94Bone structure and strength QTL 943.8tibia area (VT:1000281)tibia-fibula cortical bone endosteal cross-sectional area (CMO:0001722)14936146582174945Rat
1578649Bmd8Bone mineral density QTL 84.9femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)14939317294393172Rat
1578654Bss10Bone structure and strength QTL 104femur morphology trait (VT:0000559)femoral neck cortical cross-sectional area (CMO:0001702)149393172159356837Rat
634314Niddm44Non-insulin dependent diabetes mellitus QTL 44blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)149393289199050459Rat
6903308Scl36Serum cholesterol QTL 3620.0125blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)15386304190532583Rat
4889919Bss86Bone structure and strength QTL 864.1tibia area (VT:1000281)tibia midshaft total cross-sectional area (CMO:0001715)15389511782174945Rat
4889929Bss87Bone structure and strength QTL 876.7tibia area (VT:1000281)tibia-fibula cortical bone endosteal cross-sectional area (CMO:0001722)15389511782174945Rat
61342Bp27Blood pressure QTL 273.40.0006arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)15673266898773277Rat
2300164Bmd44Bone mineral density QTL 445.40.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)156949932101949932Rat
2298545Neuinf8Neuroinflammation QTL 84.6nervous system integrity trait (VT:0010566)spinal cord beta-2 microglobulin mRNA level (CMO:0002125)157336763151090257Rat
1300121Hrtrt1Heart rate QTL 13.7heart pumping trait (VT:2000009)heart rate (CMO:0000002)165789093115540829Rat
7421628Bp361Blood pressure QTL 3610.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)166023617118608521Rat


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 37 23 19 23 7 5 1
Low 3 23 16 14 14 8 8 47 22 19 10 8
Below cutoff 12 3 17 6 13

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_001070618 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006223040 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006223043 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006223045 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006223046 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006223048 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006228228 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006228230 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006228231 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006228233 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006228234 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006228236 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017588977 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017588979 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017589981 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017589982 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039100647 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039100648 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039100649 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039100650 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039100651 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039100652 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039100653 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039100654 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039100655 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063277267 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063277274 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063277278 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063277290 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063277294 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063277297 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063277301 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001835392 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001835673 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005498676 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005498690 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005498692 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_342788 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_350144 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide CH474075 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  OP709922 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  OP709923 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  OP709924 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSRNOT00000074352   ⟹   ENSRNOP00000067366
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl169,928,945 - 69,939,048 (-)Ensembl
Rnor_6.0 Ensembl173,610,149 - 73,619,356 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000114401   ⟹   ENSRNOP00000093241
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl169,928,945 - 69,939,048 (-)Ensembl
RefSeq Acc Id: XM_006228233   ⟹   XP_006228295
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8179,001,483 - 79,011,054 (-)NCBI
mRatBN7.2169,928,948 - 69,939,457 (-)NCBI
Rnor_6.0173,609,570 - 73,619,566 (-)NCBI
Rnor_5.0174,926,481 - 74,936,423 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006228236   ⟹   XP_006228298
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8179,001,483 - 79,011,054 (-)NCBI
mRatBN7.2169,928,948 - 69,939,458 (-)NCBI
Rnor_6.0173,609,570 - 73,619,565 (-)NCBI
Rnor_5.0174,926,481 - 74,936,423 (+)NCBI
Sequence:
RefSeq Acc Id: XM_039100647   ⟹   XP_038956575
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8179,001,483 - 79,011,054 (-)NCBI
mRatBN7.2169,928,948 - 69,939,454 (-)NCBI
RefSeq Acc Id: XM_039100648   ⟹   XP_038956576
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8179,001,483 - 79,011,054 (-)NCBI
mRatBN7.2169,928,948 - 69,939,458 (-)NCBI
RefSeq Acc Id: XM_039100649   ⟹   XP_038956577
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8179,001,483 - 79,011,054 (-)NCBI
mRatBN7.2169,928,948 - 69,939,390 (-)NCBI
RefSeq Acc Id: XM_039100650   ⟹   XP_038956578
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8179,001,483 - 79,011,054 (-)NCBI
mRatBN7.2169,928,948 - 69,939,458 (-)NCBI
RefSeq Acc Id: XM_039100651   ⟹   XP_038956579
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8179,001,483 - 79,011,054 (-)NCBI
mRatBN7.2169,928,948 - 69,939,459 (-)NCBI
RefSeq Acc Id: XM_039100652   ⟹   XP_038956580
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8179,001,483 - 79,011,054 (-)NCBI
mRatBN7.2169,929,229 - 69,939,400 (-)NCBI
RefSeq Acc Id: XM_039100653   ⟹   XP_038956581
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8179,001,483 - 79,011,054 (-)NCBI
mRatBN7.2169,929,229 - 69,939,453 (-)NCBI
RefSeq Acc Id: XM_039100654   ⟹   XP_038956582
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8179,003,400 - 79,011,054 (-)NCBI
mRatBN7.2169,931,146 - 69,939,397 (-)NCBI
RefSeq Acc Id: XM_039100655   ⟹   XP_038956583
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8179,001,483 - 79,011,054 (-)NCBI
mRatBN7.2169,928,948 - 69,939,461 (-)NCBI
RefSeq Acc Id: XM_063277267   ⟹   XP_063133337
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8179,001,483 - 79,011,054 (-)NCBI
RefSeq Acc Id: XM_063277274   ⟹   XP_063133344
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8179,001,483 - 79,011,054 (-)NCBI
RefSeq Acc Id: XM_063277278   ⟹   XP_063133348
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8179,001,483 - 79,011,054 (-)NCBI
RefSeq Acc Id: XM_063277290   ⟹   XP_063133360
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8179,003,400 - 79,011,054 (-)NCBI
RefSeq Acc Id: XM_063277294   ⟹   XP_063133364
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8179,003,441 - 79,011,054 (-)NCBI
RefSeq Acc Id: XM_063277297   ⟹   XP_063133367
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8179,001,483 - 79,011,054 (-)NCBI
RefSeq Acc Id: XM_063277301   ⟹   XP_063133371
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8179,001,483 - 79,011,054 (-)NCBI
RefSeq Acc Id: XR_005498676
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8179,003,475 - 79,011,054 (-)NCBI
mRatBN7.2169,931,211 - 69,939,398 (-)NCBI
RefSeq Acc Id: XR_005498690
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8179,003,271 - 79,011,054 (-)NCBI
mRatBN7.2169,929,229 - 69,939,399 (-)NCBI
RefSeq Acc Id: XR_005498692
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8179,002,018 - 79,011,054 (-)NCBI
mRatBN7.2169,929,229 - 69,939,400 (-)NCBI
RefSeq Acc Id: XP_006228295   ⟸   XM_006228233
- Peptide Label: isoform X6
- UniProtKB: A0A9Y1V3F7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006228298   ⟸   XM_006228236
- Peptide Label: isoform X13
- UniProtKB: A0A9Y1V3F7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000067366   ⟸   ENSRNOT00000074352
RefSeq Acc Id: XP_038956583   ⟸   XM_039100655
- Peptide Label: isoform X16
- UniProtKB: A0A9Y1V3F7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038956579   ⟸   XM_039100651
- Peptide Label: isoform X7
- UniProtKB: A0A8I6AJE3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038956578   ⟸   XM_039100650
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038956576   ⟸   XM_039100648
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038956575   ⟸   XM_039100647
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038956577   ⟸   XM_039100649
- Peptide Label: isoform X3
- UniProtKB: M0RCP1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038956581   ⟸   XM_039100653
- Peptide Label: isoform X11
RefSeq Acc Id: XP_038956580   ⟸   XM_039100652
- Peptide Label: isoform X10
RefSeq Acc Id: XP_038956582   ⟸   XM_039100654
- Peptide Label: isoform X12
RefSeq Acc Id: ENSRNOP00000093241   ⟸   ENSRNOT00000114401
RefSeq Acc Id: XP_063133371   ⟸   XM_063277301
- Peptide Label: isoform X17
RefSeq Acc Id: XP_063133367   ⟸   XM_063277297
- Peptide Label: isoform X15
RefSeq Acc Id: XP_063133348   ⟸   XM_063277278
- Peptide Label: isoform X9
RefSeq Acc Id: XP_063133344   ⟸   XM_063277274
- Peptide Label: isoform X8
RefSeq Acc Id: XP_063133337   ⟸   XM_063277267
- Peptide Label: isoform X5
RefSeq Acc Id: XP_063133360   ⟸   XM_063277290
- Peptide Label: isoform X14
RefSeq Acc Id: XP_063133364   ⟸   XM_063277294
- Peptide Label: isoform X14
Protein Domains
Ig-like

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-M0RCP1-F1-model_v2 AlphaFold M0RCP1 1-806 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1566307 AgrOrtholog
BioCyc Gene G2FUF-60824 BioCyc
Ensembl Genes ENSRNOG00000046683 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000074352.2 UniProtKB/TrEMBL
  ENSRNOT00000114401.1 UniProtKB/TrEMBL
Gene3D-CATH 2.60.40.10 UniProtKB/TrEMBL
InterPro Ig-like_dom UniProtKB/TrEMBL
  Ig-like_dom_sf UniProtKB/TrEMBL
  Ig-like_fold UniProtKB/TrEMBL
  Ig_sub UniProtKB/TrEMBL
  Ig_sub2 UniProtKB/TrEMBL
  Immunoglobulin UniProtKB/TrEMBL
NCBI Gene 308350 ENTREZGENE
PANTHER LEUKOCYTE IMMUNOGLOBULIN-LIKE RECEPTOR SUBFAMILY A MEMBER 5 UniProtKB/TrEMBL
  MHC CLASS I NK CELL RECEPTOR UniProtKB/TrEMBL
Pfam Ig_2 UniProtKB/TrEMBL
  PF00047 UniProtKB/TrEMBL
PhenoGen Lilrb3 PhenoGen
PROSITE IG_LIKE UniProtKB/TrEMBL
RatGTEx ENSRNOG00000046683 RatGTEx
SMART IGc2 UniProtKB/TrEMBL
  SM00409 UniProtKB/TrEMBL
Superfamily-SCOP SSF48726 UniProtKB/TrEMBL
UniProt A0A8I6AJE3 ENTREZGENE, UniProtKB/TrEMBL
  A0A9Y1V3F7 ENTREZGENE, UniProtKB/TrEMBL
  M0RCP1 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-01-20 Lilrb3  leukocyte immunoglobulin like receptor B3  Lilrb3  leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2015-10-08 Lilrb3  leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3  RGD1566307  similar to PIRB1  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 RGD1566307  similar to PIRB1   RGD1566307_predicted  similar to PIRB1 (predicted)  'predicted' is removed 2292626 APPROVED
2006-03-07 RGD1566307_predicted  similar to PIRB1 (predicted)  LOC308350  similar to PIRB1  Symbol and Name status set to approved 1299863 APPROVED
2006-02-09 LOC308350  similar to PIRB1      Symbol and Name status set to provisional 70820 PROVISIONAL